eps 0.3.0 → 0.3.1
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- checksums.yaml +4 -4
- data/CHANGELOG.md +12 -5
- data/README.md +34 -0
- data/lib/eps.rb +19 -10
- data/lib/eps/base_estimator.rb +35 -129
- data/lib/eps/data_frame.rb +7 -1
- data/lib/eps/evaluators/linear_regression.rb +1 -1
- data/lib/eps/label_encoder.rb +7 -3
- data/lib/eps/lightgbm.rb +36 -76
- data/lib/eps/linear_regression.rb +26 -79
- data/lib/eps/metrics.rb +24 -12
- data/lib/eps/model.rb +6 -6
- data/lib/eps/naive_bayes.rb +2 -139
- data/lib/eps/pmml.rb +14 -0
- data/lib/eps/pmml/generator.rb +422 -0
- data/lib/eps/pmml/loader.rb +241 -0
- data/lib/eps/version.rb +1 -1
- metadata +7 -5
- data/lib/eps/pmml_generators/lightgbm.rb +0 -187
data/lib/eps/version.rb
CHANGED
metadata
CHANGED
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@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: eps
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3
3
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version: !ruby/object:Gem::Version
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4
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-
version: 0.3.
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4
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+
version: 0.3.1
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5
5
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platform: ruby
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6
6
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authors:
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7
7
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- Andrew Kane
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8
8
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autorequire:
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9
9
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bindir: bin
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10
10
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cert_chain: []
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11
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-
date: 2019-
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11
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+
date: 2019-12-06 00:00:00.000000000 Z
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12
12
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dependencies:
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13
13
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- !ruby/object:Gem::Dependency
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14
14
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name: lightgbm
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@@ -16,14 +16,14 @@ dependencies:
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16
16
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requirements:
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17
17
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- - ">="
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18
18
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- !ruby/object:Gem::Version
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19
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-
version: 0.1.
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19
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+
version: 0.1.7
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20
20
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type: :runtime
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21
21
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prerelease: false
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22
22
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version_requirements: !ruby/object:Gem::Requirement
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23
23
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requirements:
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24
24
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- - ">="
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25
25
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- !ruby/object:Gem::Version
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26
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-
version: 0.1.
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26
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+
version: 0.1.7
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27
27
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- !ruby/object:Gem::Dependency
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28
28
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name: nokogiri
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29
29
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requirement: !ruby/object:Gem::Requirement
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@@ -117,7 +117,9 @@ files:
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117
117
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- lib/eps/metrics.rb
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|
118
118
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- lib/eps/model.rb
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|
119
119
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- lib/eps/naive_bayes.rb
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|
120
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-
- lib/eps/
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120
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+
- lib/eps/pmml.rb
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|
121
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+
- lib/eps/pmml/generator.rb
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122
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+
- lib/eps/pmml/loader.rb
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121
123
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- lib/eps/statistics.rb
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122
124
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- lib/eps/text_encoder.rb
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123
125
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- lib/eps/utils.rb
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@@ -1,187 +0,0 @@
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1
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-
module Eps
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2
|
-
module PmmlGenerators
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3
|
-
module LightGBM
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4
|
-
private
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5
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-
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6
|
-
def generate_pmml
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|
7
|
-
feature_importance = @feature_importance
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|
8
|
-
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|
9
|
-
data_fields = {}
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|
10
|
-
data_fields[@target] = @labels if @labels
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|
11
|
-
@features.each_with_index do |(k, type), i|
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12
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-
# TODO remove zero importance features
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13
|
-
if type == "categorical"
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14
|
-
