embulk-input-bigquery_extract_files 0.0.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +7 -0
- data/.gitignore +16 -0
- data/LICENSE.txt +21 -0
- data/README.md +92 -0
- data/build.gradle +102 -0
- data/config.yml +30 -0
- data/config/checkstyle/checkstyle.xml +128 -0
- data/config/checkstyle/default.xml +108 -0
- data/gradle/wrapper/gradle-wrapper.jar +0 -0
- data/gradle/wrapper/gradle-wrapper.properties +5 -0
- data/gradlew +172 -0
- data/gradlew.bat +84 -0
- data/lib/embulk/input/bigquery_extract_files.rb +3 -0
- data/src/main/java/org/embulk/input/bigquery_export_gcs/BigqueryExportGcsFileInputPlugin.java +340 -0
- data/src/main/java/org/embulk/input/bigquery_export_gcs/BigqueryExportUtils.java +444 -0
- data/src/test/java/org/embulk/input/bigquery_export_gcs/TestGoogleCloudAccessData.java +33 -0
- data/src/test/java/org/embulk/input/bigquery_export_gcs/TestPluginFunctions.java +56 -0
- data/src/test/java/org/embulk/input/bigquery_export_gcs/UnitTestInitializer.java +86 -0
- metadata +101 -0
Binary file
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data/gradlew
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#!/usr/bin/env sh
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##############################################################################
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##
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## Gradle start up script for UN*X
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##
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##############################################################################
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# Attempt to set APP_HOME
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# Resolve links: $0 may be a link
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PRG="$0"
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# Need this for relative symlinks.
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while [ -h "$PRG" ] ; do
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ls=`ls -ld "$PRG"`
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link=`expr "$ls" : '.*-> \(.*\)$'`
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if expr "$link" : '/.*' > /dev/null; then
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PRG="$link"
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else
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PRG=`dirname "$PRG"`"/$link"
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fi
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done
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SAVED="`pwd`"
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cd "`dirname \"$PRG\"`/" >/dev/null
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APP_HOME="`pwd -P`"
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cd "$SAVED" >/dev/null
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APP_NAME="Gradle"
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APP_BASE_NAME=`basename "$0"`
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# Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
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DEFAULT_JVM_OPTS=""
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# Use the maximum available, or set MAX_FD != -1 to use that value.
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MAX_FD="maximum"
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warn () {
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echo "$*"
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}
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die () {
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echo
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echo "$*"
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echo
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exit 1
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}
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# OS specific support (must be 'true' or 'false').
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cygwin=false
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msys=false
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darwin=false
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nonstop=false
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case "`uname`" in
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CYGWIN* )
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cygwin=true
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;;
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Darwin* )
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darwin=true
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;;
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MINGW* )
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msys=true
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;;
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NONSTOP* )
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nonstop=true
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;;
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esac
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CLASSPATH=$APP_HOME/gradle/wrapper/gradle-wrapper.jar
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# Determine the Java command to use to start the JVM.
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if [ -n "$JAVA_HOME" ] ; then
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if [ -x "$JAVA_HOME/jre/sh/java" ] ; then
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# IBM's JDK on AIX uses strange locations for the executables
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JAVACMD="$JAVA_HOME/jre/sh/java"
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else
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JAVACMD="$JAVA_HOME/bin/java"
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fi
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if [ ! -x "$JAVACMD" ] ; then
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die "ERROR: JAVA_HOME is set to an invalid directory: $JAVA_HOME
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Please set the JAVA_HOME variable in your environment to match the
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location of your Java installation."
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fi
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else
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JAVACMD="java"
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which java >/dev/null 2>&1 || die "ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
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Please set the JAVA_HOME variable in your environment to match the
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location of your Java installation."
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fi
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# Increase the maximum file descriptors if we can.
