eureka 0.0.1

data/.document

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+README.rdoc
+lib/**/*.rb
+bin/*
+features/**/*.feature
+LICENSE

data/.gitignore

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+## MAC OS
+.DS_Store
+
+## TEXTMATE
+*.tmproj
+tmtags
+
+## EMACS
+*~
+\#*
+.\#*
+
+## VIM
+*.swp
+
+## PROJECT::GENERAL
+coverage
+rdoc
+pkg
+
+## PROJECT::SPECIFIC

data/LICENSE

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+Copyright (c) 2009 Bjørn Arild Mæland
+
+Permission is hereby granted, free of charge, to any person obtaining
+a copy of this software and associated documentation files (the
+"Software"), to deal in the Software without restriction, including
+without limitation the rights to use, copy, modify, merge, publish,
+distribute, sublicense, and/or sell copies of the Software, and to
+permit persons to whom the Software is furnished to do so, subject to
+the following conditions:
+
+The above copyright notice and this permission notice shall be
+included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
+LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
+OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
+WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

data/README.rdoc

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+= Eureka
+
+JRuby wrapper for Weka 3 (http://www.cs.waikato.ac.nz/ml/weka/).
+
+Targets Weka 3.6.1, but it should work with earlier versions. Make sure to have
+weka.jar on your CLASSPATH.
+
+For examples of usage, look at the specs.
+
+Created by Bjørn Arild Mæland [github.com/Chrononaut]
+
+== Note on Patches/Pull Requests
+
+* Fork the project.
+* Make your feature addition or bug fix.
+* Add tests for it. This is important so I don't break it in a
+  future version unintentionally.
+* Commit, do not mess with rakefile, version, or history.
+  (if you want to have your own version, that is fine but
+   bump version in a commit by itself I can ignore when I pull)
+* Send me a pull request. Bonus points for topic branches.
+
+== Copyright
+
+Copyright (c) 2009 Bjørn Arild Mæland. See LICENSE for details.

data/Rakefile

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+# -*- coding: utf-8 -*-
+require "rake"
+require "spec/rake/spectask"
+require 'jeweler'
+
+Jeweler::Tasks.new do |gem|
+  gem.name = "eureka"
+  gem.version = "0.0.1"
+  gem.summary = "Use Weka from JRuby"
+  gem.description = "Weka wrapper for JRuby"
+  gem.email = "bjorn.maeland@gmail.com"
+  gem.homepage = "http://github.com/Chrononaut/eureka"
+  gem.authors = ["Bjørn Arild Mæland"]
+  gem.add_development_dependency "rspec", ">= 1.2.9"
+end
+
+Jeweler::GemcutterTasks.new
+
+Spec::Rake::SpecTask.new(:spec) do |spec|
+  spec.libs << 'lib' << 'spec'
+  spec.spec_files = FileList['spec/*_spec.rb']
+end
+
+Spec::Rake::SpecTask.new(:rcov) do |spec|
+  spec.libs << 'lib' << 'spec'
+  spec.pattern = 'spec/*_spec.rb'
+  spec.rcov = true
+end
+
+task :default => :spec
+
+require 'rake/rdoctask'
+Rake::RDocTask.new do |rdoc|
+  version = File.exist?('VERSION') ? File.read('VERSION') : ""
+
+  rdoc.rdoc_dir = 'rdoc'
+  rdoc.title = "eureka #{version}"
+  rdoc.rdoc_files.include('README*')
+  rdoc.rdoc_files.include('lib/**/*.rb')
+end

data/lib/eureka.rb

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+require "java"
+
+# weka.jar must be on your CLASSPATH
+require "weka.jar"
+
+$:.unshift(here = File.dirname(__FILE__))
+
+require "eureka/core"

data/lib/eureka/core.rb

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+# Core extensions
+class Array
+  def to_fast_vector
+    FastVector.new(self)
+  end
+end
+
+# Eureka
+module Eureka
+  import "weka.core.Attribute"
+  import "weka.core.FastVector"
+  import "weka.core.Instances"
+end
+
+module Java::WekaCore
+
+  class Attribute
+    alias :[] :value
+  end
+
+  class FastVector
+
+    include Enumerable
+
+    def initialize(int_or_array=0)
+      if int_or_array.kind_of?(Fixnum)
+        super(int_or_array)
+      else
+        super(int_or_array.size)
+        int_or_array.each { |arg| self.add_element(arg) }
+      end
+    end
+
+    alias :length :size
+    alias :first :first_element
+    alias :last :last_element
+    alias :<< :add_element
+    alias :[] :element_at
+    alias :include? :contains
+
+    def each
+      size.times { |i| yield self[i] }
+    end
+
+  end
+
+  class Instances
+
+    include Enumerable
+
+    class << self
+      # Reads in instances using the standard Weka ARFF format
+      def from_arff(path)
+        data = self.new(java.io.BufferedReader.new(java.io.FileReader.new(path)))
+        data.set_class_index(data.num_attributes - 1)
+        return data
+      end
+
+      # http://weka.sourceforge.net/doc/weka/core/converters/C45Loader.html
+      def from_c45
+        raise
+      end
+
+      # http://weka.sourceforge.net/doc/weka/core/converters/CSVLoader.html
+      def from_csv
+        raise
+      end
+    end
+
+    alias :<< :add
+    alias :[] :instance
+
+    def each
+      num_instances.times { |i| yield self[i] }
+    end
+
+  end
+
+end