data_fields[k] = @label_encoders[k].labels.keys
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15
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-
else
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16
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-
data_fields[k] = nil
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17
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-
end
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18
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-
end
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19
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-
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|
20
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-
build_pmml(data_fields) do |xml|
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21
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-
function_name = @objective == "regression" ? "regression" : "classification"
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22
|
-
xml.MiningModel(functionName: function_name, algorithmName: "LightGBM") do
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23
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-
xml.MiningSchema do
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24
|
-
xml.MiningField(name: @target, usageType: "target")
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25
|
-
@features.keys.each_with_index do |k, i|
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26
|
-
# next if feature_importance[i] == 0
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|
27
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-
# TODO add importance, but need to handle text features
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28
|
-
xml.MiningField(name: k) #, importance: feature_importance[i].to_f, missingValueTreatment: "asIs")
|
|
29
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-
end
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|
30
|
-
end
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31
|
-
pmml_local_transformations(xml)
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32
|
-
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33
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-
case @objective
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34
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-
when "regression"
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35
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-
xml_segmentation(xml, @trees)
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36
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-
when "binary"
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37
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-
xml.Segmentation(multipleModelMethod: "modelChain") do
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38
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-
xml.Segment(id: 1) do
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39
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xml.True
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40
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-
xml.MiningModel(functionName: "regression") do
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41
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-
xml.MiningSchema do
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42
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-
@features.each do |k, _|
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43
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-
xml.MiningField(name: k)
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44
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-
end
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45
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-
end
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46
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-
xml.Output do
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47
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-
xml.OutputField(name: "lgbmValue", optype: "continuous", dataType: "double", feature: "predictedValue", isFinalResult: false) do
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48
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-
xml.Apply(function: "/") do
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|
49
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-
xml.Constant(dataType: "double") do
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|
50
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-
1.0
|
|
51
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-
end
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52
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-
xml.Apply(function: "+") do
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53
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-
xml.Constant(dataType: "double") do
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54
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-
1.0
|
|
55
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-
end
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56
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-
xml.Apply(function: "exp") do
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57
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-
xml.Apply(function: "*") do
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58
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-
xml.Constant(dataType: "double") do
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59
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-
-1.0
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60
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-
end
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61
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-
xml.FieldRef(field: "lgbmValue")
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62
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-
end
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63
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-
end
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64
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-
end
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65
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-
end
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66
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-
end
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|
67
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-
end
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|
68
|
-
xml_segmentation(xml, @trees)
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69
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-
end
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|
70
|
-
end
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|
71
|
-
xml.Segment(id: 2) do
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|
72
|
-
xml.True
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|
73
|
-
xml.RegressionModel(functionName: "classification", normalizationMethod: "none") do
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|
74
|
-
xml.MiningSchema do
|
|
75
|
-
xml.MiningField(name: @target, usageType: "target")
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|
76
|
-
xml.MiningField(name: "transformedLgbmValue")
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|
77
|
-
end
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78
|
-
xml.Output do
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|
79
|