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if [ "$cygwin" = "false" -a "$darwin" = "false" -a "$nonstop" = "false" ] ; then
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MAX_FD_LIMIT=`ulimit -H -n`
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if [ $? -eq 0 ] ; then
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if [ "$MAX_FD" = "maximum" -o "$MAX_FD" = "max" ] ; then
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MAX_FD="$MAX_FD_LIMIT"
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fi
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ulimit -n $MAX_FD
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if [ $? -ne 0 ] ; then
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warn "Could not set maximum file descriptor limit: $MAX_FD"
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fi
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else
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warn "Could not query maximum file descriptor limit: $MAX_FD_LIMIT"
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fi
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fi
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# For Darwin, add options to specify how the application appears in the dock
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if $darwin; then
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GRADLE_OPTS="$GRADLE_OPTS \"-Xdock:name=$APP_NAME\" \"-Xdock:icon=$APP_HOME/media/gradle.icns\""
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fi
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# For Cygwin, switch paths to Windows format before running java
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if $cygwin ; then
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APP_HOME=`cygpath --path --mixed "$APP_HOME"`
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CLASSPATH=`cygpath --path --mixed "$CLASSPATH"`
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JAVACMD=`cygpath --unix "$JAVACMD"`
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# We build the pattern for arguments to be converted via cygpath
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ROOTDIRSRAW=`find -L / -maxdepth 1 -mindepth 1 -type d 2>/dev/null`
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SEP=""
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for dir in $ROOTDIRSRAW ; do
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ROOTDIRS="$ROOTDIRS$SEP$dir"
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SEP="|"
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done
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OURCYGPATTERN="(^($ROOTDIRS))"
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# Add a user-defined pattern to the cygpath arguments
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if [ "$GRADLE_CYGPATTERN" != "" ] ; then
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OURCYGPATTERN="$OURCYGPATTERN|($GRADLE_CYGPATTERN)"
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fi
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# Now convert the arguments - kludge to limit ourselves to /bin/sh
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i=0
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for arg in "$@" ; do
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CHECK=`echo "$arg"|egrep -c "$OURCYGPATTERN" -`
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CHECK2=`echo "$arg"|egrep -c "^-"` ### Determine if an option
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if [ $CHECK -ne 0 ] && [ $CHECK2 -eq 0 ] ; then ### Added a condition
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eval `echo args$i`=`cygpath --path --ignore --mixed "$arg"`
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else
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eval `echo args$i`="\"$arg\""
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fi
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i=$((i+1))
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done
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case $i in
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(0) set -- ;;
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(1) set -- "$args0" ;;
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(2) set -- "$args0" "$args1" ;;
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(3) set -- "$args0" "$args1" "$args2" ;;
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(4) set -- "$args0" "$args1" "$args2" "$args3" ;;
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(5) set -- "$args0" "$args1" "$args2" "$args3" "$args4" ;;
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(6) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" ;;
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(7) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" ;;
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(8) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" ;;
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(9) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" "$args8" ;;
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esac
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fi
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# Escape application args
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save () {
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for i do printf %s\\n "$i" | sed "s/'/'\\\\''/g;1s/^/'/;\$s/\$/' \\\\/" ; done
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echo " "
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}
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APP_ARGS=$(save "$@")
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# Collect all arguments for the java command, following the shell quoting and substitution rules
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eval set -- $DEFAULT_JVM_OPTS $JAVA_OPTS $GRADLE_OPTS "\"-Dorg.gradle.appname=$APP_BASE_NAME\"" -classpath "\"$CLASSPATH\"" org.gradle.wrapper.GradleWrapperMain "$APP_ARGS"
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# by default we should be in the correct project dir, but when run from Finder on Mac, the cwd is wrong
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if [ "$(uname)" = "Darwin" ] && [ "$HOME" = "$PWD" ]; then
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cd "$(dirname "$0")"
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fi
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exec "$JAVACMD" "$@"
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data/gradlew.bat
ADDED
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@if "%DEBUG%" == "" @echo off
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@rem ##########################################################################
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@rem
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@rem Gradle startup script for Windows
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@rem
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@rem ##########################################################################
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@rem Set local scope for the variables with windows NT shell
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if "%OS%"=="Windows_NT" setlocal
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set DIRNAME=%~dp0
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if "%DIRNAME%" == "" set DIRNAME=.
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set APP_BASE_NAME=%~n0
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set APP_HOME=%DIRNAME%
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@rem Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
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set DEFAULT_JVM_OPTS=
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@rem Find java.exe
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if defined JAVA_HOME goto findJavaFromJavaHome
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set JAVA_EXE=java.exe
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%JAVA_EXE% -version >NUL 2>&1
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if "%ERRORLEVEL%" == "0" goto init
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echo.