data/spec/core_spec.rb

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+require File.expand_path(File.dirname(__FILE__) + '/spec_helper')
+
+describe "Weka Core" do
+  describe "FastVector" do
+    before(:all) do
+      @fv = FastVector.new(("a".."z").to_a)
+    end
+
+    it "should have Ruby-like aliases"do
+      @fv.length.should == @fv.size
+      @fv.first.should == @fv.first_element
+      @fv.last.should == @fv.last_element
+    end
+
+    it "should instanciate from an array" do
+      FastVector.new(("a".."z").to_a).length.should == 26
+    end
+
+    it "should know if it includes a specific element" do
+      @fv.include?("a").should be_true
+      @fv.include?("1").should be_false
+      @fv[0].should == "a"
+    end
+  end
+end

data/spec/data/stock_testing_data.arff

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+@relation stock
+
+@attribute percent_change_since_open real
+@attribute percent_change_from_day_low real
+@attribute percent_change_from_day_high real
+@attribute action {buy, sell, hold}
+
+@data
+-0.21,0.05,-0.2,hold
+-2.1,0.1,-2.3,sell
+0.23,0.18,-0.04,buy
+-0.24,0.16,-0.15,hold
+-2.5,-0.1,-2.2,sell
+0.31,0.29,-0.1,buy
+-0.19,0.04,-0.18,hold
+-2.7,0.4,-2.4,sell
+0.21,0.28,-0.08,buy

data/spec/data/stock_training_data.arff

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+@relation stock
+
+@attribute percent_change_since_open real
+@attribute percent_change_from_day_low real
+@attribute percent_change_from_day_high real
+@attribute action {buy, sell, hold}
+
+@data
+-0.2,0.1,-0.22,hold
+-2.2,0.0,-2.5,sell
+0.2,0.21,-0.01,buy
+-0.22,0.12,-0.25,hold
+-2.0,0.0,-2.1,sell
+0.28,0.26,-0.04,buy
+-0.12,0.08,-0.14,hold
+-2.6,0.1,-2.6,sell
+0.24,0.25,-0.03,buy

data/spec/data/xor.arff

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+@relation xor
+
+@attribute x {TRUE, FALSE}
+@attribute y {TRUE, FALSE}
+@attribute xor {TRUE, FALSE}
+
+@data
+FALSE,FALSE,FALSE
+FALSE,TRUE,TRUE
+TRUE,FALSE,TRUE
+TRUE,TRUE,FALSE
+FALSE,FALSE,FALSE
+FALSE,TRUE,TRUE
+TRUE,FALSE,TRUE
+TRUE,TRUE,FALSE
+FALSE,FALSE,FALSE
+FALSE,TRUE,TRUE
+TRUE,FALSE,TRUE
+TRUE,TRUE,FALSE
+FALSE,FALSE,FALSE
+FALSE,TRUE,TRUE
+TRUE,FALSE,TRUE
+TRUE,TRUE,FALSE
+FALSE,FALSE,FALSE
+FALSE,TRUE,TRUE
+TRUE,FALSE,TRUE
+TRUE,TRUE,FALSE
+FALSE,FALSE,FALSE
+FALSE,TRUE,TRUE
+TRUE,FALSE,TRUE
+TRUE,TRUE,FALSE
+FALSE,FALSE,FALSE
+FALSE,TRUE,TRUE
+TRUE,FALSE,TRUE
+TRUE,TRUE,FALSE
+FALSE,FALSE,FALSE
+FALSE,TRUE,TRUE
+TRUE,FALSE,TRUE
+TRUE,TRUE,FALSE
+FALSE,FALSE,FALSE
+FALSE,TRUE,TRUE
+TRUE,FALSE,TRUE
+TRUE,TRUE,FALSE
+FALSE,FALSE,FALSE
+FALSE,TRUE,TRUE
+TRUE,FALSE,TRUE
+TRUE,TRUE,FALSE

data/spec/spec.opts

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+--color

data/spec/spec_helper.rb

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+$LOAD_PATH.unshift(File.dirname(__FILE__))
+$LOAD_PATH.unshift(File.join(File.dirname(__FILE__), '..', 'lib'))
+
+require 'eureka'
+require "spec"
+require 'spec/autorun'
+
+Spec::Runner.configure do |config|
+
+end
+
+include Eureka

