embulk-executor-mapreduce 0.1.0
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- checksums.yaml +7 -0
- data/build.gradle +2 -0
- data/classpath/activation-1.1.jar +0 -0
- data/classpath/apacheds-i18n-2.0.0-M15.jar +0 -0
- data/classpath/apacheds-kerberos-codec-2.0.0-M15.jar +0 -0
- data/classpath/api-asn1-api-1.0.0-M20.jar +0 -0
- data/classpath/api-util-1.0.0-M20.jar +0 -0
- data/classpath/avro-1.7.4.jar +0 -0
- data/classpath/commons-beanutils-1.7.0.jar +0 -0
- data/classpath/commons-cli-1.2.jar +0 -0
- data/classpath/commons-codec-1.6.jar +0 -0
- data/classpath/commons-collections-3.2.1.jar +0 -0
- data/classpath/commons-compress-1.4.1.jar +0 -0
- data/classpath/commons-configuration-1.6.jar +0 -0
- data/classpath/commons-digester-1.8.jar +0 -0
- data/classpath/commons-httpclient-3.1.jar +0 -0
- data/classpath/commons-io-2.4.jar +0 -0
- data/classpath/commons-lang-2.6.jar +0 -0
- data/classpath/commons-logging-1.1.3.jar +0 -0
- data/classpath/commons-math3-3.1.1.jar +0 -0
- data/classpath/commons-net-3.1.jar +0 -0
- data/classpath/curator-client-2.6.0.jar +0 -0
- data/classpath/curator-framework-2.6.0.jar +0 -0
- data/classpath/curator-recipes-2.6.0.jar +0 -0
- data/classpath/embulk-executor-mapreduce-0.1.0.jar +0 -0
- data/classpath/gson-2.2.4.jar +0 -0
- data/classpath/hadoop-annotations-2.6.0.jar +0 -0
- data/classpath/hadoop-auth-2.6.0.jar +0 -0
- data/classpath/hadoop-client-2.6.0.jar +0 -0
- data/classpath/hadoop-common-2.6.0.jar +0 -0
- data/classpath/hadoop-hdfs-2.6.0.jar +0 -0
- data/classpath/hadoop-mapreduce-client-app-2.6.0.jar +0 -0
- data/classpath/hadoop-mapreduce-client-common-2.6.0.jar +0 -0
- data/classpath/hadoop-mapreduce-client-core-2.6.0.jar +0 -0
- data/classpath/hadoop-mapreduce-client-jobclient-2.6.0.jar +0 -0
- data/classpath/hadoop-mapreduce-client-shuffle-2.6.0.jar +0 -0
- data/classpath/hadoop-yarn-api-2.6.0.jar +0 -0
- data/classpath/hadoop-yarn-client-2.6.0.jar +0 -0
- data/classpath/hadoop-yarn-common-2.6.0.jar +0 -0
- data/classpath/hadoop-yarn-server-common-2.6.0.jar +0 -0
- data/classpath/hadoop-yarn-server-nodemanager-2.6.0.jar +0 -0
- data/classpath/htrace-core-3.0.4.jar +0 -0
- data/classpath/httpclient-4.2.5.jar +0 -0
- data/classpath/httpcore-4.2.4.jar +0 -0
- data/classpath/jackson-core-asl-1.9.13.jar +0 -0
- data/classpath/jackson-jaxrs-1.9.13.jar +0 -0
- data/classpath/jackson-mapper-asl-1.9.13.jar +0 -0
- data/classpath/jackson-xc-1.9.13.jar +0 -0
- data/classpath/jaxb-api-2.2.2.jar +0 -0
- data/classpath/jaxb-impl-2.2.3-1.jar +0 -0
- data/classpath/jersey-client-1.9.jar +0 -0
- data/classpath/jersey-core-1.9.jar +0 -0
- data/classpath/jersey-guice-1.9.jar +0 -0
- data/classpath/jersey-json-1.9.jar +0 -0
- data/classpath/jersey-server-1.9.jar +0 -0
- data/classpath/jettison-1.1.jar +0 -0
- data/classpath/jetty-util-6.1.26.jar +0 -0
- data/classpath/jline-0.9.94.jar +0 -0
- data/classpath/jsr305-1.3.9.jar +0 -0
- data/classpath/leveldbjni-all-1.8.jar +0 -0
- data/classpath/netty-3.7.0.Final.jar +0 -0
- data/classpath/paranamer-2.3.jar +0 -0
- data/classpath/protobuf-java-2.5.0.jar +0 -0
- data/classpath/servlet-api-2.5.jar +0 -0
- data/classpath/snappy-java-1.0.4.1.jar +0 -0
- data/classpath/stax-api-1.0-2.jar +0 -0
- data/classpath/xmlenc-0.52.jar +0 -0
- data/classpath/xz-1.0.jar +0 -0
- data/classpath/zookeeper-3.4.6.jar +0 -0
- data/lib/embulk/executor/mapreduce.rb +3 -0
- data/src/main/java/org/embulk/executor/mapreduce/AttemptState.java +154 -0
- data/src/main/java/org/embulk/executor/mapreduce/BufferWritable.java +74 -0
- data/src/main/java/org/embulk/executor/mapreduce/BufferedPagePartitioner.java +158 -0
- data/src/main/java/org/embulk/executor/mapreduce/EmbulkInputFormat.java +37 -0
- data/src/main/java/org/embulk/executor/mapreduce/EmbulkInputSplit.java +61 -0
- data/src/main/java/org/embulk/executor/mapreduce/EmbulkMapReduce.java +359 -0
- data/src/main/java/org/embulk/executor/mapreduce/EmbulkPartitioningMapReduce.java +303 -0
- data/src/main/java/org/embulk/executor/mapreduce/EmbulkRecordReader.java +63 -0
- data/src/main/java/org/embulk/executor/mapreduce/MapReduceExecutor.java +391 -0
- data/src/main/java/org/embulk/executor/mapreduce/MapReduceExecutorTask.java +60 -0
- data/src/main/java/org/embulk/executor/mapreduce/PageWritable.java +66 -0
- data/src/main/java/org/embulk/executor/mapreduce/PartitionKey.java +11 -0
- data/src/main/java/org/embulk/executor/mapreduce/Partitioner.java +11 -0
- data/src/main/java/org/embulk/executor/mapreduce/Partitioning.java +12 -0
- data/src/main/java/org/embulk/executor/mapreduce/PluginArchive.java +189 -0
- data/src/main/java/org/embulk/executor/mapreduce/RemoteTaskFailedException.java +10 -0
- data/src/main/java/org/embulk/executor/mapreduce/SetContextClassLoader.java +19 -0
- data/src/main/java/org/embulk/executor/mapreduce/TimestampPartitioning.java +291 -0
- metadata +131 -0
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package org.embulk.executor.mapreduce;
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import java.io.DataInput;
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import java.io.DataOutput;
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import java.io.IOException;
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import org.apache.hadoop.io.Writable;
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import org.apache.hadoop.mapreduce.InputSplit;
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public class EmbulkInputSplit
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extends InputSplit
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implements Writable
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{
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private int[] taskIndexes;