-
@labels.each do |label|
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|
80
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-
xml.OutputField(name: "probability(#{label})", optype: "continuous", dataType: "double", feature: "probability", value: label)
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|
81
|
-
end
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|
82
|
-
end
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|
83
|
-
xml.RegressionTable(intercept: 0.0, targetCategory: @labels.last) do
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84
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-
xml.NumericPredictor(name: "transformedLgbmValue", coefficient: "1.0")
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85
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-
end
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86
|
-
xml.RegressionTable(intercept: 0.0, targetCategory: @labels.first)
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87
|
-
end
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|
88
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-
end
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|
89
|
-
end
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|
90
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-
else # multiclass
|
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91
|
-
xml.Segmentation(multipleModelMethod: "modelChain") do
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92
|
-
n = @trees.size / @labels.size
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|
93
|
-
@trees.each_slice(n).each_with_index do |trees, idx|
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|
94
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-
xml.Segment(id: idx + 1) do
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|
95
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-
xml.True
|
|
96
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-
xml.MiningModel(functionName: "regression") do
|
|
97
|
-
xml.MiningSchema do
|
|
98
|
-
@features.each do |k, _|
|
|
99
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-
xml.MiningField(name: k)
|
|
100
|
-
end
|
|
101
|
-
end
|
|
102
|
-
xml.Output do
|
|
103
|
-
xml.OutputField(name: "lgbmValue(#{@labels[idx]})", optype: "continuous", dataType: "double", feature: "predictedValue", isFinalResult: false)
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|
104
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-
end
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105
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-
xml_segmentation(xml, trees)
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|
106
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-
end
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|
107
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-
end
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|
108
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-
end
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|
109
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-
xml.Segment(id: @labels.size + 1) do
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110
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-
xml.True
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111
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-
xml.RegressionModel(functionName: "classification", normalizationMethod: "softmax") do
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112
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-
xml.MiningSchema do
|
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113
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-
xml.MiningField(name: @target, usageType: "target")
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114
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-
@labels.each do |label|
|
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115
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-
xml.MiningField(name: "lgbmValue(#{label})")
|
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116
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-
end
|
|
117
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-
end
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118
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-
xml.Output do
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119
|
-
@labels.each do |label|
|
|
120
|
-
xml.OutputField(name: "probability(#{label})", optype: "continuous", dataType: "double", feature: "probability", value: label)
|
|
121
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-
end
|
|
122
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-
end
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123
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-
@labels.each do |label|
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124
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-
xml.RegressionTable(intercept: 0.0, targetCategory: label) do
|
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125
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-
xml.NumericPredictor(name: "lgbmValue(#{label})", coefficient: "1.0")
|
|
126
|
-
end
|
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127
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-
end
|
|
128
|
-
end
|
|
129
|
-
end
|
|
130
|
-
end
|
|
131
|
-
end
|
|
132
|
-
end
|
|
133
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-
end
|
|
134
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-
end
|
|
135
|
-
|
|
136
|
-
def xml_segmentation(xml, trees)
|
|
137
|
-
xml.Segmentation(multipleModelMethod: "sum") do
|
|
138
|
-
trees.each_with_index do |node, i|
|
|
139
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-
xml.Segment(id: i + 1) do
|
|
140
|
-
xml.True
|
|
141
|
-
xml.TreeModel(functionName: "regression", missingValueStrategy: "none", noTrueChildStrategy: "returnLastPrediction", splitCharacteristic: "multiSplit") do
|
|
142
|
-
xml.MiningSchema do
|
|
143
|
-
node_fields(node).uniq.each do |k|
|
|
144
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-
xml.MiningField(name: display_field(k))
|
|
145
|
-
end
|
|
146
|
-
end
|
|
147
|
-
node_pmml(node, xml)
|
|
148
|
-
end
|
|
149
|
-
end
|
|
150
|
-
end
|
|
151
|
-
end
|
|
152
|
-
end
|
|
153
|
-
|
|
154
|
-
def node_fields(node)
|
|
155
|
-
fields = []
|
|
156
|
-
fields << node.field if node.predicate
|
|
157
|
-
node.children.each do |n|
|
|
158
|
-
fields.concat(node_fields(n))
|
|
159
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-
end
|
|
160
|
-
fields
|
|
161
|
-
end
|
|
162
|
-
|
|
163
|
-
def node_pmml(node, xml)
|
|
164
|
-
xml.Node(score: node.score) do
|
|
165
|
-
if node.predicate.nil?
|
|
166
|
-
xml.True
|
|
167
|
-
elsif node.operator == "in"
|
|
168
|
-
xml.SimpleSetPredicate(field: display_field(node.field), booleanOperator: "isIn") do
|
|
169
|
-
xml.Array(type: "string") do
|
|
170
|
-
xml.text node.value.map { |v| escape_element(v) }.join(" ")
|
|
171
|
-
end
|
|
172
|
-
end
|
|
173
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-
else
|
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174
|
-
xml.SimplePredicate(field: display_field(node.field), operator: node.operator, value: node.value)
|
|
175
|
-
end
|
|
176
|
-
node.children.each do |n|
|
|
177
|
-
node_pmml(n, xml)
|
|
178
|
-
end
|
|
179
|
-
end
|
|
180
|
-
end
|
|
181
|
-
|
|
182
|
-
def escape_element(v)
|
|
183
|
-
"\"#{v.gsub("\"", "\\\"")}\""
|
|
184
|
-
end
|
|
185
|
-
end
|
|
186
|
-
end
|
|
187
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-
end
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