data/spec/stock_spec.rb

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+require File.expand_path(File.dirname(__FILE__) + '/spec_helper')
+
+import "weka.classifiers.meta.FilteredClassifier"
+import "weka.classifiers.trees.J48"
+import "weka.filters.unsupervised.attribute.Remove"
+
+describe "Stock data example" do
+
+  before(:all) do
+    @training_data = Instances.from_arff(File.dirname(__FILE__) +
+                                         "/data/stock_training_data.arff")
+    @testing_data  = Instances.from_arff(File.dirname(__FILE__) +
+                                         "/data/stock_testing_data.arff")
+  end
+
+  it "should know the number of attributes and instances in model" do
+    @training_data.num_attributes.should == 4
+    @training_data.num_instances.should  == 9
+  end
+
+  it "should build and test a classifier" do
+
+    rm = Remove.new                    # Filter for removing samples
+    rm.set_attribute_indices("1")      # Remove 1st attribute
+
+    fc = FilteredClassifier.new
+    fc.set_filter(rm)
+    fc.set_classifier(J48.new)         # A classifier for decision trees
+    fc.build_classifier(@training_data) # Train the classifier
+
+    # Test using stock_testing_data.arff:
+    @testing_data.to_a[0..2].each do |instance|
+      predicted = fc.classify_instance(instance).to_i
+      given     = instance.class_value.to_i
+      given.should == predicted
+      #print "given value: #{@testing_data.class_attribute[given]}"
+      #puts  ". predicted value: #{@testing_data.class_attribute[predicted]}"
+    end
+
+  end
+
+end

data/spec/xor_spec.rb

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+require File.expand_path(File.dirname(__FILE__) + '/spec_helper')
+
+import "weka.classifiers.lazy.IBk"
+
+describe "XOR example" do
+
+  before(:all) do
+    @training_data = Instances.from_arff(File.dirname(__FILE__) +
+                                         "/data/xor.arff")
+  end
+
+  it "should build and test a classifier" do
+    # Uses the IBk K-nearest neighbours classifier to solve the XOR problem.
+    # http://weka.sourceforge.net/doc/weka/classifiers/lazy/IBk.html
+    ibk = IBk.new
+
+    ibk.build_classifier(@training_data)
+
+    # FALSE, FALSE
+    @training_data.class_attribute[ibk.classify_instance(@training_data[0])].should ==
+      "FALSE"
+
+    # FALSE, TRUE
+    @training_data.class_attribute[ibk.classify_instance(@training_data[1])].should ==
+      "TRUE"
+  end
+
+end

metadata

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+--- !ruby/object:Gem::Specification 
+required_ruby_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - '>='
+    - !ruby/object:Gem::Version 
+      version: "0"
+  version: 
+email: bjorn.maeland@gmail.com
+cert_chain: []
+
+summary: Use Weka from JRuby
+post_install_message: 
+extra_rdoc_files: 
+- LICENSE
+- README.rdoc
+homepage: http://github.com/Chrononaut/eureka
+signing_key: 
+name: eureka
+rdoc_options: 
+- --charset=UTF-8
+rubyforge_project: 
+autorequire: 
+licenses: []
+
+executables: []
+
+description: Weka wrapper for JRuby
+specification_version: 3
+default_executable: 
+files: 
+- .document
+- .gitignore
+- LICENSE
+- README.rdoc
+- Rakefile
+- lib/eureka.rb
+- lib/eureka/core.rb
+- spec/core_spec.rb
+- spec/data/stock_testing_data.arff
+- spec/data/stock_training_data.arff
+- spec/data/xor.arff
+- spec/spec.opts
+- spec/spec_helper.rb
+- spec/stock_spec.rb
+- spec/xor_spec.rb
+required_rubygems_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - '>='
+    - !ruby/object:Gem::Version 
+      version: "0"
+  version: 
+extensions: []
+
+rubygems_version: 1.3.5
+requirements: []
+
+authors: 
+- "Bj\xc3\xb8rn Arild M\xc3\xa6land"
+date: 2009-10-26 23:00:00 +00:00
+platform: ruby
+test_files: 
+- spec/spec_helper.rb
+- spec/xor_spec.rb
+- spec/core_spec.rb
+- spec/stock_spec.rb
+version: !ruby/object:Gem::Version 
+  version: 0.0.1
+require_paths: 
+- lib
+dependencies: 
+- !ruby/object:Gem::Dependency 
+  version_requirements: !ruby/object:Gem::Requirement 
+    requirements: 
+    - - '>='
+      - !ruby/object:Gem::Version 
+        version: 1.2.9
+    version: 
+  type: :development
+  version_requirement: 
+  name: rspec
+bindir: bin
+has_rdoc: true