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public EmbulkInputSplit()
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{
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this(new int[0]);
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}
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public EmbulkInputSplit(int[] taskIndexes)
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{
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this.taskIndexes = taskIndexes;
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}
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public int[] getTaskIndexes()
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{
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return taskIndexes;
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}
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@Override
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public long getLength()
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{
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return taskIndexes.length;
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}
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@Override
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public String[] getLocations()
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return new String[0];
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}
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@Override
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public void write(DataOutput out) throws IOException
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{
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out.writeInt(taskIndexes.length);
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for (int taskIndex : taskIndexes) {
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out.writeInt(taskIndex);
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}
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}
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@Override
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public void readFields(DataInput in) throws IOException
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{
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int c = in.readInt();
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int[] taskIndexes = new int[c];
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for (int i=0; i < c; i++) {
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taskIndexes[i] = in.readInt();
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}
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this.taskIndexes = taskIndexes;
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}
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}
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package org.embulk.executor.mapreduce;
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import java.util.List;
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import java.util.ArrayList;
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import java.util.concurrent.ExecutionException;
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import java.io.File;
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import java.io.IOException;
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import com.google.inject.Injector;
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import com.google.common.base.Optional;
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import com.google.common.base.Throwables;
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import com.google.common.collect.ImmutableList;
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import com.fasterxml.jackson.core.JsonFactory;
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import com.fasterxml.jackson.databind.ObjectMapper;
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import org.jruby.embed.ScriptingContainer;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.fs.FileStatus;
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import org.apache.hadoop.fs.FSDataInputStream;
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import org.apache.hadoop.fs.FSDataOutputStream;
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import org.apache.hadoop.fs.LocalDirAllocator;
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import org.apache.hadoop.io.IntWritable;
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import org.apache.hadoop.io.NullWritable;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.mapreduce.Job;
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import org.apache.hadoop.mapreduce.JobContext;
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import org.apache.hadoop.mapreduce.TaskAttemptID;
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import org.apache.hadoop.mapreduce.Mapper;
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import org.apache.hadoop.mapreduce.Reducer;
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import org.apache.hadoop.mapreduce.TaskAttemptContext;
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import org.apache.hadoop.mapreduce.MRConfig;
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import org.embulk.config.ModelManager;
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import org.embulk.config.ConfigSource;
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import org.embulk.config.ConfigLoader;
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import org.embulk.config.CommitReport;
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import org.embulk.spi.BufferAllocator;
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import org.embulk.spi.Exec;
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import org.embulk.spi.ExecAction;
