etna 0.1.43 → 0.1.46

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Files changed (37) hide show
  1. checksums.yaml +4 -4
  2. data/bin/etna +12 -1
  3. data/etna.completion +36788 -1
  4. data/lib/commands.rb +118 -0
  5. data/lib/etna/application.rb +13 -16
  6. data/lib/etna/auth.rb +37 -14
  7. data/lib/etna/clients/janus/client.rb +17 -18
  8. data/lib/etna/clients/janus/models.rb +52 -0
  9. data/lib/etna/clients/magma/client.rb +41 -0
  10. data/lib/etna/clients/magma/formatting/models_csv.rb +14 -4
  11. data/lib/etna/clients/magma/models.rb +19 -8
  12. data/lib/etna/clients/magma/workflows/create_project_workflow.rb +1 -1
  13. data/lib/etna/clients/magma/workflows/json_validators.rb +5 -5
  14. data/lib/etna/clients/magma/workflows/model_synchronization_workflow.rb +9 -9
  15. data/lib/etna/clients/metis/client.rb +7 -2
  16. data/lib/etna/clients/metis/models.rb +6 -3
  17. data/lib/etna/clients/metis/workflows/metis_download_workflow.rb +1 -1
  18. data/lib/etna/clients/metis/workflows/sync_metis_data_workflow.rb +23 -0
  19. data/lib/etna/clients/metis/workflows/walk_metis_diff_workflow.rb +95 -0
  20. data/lib/etna/clients/metis/workflows/walk_metis_workflow.rb +31 -0
  21. data/lib/etna/clients/metis/workflows.rb +2 -0
  22. data/lib/etna/controller.rb +48 -1
  23. data/lib/etna/cwl.rb +8 -0
  24. data/lib/etna/environment_variables.rb +50 -0
  25. data/lib/etna/filesystem.rb +2 -0
  26. data/lib/etna/injection.rb +57 -0
  27. data/lib/etna/janus_utils.rb +55 -0
  28. data/lib/etna/permissions.rb +104 -0
  29. data/lib/etna/redirect.rb +36 -0
  30. data/lib/etna/route.rb +54 -5
  31. data/lib/etna/server.rb +13 -1
  32. data/lib/etna/spec/auth.rb +11 -0
  33. data/lib/etna/spec/vcr.rb +28 -3
  34. data/lib/etna/test_auth.rb +25 -1
  35. data/lib/etna/user.rb +4 -26
  36. data/lib/etna.rb +4 -0
  37. metadata +13 -6
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
1
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  ---
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  SHA256:
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- metadata.gz: 2e30f0d83fdf8f5781f723080ddd042d371f3131a415c85ec441b56178cef27c
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- data.tar.gz: a543a3464ca34e0d6daedddbf702cf067f7dfdcbdc972e4e9a9a626118d5fbbd
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+ metadata.gz: bf5d46399bfc782d537d246013aeb1cc16bf3b56c8040f84baa92a36c5949fda
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+ data.tar.gz: 32fabdd9b634b7a0026b8277a55635c16be52e30a60cd7568e8c68938d44d221
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  SHA512:
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- metadata.gz: d11b9f2882e7499decb4854c5c399bce24e31b14ff52c83006708bd4f83706e4a754d2c96838241b1885ae2ad4f2eb360a0f815b38f5009f1a75fb4fe7246275
7
- data.tar.gz: 3447fa61b285fdbe78e5e0646b36d489f3fd2677cce2415ebe001f8b691ddc281b9514a12bd9424ed9023f0b58609482edba77156066377ab1840e06bf359a5a
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+ metadata.gz: f7b48496c8b36afe4aa6f08ef911913bfee6233b3ce50f17e723b38aef03f3aa2b7c9ee6beab94748fa42ff67bfcf68bb73145962ce102d79593055025c439d4
7
+ data.tar.gz: 4f074e556b455f2e6a2e36b30212b781316f198acfa99879059c803d2254ae701bd784adf515e1fb3427734a299546d42a182f08908645ff340ae5a9581dcb91
data/bin/etna CHANGED
@@ -12,7 +12,18 @@ require_relative '../lib/commands'
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  config = if File.exists?(EtnaApp.config_file_path)
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  YAML.load(File.read(EtnaApp.config_file_path))
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  else
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- {}
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+ {
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+ production: {
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+ docker: { default_tag: "production" },
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+ magma: { host: "https://magma.ucsf.edu" },
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+ metis: { host: "https://metis.ucsf.edu" },
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+ janus: { host: "https://janus.ucsf.edu" },
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+ timur: { host: "https://timur.ucsf.edu" },
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+ polyphemus: { host: "https://polyphemus.ucsf.edu" },
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+ ignore_ssl: false,
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+ auth_redirect: "https://janus.ucsf.edu"
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+ }
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+ }
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  end
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  EtnaApp.instance.run_command(config, *ARGV)