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echo ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
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echo.
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echo Please set the JAVA_HOME variable in your environment to match the
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echo location of your Java installation.
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goto fail
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:findJavaFromJavaHome
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set JAVA_HOME=%JAVA_HOME:"=%
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set JAVA_EXE=%JAVA_HOME%/bin/java.exe
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if exist "%JAVA_EXE%" goto init
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echo.
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echo ERROR: JAVA_HOME is set to an invalid directory: %JAVA_HOME%
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echo.
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echo Please set the JAVA_HOME variable in your environment to match the
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echo location of your Java installation.
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goto fail
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:init
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@rem Get command-line arguments, handling Windows variants
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if not "%OS%" == "Windows_NT" goto win9xME_args
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:win9xME_args
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@rem Slurp the command line arguments.
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set CMD_LINE_ARGS=
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set _SKIP=2
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:win9xME_args_slurp
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if "x%~1" == "x" goto execute
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set CMD_LINE_ARGS=%*
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:execute
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@rem Setup the command line
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set CLASSPATH=%APP_HOME%\gradle\wrapper\gradle-wrapper.jar
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@rem Execute Gradle
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"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %CMD_LINE_ARGS%
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:end
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@rem End local scope for the variables with windows NT shell
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if "%ERRORLEVEL%"=="0" goto mainEnd
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:fail
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rem Set variable GRADLE_EXIT_CONSOLE if you need the _script_ return code instead of
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rem the _cmd.exe /c_ return code!
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if not "" == "%GRADLE_EXIT_CONSOLE%" exit 1
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exit /b 1
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:mainEnd
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if "%OS%"=="Windows_NT" endlocal
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:omega
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package org.embulk.input.bigquery_export_gcs;
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import java.io.File;
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import java.io.IOException;
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import java.io.InputStream;
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import java.nio.file.Path;
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import java.util.List;
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import org.codehaus.plexus.util.StringUtils;
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import org.embulk.config.Config;
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import org.embulk.config.ConfigDefault;
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import org.embulk.config.ConfigDiff;
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import org.embulk.config.ConfigInject;
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import org.embulk.config.ConfigSource;
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import org.embulk.config.Task;
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import org.embulk.config.TaskReport;
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import org.embulk.config.TaskSource;
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import org.embulk.exec.ConfigurableGuessInputPlugin;
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import org.embulk.exec.GuessExecutor;
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import org.embulk.spi.BufferAllocator;
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import org.embulk.spi.Exec;
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import org.embulk.spi.FileInputPlugin;
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import org.embulk.spi.Schema;
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import org.embulk.spi.TransactionalFileInput;
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import org.embulk.spi.util.InputStreamTransactionalFileInput;
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import org.slf4j.Logger;
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import com.google.api.services.bigquery.Bigquery;
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import com.google.common.base.Optional;
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import io.airlift.slice.RuntimeIOException;
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/**
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*
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*
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*
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* #reference :
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*
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* # https://github.com/embulk/embulk
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* # https://github.com/embulk/embulk-input-s3
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* # https://github.com/embulk/embulk-input-gcs
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* # https://github.com/embulk/embulk-input-jdbc
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* # https://github.com/GoogleCloudPlatform/java-docs-samples/blob/master/storage/json-api/src/main/java/StorageSample.java
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*
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*
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* @author george 2017. 11. 16.