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import org.embulk.spi.ExecSession;
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import org.embulk.spi.ProcessTask;
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import org.embulk.spi.util.Executors;
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import org.embulk.EmbulkService;
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public class EmbulkMapReduce
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{
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private static final String CK_SYSTEM_CONFIG = "embulk.mapreduce.systemConfig";
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private static final String CK_STATE_DIRECTORY_PATH = "embulk.mapreduce.stateDirectorypath";
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private static final String CK_TASK_COUNT = "embulk.mapreduce.taskCount";
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private static final String CK_TASK = "embulk.mapreduce.task";
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private static final String CK_PLUGIN_ARCHIVE_SPECS = "embulk.mapreduce.pluginArchive.specs";
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private static final String PLUGIN_ARCHIVE_FILE_NAME = "gems.zip";
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public static void setSystemConfig(Configuration config, ModelManager modelManager, ConfigSource systemConfig)
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{
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config.set(CK_SYSTEM_CONFIG, modelManager.writeObject(systemConfig));
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}
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public static ConfigSource getSystemConfig(Configuration config)
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{
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try {
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ModelManager bootstrapModelManager = new ModelManager(null, new ObjectMapper());
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return new ConfigLoader(bootstrapModelManager).fromJson(
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new JsonFactory().createParser(config.get(CK_SYSTEM_CONFIG))); // TODO add fromJson(String)
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} catch (IOException e) {
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throw Throwables.propagate(e);
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}
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}
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public static void setMapTaskCount(Configuration config, int taskCount)
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{
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config.setInt(CK_TASK_COUNT, taskCount);
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}
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public static int getMapTaskCount(Configuration config)
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{
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return config.getInt(CK_TASK_COUNT, 0);
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}
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public static void setStateDirectoryPath(Configuration config, Path path)
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{
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config.set(CK_STATE_DIRECTORY_PATH, path.toString());
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}
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public static Path getStateDirectoryPath(Configuration config)
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{
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return new Path(config.get(CK_STATE_DIRECTORY_PATH));
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}
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public static void setExecutorTask(Configuration config, ModelManager modelManager, MapReduceExecutorTask task)
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{
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config.set(CK_TASK, modelManager.writeObject(task));
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}
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public static MapReduceExecutorTask getExecutorTask(Injector injector, Configuration config)
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{
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return injector.getInstance(ModelManager.class).readObject(MapReduceExecutorTask.class,
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config.get(CK_TASK));
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}
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public static Injector newEmbulkInstance(Configuration config)
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{
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ConfigSource systemConfig = getSystemConfig(config);
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return new EmbulkService(systemConfig).getInjector();
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}
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public static List<TaskAttemptID> listAttempts(Configuration config,
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Path stateDir) throws IOException
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{
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FileStatus[] stats = stateDir.getFileSystem(config).listStatus(stateDir);
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ImmutableList.Builder<TaskAttemptID> builder = ImmutableList.builder();
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for (FileStatus stat : stats) {
