etna 0.1.42 → 0.1.45
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- checksums.yaml +4 -4
- data/bin/etna +12 -1
- data/etna.completion +36788 -1
- data/lib/commands.rb +118 -0
- data/lib/etna/application.rb +13 -16
- data/lib/etna/auth.rb +37 -14
- data/lib/etna/clients/janus/client.rb +17 -18
- data/lib/etna/clients/janus/models.rb +52 -0
- data/lib/etna/clients/magma/client.rb +41 -0
- data/lib/etna/clients/magma/models.rb +8 -7
- data/lib/etna/clients/magma/workflows/create_project_workflow.rb +1 -1
- data/lib/etna/clients/magma/workflows/json_validators.rb +0 -4
- data/lib/etna/clients/magma/workflows/model_synchronization_workflow.rb +2 -2
- data/lib/etna/clients/metis/client.rb +7 -2
- data/lib/etna/clients/metis/models.rb +6 -3
- data/lib/etna/clients/metis/workflows/metis_download_workflow.rb +1 -1
- data/lib/etna/clients/metis/workflows/walk_metis_diff_workflow.rb +95 -0
- data/lib/etna/clients/metis/workflows/walk_metis_workflow.rb +31 -0
- data/lib/etna/clients/metis/workflows.rb +2 -0
- data/lib/etna/controller.rb +48 -1
- data/lib/etna/cwl.rb +8 -0
- data/lib/etna/environment_variables.rb +50 -0
- data/lib/etna/injection.rb +57 -0
- data/lib/etna/janus_utils.rb +55 -0
- data/lib/etna/permissions.rb +104 -0
- data/lib/etna/redirect.rb +36 -0
- data/lib/etna/route.rb +51 -2
- data/lib/etna/spec/auth.rb +11 -0
- data/lib/etna/spec/vcr.rb +28 -3
- data/lib/etna/test_auth.rb +22 -1
- data/lib/etna/user.rb +4 -26
- data/lib/etna.rb +4 -0
- metadata +13 -6
checksums.yaml
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
---
|
|
2
2
|
SHA256:
|
|
3
|
-
metadata.gz:
|
|
4
|
-
data.tar.gz:
|
|
3
|
+
metadata.gz: 217bba41b5188f5d0e2349ba31dcb6f84477a3dcb36d04fd598977e814190ae8
|
|
4
|
+
data.tar.gz: 758215abeb4ce074eb9dc6dd0313a3d271f2875f4071314cc7db30e9c4f19ad6
|
|
5
5
|
SHA512:
|
|
6
|
-
metadata.gz:
|
|
7
|
-
data.tar.gz:
|
|
6
|
+
metadata.gz: 52f1098ebc84e4fef32e8230246c09415adaf010bc748231fbcb3062f66aa7b43d2a34e78c99f43d3186f4d856d2f80447da72f15ccd47b0445936c5658f4d77
|
|
7
|
+
data.tar.gz: 9c3feccc37d002e3493052aee8eccf3c6fedcfbf79a7251eda1a68d1324f4e05908e4dfc5d7c20996be34c448c739706e0e6a38fbc5a582918ebf0e4ea7859fc
|
data/bin/etna
CHANGED
|
@@ -12,7 +12,18 @@ require_relative '../lib/commands'
|
|
|
12
12
|
config = if File.exists?(EtnaApp.config_file_path)
|
|
13
13
|
YAML.load(File.read(EtnaApp.config_file_path))
|
|
14
14
|
else
|
|
15
|
-
{
|
|
15
|
+
{
|
|
16
|
+
production: {
|
|
17
|
+
docker: { default_tag: "production" },
|
|
18
|
+
magma: { host: "https://magma.ucsf.edu" },
|
|
19
|
+
metis: { host: "https://metis.ucsf.edu" },
|
|
20
|
+
janus: { host: "https://janus.ucsf.edu" },
|
|
21
|
+
timur: { host: "https://timur.ucsf.edu" },
|
|
22
|
+
polyphemus: { host: "https://polyphemus.ucsf.edu" },
|
|
23
|
+
ignore_ssl: false,
|
|
24
|
+
auth_redirect: "https://janus.ucsf.edu"
|
|
25
|
+
}
|
|
26
|
+
}
|
|
16
27
|
end
|
|
17
28
|
|
|
18
29
|
EtnaApp.instance.run_command(config, *ARGV)
|