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*
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*/
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public class BigqueryExportGcsFileInputPlugin
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implements FileInputPlugin, ConfigurableGuessInputPlugin
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{
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private static final Logger log = Exec.getLogger(BigqueryExportGcsFileInputPlugin.class);
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public interface PluginTask
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extends Task
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{
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@Config("project")
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public String getProject();
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@Config("json_keyfile")
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public String getJsonKeyfile();
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@Config("dataset")
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@ConfigDefault("null")
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public Optional<String> getDataset();
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@Config("table")
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@ConfigDefault("null")
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public Optional<String> getTable();
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@Config("query")
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@ConfigDefault("null")
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public Optional<String> getQuery();
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@Config("file_format")
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@ConfigDefault("\"CSV\"")
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public Optional<String> getFileFormat();
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@Config("compression")
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@ConfigDefault("\"GZIP\"")
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public Optional<String> getCompression();
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@Config("gcs_uri")
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public String getGcsUri();
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@Config("temp_dataset")
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@ConfigDefault("null")
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public Optional<String> getTempDataset();
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|
+
public void setTempDataset(Optional<String> tempDataset);
|
90
|
+
|
91
|
+
@Config("temp_table")
|
92
|
+
@ConfigDefault("null")
|
93
|
+
public Optional<String> getTempTable();
|
94
|
+
public void setTempTable(Optional<String> tempTable);
|
95
|
+
|
96
|
+
@Config("cache")
|
97
|
+
@ConfigDefault("true")
|
98
|
+
public boolean getQueryCache();
|
99
|
+
|
100
|
+
@Config("use_legacy_sql")
|
101
|
+
@ConfigDefault("false")
|
102
|
+
public boolean getUseLegacySql();
|
103
|
+
|
104
|
+
@Config("create_disposition")
|
105
|
+
@ConfigDefault("\"CREATE_IF_NEEDED\"")
|
106
|
+
public String getCreateDisposition();
|
107
|
+
|
108
|
+
@Config("write_disposition")
|
109
|
+
@ConfigDefault("\"WRITE_APPEND\"")
|
110
|
+
public String getWriteDisposition();
|
111
|
+
|
112
|
+
@Config("temp_local_path")
|
113
|
+
public String getTempLocalPath();
|
114
|
+
|
115
|
+
@Config("temp_schema_file_path")
|
116
|
+
@ConfigDefault("null")
|
117
|
+
public Optional<String> getTempSchemaFilePath();
|
118
|
+
|
119
|
+
@Config("temp_schema_file_tpye")
|
120
|
+
@ConfigDefault("null")
|
121
|
+
public Optional<String> getTempSchemaFileType();
|
122
|
+
|
123
|
+
|
124
|
+
@Config("cleanup_gcs_files")
|
125
|