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if (stat.getPath().getName().startsWith("attempt_") && stat.isFile()) {
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String name = stat.getPath().getName();
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try {
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builder.add(TaskAttemptID.forName(name));
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} catch (IllegalArgumentException ex) {
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// ignore
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}
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}
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}
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return builder.build();
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}
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public static PluginArchive readPluginArchive(File localDirectory, Configuration config,
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Path stateDir, ModelManager modelManager) throws IOException
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{
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List<PluginArchive.GemSpec> specs = modelManager.readObject(
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new ArrayList<PluginArchive.GemSpec>() {}.getClass(),
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config.get(CK_PLUGIN_ARCHIVE_SPECS));
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Path path = new Path(stateDir, PLUGIN_ARCHIVE_FILE_NAME);
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try (FSDataInputStream in = path.getFileSystem(config).open(path)) {
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return PluginArchive.load(localDirectory, specs, in);
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}
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}
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public static void writePluginArchive(Configuration config, Path stateDir,
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PluginArchive archive, ModelManager modelManager) throws IOException
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{
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Path path = new Path(stateDir, PLUGIN_ARCHIVE_FILE_NAME);
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try (FSDataOutputStream out = path.getFileSystem(config).create(path, true)) {
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List<PluginArchive.GemSpec> specs = archive.dump(out);
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config.set(CK_PLUGIN_ARCHIVE_SPECS, modelManager.writeObject(specs));
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}
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}
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public static AttemptState readAttemptStateFile(Configuration config,
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Path stateDir, TaskAttemptID id, ModelManager modelManager) throws IOException
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{
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Path path = new Path(stateDir, id.toString());
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try (FSDataInputStream in = path.getFileSystem(config).open(path)) {
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return AttemptState.readFrom(in, modelManager);
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}
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}
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public static void writeAttemptStateFile(Configuration config,
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Path stateDir, AttemptState state, ModelManager modelManager) throws IOException
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{
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Path path = new Path(stateDir, state.getAttemptId().toString());
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try (FSDataOutputStream out = path.getFileSystem(config).create(path, true)) {
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state.writeTo(out, modelManager);
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}
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}
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public static class SessionRunner
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{
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private final Configuration config;
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private final Injector injector;
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private final ModelManager modelManager;
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private final MapReduceExecutorTask task;
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private final ExecSession session;
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private final File localGemPath;
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public SessionRunner(TaskAttemptContext context)
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{
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this.config = context.getConfiguration();
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this.injector = newEmbulkInstance(context.getConfiguration());
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this.modelManager = injector.getInstance(ModelManager.class);
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this.task = getExecutorTask(injector, context.getConfiguration());
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this.session = new ExecSession(injector, task.getExecConfig());
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try {