+
@ConfigDefault("false")
|
126
|
+
public boolean getCleanupGcsTempFile();
|
127
|
+
|
128
|
+
@Config("cleanup_temp_table")
|
129
|
+
@ConfigDefault("true")
|
130
|
+
public boolean getCleanupTempTable();
|
131
|
+
|
132
|
+
public List<String> getFiles();
|
133
|
+
public void setFiles(List<String> files);
|
134
|
+
|
135
|
+
@ConfigInject
|
136
|
+
public BufferAllocator getBufferAllocator();
|
137
|
+
|
138
|
+
public String getGcsBucket();
|
139
|
+
public void setGcsBucket(String bucket);
|
140
|
+
|
141
|
+
public String getGcsBlobNamePrefix();
|
142
|
+
public void setGcsBlobNamePrefix(String blobName);
|
143
|
+
|
144
|
+
public String getWorkDataset();
|
145
|
+
public void setWorkDataset(String dataset);
|
146
|
+
|
147
|
+
public String getWorkTable();
|
148
|
+
public void setWorkTable(String table);
|
149
|
+
|
150
|
+
public String getWorkId();
|
151
|
+
public void setWorkId(String temp);
|
152
|
+
|
153
|
+
//public Schema getSchemaConfig();
|
154
|
+
//public void setSchameConfig(SchemaConfig schema);
|
155
|
+
}
|
156
|
+
|
157
|
+
@Override
|
158
|
+
public ConfigDiff guess(ConfigSource execConfig, ConfigSource inputConfig) {
|
159
|
+
|
160
|
+
GuessExecutor guessExecutor = Exec.getInjector().getInstance(GuessExecutor.class);
|
161
|
+
return guessExecutor.guessParserConfig(null, inputConfig, execConfig);
|
162
|
+
}
|
163
|
+
|
164
|
+
@Override
|
165
|
+
public ConfigDiff transaction(ConfigSource config, FileInputPlugin.Control control)
|
166
|
+
{
|
167
|
+
PluginTask task = config.loadConfig(PluginTask.class);
|
168
|
+
|
169
|
+
checkLocalPath(task);
|
170
|
+
|
171
|
+
executeBigqueryApi(task);
|
172
|
+
|
173
|
+
int taskCount = task.getFiles().size();
|
174
|
+
|
175
|
+
return resume(task.dump(), taskCount, control);
|
176
|
+
}
|
177
|
+
|
178
|
+
public void checkLocalPath(PluginTask task){
|
179
|
+
File localPath = new File(task.getTempLocalPath());
|
180
|
+
if(localPath.exists() == false){
|
181
|
+
log.error("local download path not exists : {}",localPath);
|
182
|
+
log.info("create local downlaod path : {}", localPath);
|
183
|
+
boolean ok = localPath.mkdirs();
|
184
|
+
if(!ok){
|
185
|
+
throw new RuntimeIOException(new IOException("local path create fail : " + localPath));
|
186
|
+
}
|
187
|
+
}
|
188
|
+
}
|
189
|
+
|
190
|
+
public void executeBigqueryApi(PluginTask task) {
|
191
|
+
|
192
|
+
BigqueryExportUtils.parseGcsUri(task);
|
193
|
+
|
194
|
+
Schema schema = extractBigqueryToGcs(task);
|
195
|
+
|
196
|
+
log.info("Schema : {}",schema.toString());
|
197
|
+
|
198
|
+
writeSchemaFileIfSpecified(schema, task);
|
199
|
+
|
200
|
+
List<String> files = listFilesOfGcs(task);
|
201
|
+
|
202
|
+
task.setFiles(files);
|
203
|
+
|
204
|
+
}
|
205
|
+
|
206
|
+
public void writeSchemaFileIfSpecified(Schema schema, PluginTask task) {
|
207
|
+
if(task.getTempSchemaFilePath().isPresent()) {
|
208
|
+
log.info("generate temp {} schema file to ... {}", task.getTempSchemaFileType().or(""), task.getTempSchemaFilePath().orNull());
|
209
|
+
BigqueryExportUtils.writeSchemaFile(schema, task.getTempSchemaFileType().orNull(), new File(task.getTempSchemaFilePath().get()));
|
210
|
+
}
|
211
|
+
}
|
212
|
+
|
213
|
+
public Schema extractBigqueryToGcs(PluginTask task){
|
214
|
+
try {
|
215
|
+
Bigquery bigquery = BigqueryExportUtils.newBigqueryClient(task);
|
216
|
+
|
217
|
+
// query init or execute query
|
218
|
+
BigqueryExportUtils.initWorkTableWithExecuteQuery(bigquery,task);
|
219
|
+
|
220
|
+
// extract table and get schema
|
221
|
+
Schema schema = BigqueryExportUtils.extractWorkTable(bigquery, task);
|
222
|
+
|
223
|
+
return schema;
|
224
|
+
} catch (IOException e) {
|
225
|
+
log.error("bigquery io error",e);
|
226
|
+
throw new RuntimeIOException(e);
|
227
|
+
} catch (InterruptedException e) {
|
228
|
+
log.error("bigquery job error",e);
|
229
|
+
throw new RuntimeException(e);
|
230
|
+
}
|
231
|
+
}
|
232
|
+
// usually, you have an method to create list of files
|
233
|
+
List<String> listFilesOfGcs(PluginTask task)
|
234
|
+
{
|
235
|
+
log.info("get file list in to gcs of ... {}.{} -> gs://{}/{}", task.getDataset(), task.getWorkTable(),task.getGcsBucket(),task.getGcsBlobNamePrefix());
|
236
|
+
|
237
|
+
try {
|
238
|
+
return BigqueryExportUtils.getFileListFromGcs(task);
|
239
|
+
} catch (IOException e) {
|
240
|
+
log.error("GCS api call error");
|
241
|
+
throw new RuntimeIOException(e);
|
242
|
+
}
|
243
|
+
|
244
|
+
}
|
245
|
+
|
246
|
+
|
247
|
+
@Override
|
248
|
+
public ConfigDiff resume(TaskSource taskSource,
|
249
|
+
int taskCount,
|
250
|
+
FileInputPlugin.Control control)
|
251
|
+
{
|
252
|
+
control.run(taskSource, taskCount);
|
253
|
+
|
254
|
+
ConfigDiff configDiff = Exec.newConfigDiff();
|
255
|
+
//configDiff.has(attrName)
|
256
|
+
|
257
|
+
|
258
|
+
// usually, yo uset last_path
|
259
|
+
//if (task.getFiles().isEmpty()) {
|
260
|
+
// if (task.getLastPath().isPresent()) {
|
261
|
+
// configDiff.set("last_path", task.getLastPath().get());
|
262
|
+
// }
|
263
|
+
//} else {
|
264
|
+
// List<String> files = new ArrayList<String>(task.getFiles());
|
265
|
+
// Collections.sort(files);
|
266
|
+
// configDiff.set("last_path", files.get(files.size() - 1));
|
267
|
+
//}
|
268
|
+
|
269
|
+
return configDiff;
|
270
|
+
}
|
271
|
+
|
272
|
+
@Override
|
273
|
+
public void cleanup(TaskSource taskSource,
|
274
|
+
int taskCount,
|
275
|
+
List<TaskReport> successTaskReports)
|
276
|
+
{
|
277
|
+
final PluginTask task = taskSource.loadTask(PluginTask.class);
|
278
|
+
|
279
|
+
// remove query temp table when exists
|
280
|
+
if(task.getCleanupTempTable() &&
|
281
|
+
task.getTempTable().isPresent() &&
|
282
|
+
task.getQuery().isPresent() &&
|
283
|
+
task.getTempDataset().isPresent()){
|
284
|
+
BigqueryExportUtils.removeTempTable(task);
|
285
|
+
}
|
286
|
+
|
287
|
+
for(int i=0; i < successTaskReports.size(); i++){
|
288
|
+
TaskReport report = successTaskReports.get(i);
|
289
|
+
if( report.isEmpty() ){
|
290
|
+
String file = task.getFiles().get(i);
|
291
|
+
|
292
|
+
Path p = BigqueryExportUtils.getFullPath(task,file);
|
293
|
+
|
294
|
+
log.info("delete temp file...{}",p);
|
295
|
+
p.toFile().delete();
|
296
|
+
|
297
|
+
if(task.getCleanupGcsTempFile()){
|
298
|
+
//TODO : delete temp file in gcs
|
299
|
+
log.info("delete temp gcs file... {} ... not now... ", file);
|
300
|
+
}
|
301
|
+
|
302
|
+
//
|
303
|
+
}else{
|
304
|
+
log.error("datasource not empty : {}", report);
|
305
|
+
}
|
306
|
+
}
|
307
|
+
|
308
|
+
}
|
309
|
+
|
310
|
+
|
311
|
+
@Override
|
312
|
+
public TransactionalFileInput open(TaskSource taskSource, int taskIndex)
|
313
|
+
{
|
314
|
+
final PluginTask task = taskSource.loadTask(PluginTask.class);
|
315
|
+
|
316
|
+
// Write your code here :)
|
317
|
+
//throw new UnsupportedOperationException("BigquerycsvFileInputPlugin.open method is not implemented yet");
|
318
|
+
|
319
|
+
// if you expect InputStream, you can use this code:
|
320
|
+
|
321
|
+
InputStream input = BigqueryExportUtils.openInputStream(task, task.getFiles().get(taskIndex));
|
322
|
+
|
323
|
+
return new InputStreamTransactionalFileInput(task.getBufferAllocator(), input) {
|
324
|
+
@Override
|
325
|
+
public void abort()
|
326
|
+
{ }
|
327
|
+
|
328
|
+
@Override
|
329
|
+
public TaskReport commit()
|
330
|
+
{
|
331
|
+
return Exec.newTaskReport();
|
332
|
+
}
|
333
|
+
};
|
334
|
+
}
|
335
|
+
|
336
|
+
//////////////////////////////////////////////////////////////////////////////////////////////////////////////////
|
337
|
+
////////////////////////////////////////////////////////////////////////////////////////////////////////////////
|
338
|
+
////////////////////////////////////////////////////////////////////////////////////////////////////////////////
|
339
|
+
|
340
|
+
}
|