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LocalDirAllocator localDirAllocator = new LocalDirAllocator(MRConfig.LOCAL_DIR);
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Path destPath = localDirAllocator.getLocalPathForWrite("gems", config);
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this.localGemPath = new File(destPath.toString());
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} catch (IOException ex) {
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throw new RuntimeException(ex);
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}
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}
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public PluginArchive readPluginArchive() throws IOException
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{
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localGemPath.mkdirs();
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return EmbulkMapReduce.readPluginArchive(localGemPath, config, getStateDirectoryPath(config), modelManager);
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}
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public Configuration getConfiguration()
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{
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return config;
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}
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public ModelManager getModelManager()
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{
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return modelManager;
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}
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public BufferAllocator getBufferAllocator()
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{
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return injector.getInstance(BufferAllocator.class);
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}
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public ScriptingContainer getScriptingContainer()
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{
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return injector.getInstance(ScriptingContainer.class);
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212
|
+
}
|
213
|
+
|
214
|
+
public MapReduceExecutorTask getMapReduceExecutorTask()
|
215
|
+
{
|
216
|
+
return task;
|
217
|
+
}
|
218
|
+
|
219
|
+
public ExecSession getExecSession()
|
220
|
+
{
|
221
|
+
return session;
|
222
|
+
}
|
223
|
+
|
224
|
+
public <T> T execSession(ExecAction<T> action) throws IOException, InterruptedException
|
225
|
+
{
|
226
|
+
try {
|
227
|
+
return Exec.doWith(session, action);
|
228
|
+
} catch (ExecutionException e) {
|
229
|
+
Throwables.propagateIfInstanceOf(e.getCause(), IOException.class);
|
230
|
+
Throwables.propagateIfInstanceOf(e.getCause(), InterruptedException.class);
|
231
|
+
throw Throwables.propagate(e.getCause());
|
232
|
+
}
|
233
|
+
}
|
234
|
+
|
235
|
+
public void deleteTempFiles()
|
236
|
+
{
|
237
|
+
// TODO delete localGemPath
|
238
|
+
}
|
239
|
+
}
|
240
|
+
|
241
|
+
public static class AttemptStateUpdateHandler
|
242
|
+
implements Executors.ProcessStateCallback
|
243
|
+
{
|
244
|
+
private final Configuration config;
|
245
|
+
private final Path stateDir;
|
246
|
+
private final ModelManager modelManager;
|
247
|
+
private final AttemptState state;
|
248
|
+
|
249
|
+
public AttemptStateUpdateHandler(SessionRunner runner, AttemptState state)
|
250
|
+
{
|
251
|
+
this.config = runner.getConfiguration();
|
252
|
+
this.stateDir = getStateDirectoryPath(config);
|
253
|
+
this.state = state;
|
254
|
+
this.modelManager = runner.getModelManager();
|
255
|
+
}
|
256
|
+
|
257
|
+
@Override
|
258
|
+
public void started()
|
259
|
+
{
|
260
|
+
try {
|
261
|
+
writeAttemptStateFile(config, stateDir, state, modelManager);
|
262
|
+
} catch (IOException e) {
|
263
|
+
throw new RuntimeException(e);
|
264
|
+
}
|
265
|
+
}
|
266
|
+
|
267
|
+
@Override
|
268
|
+
public void inputCommitted(CommitReport report)
|
269
|
+
{
|
270
|
+
state.setInputCommitReport(report);
|
271
|
+
try {
|
272
|
+
writeAttemptStateFile(config, stateDir, state, modelManager);
|
273
|
+
} catch (IOException e) {
|
274
|
+
throw new RuntimeException(e);
|
275
|
+
}
|
276
|
+
}
|
277
|
+
|
278
|
+
@Override
|
279
|
+
public void outputCommitted(CommitReport report)
|
280
|
+
{
|
281
|
+
state.setOutputCommitReport(report);
|
282
|
+
try {
|
283
|
+
writeAttemptStateFile(config, stateDir, state, modelManager);
|
284
|
+
} catch (IOException e) {
|
285
|
+
throw new RuntimeException(e);
|
286
|
+
}
|
287
|
+
}
|
288
|
+
|
289
|
+
public void setException(Throwable ex) throws IOException
|
290
|
+
{
|
291
|
+
state.setException(ex);
|
292
|
+
writeAttemptStateFile(config, stateDir, state, modelManager);
|
293
|
+
}
|
294
|
+
}
|
295
|
+
|
296
|
+
public static class EmbulkMapper
|
297
|
+
extends Mapper<IntWritable, NullWritable, NullWritable, NullWritable>
|
298
|
+
{
|
299
|
+
private Context context;
|
300
|
+
private SessionRunner runner;
|
301
|
+
|
302
|
+
@Override
|
303
|
+
public void setup(Context context) throws IOException
|
304
|
+
{
|
305
|
+
this.context = context;
|
306
|
+
this.runner = new SessionRunner(context);
|
307
|
+
runner.readPluginArchive().restoreLoadPathsTo(runner.getScriptingContainer());
|
308
|
+
}
|
309
|
+
|
310
|
+
@Override
|
311
|
+
public void map(IntWritable key, NullWritable value, final Context context) throws IOException, InterruptedException
|
312
|
+
{
|
313
|
+
final int taskIndex = key.get();
|
314
|
+
|
315
|
+
runner.execSession(new ExecAction<Void>() {
|
316
|
+
public Void run() throws Exception
|
317
|
+
{
|
318
|
+
process(context, taskIndex);
|
319
|
+
return null;
|
320
|
+
}
|
321
|
+
});
|
322
|
+
}
|
323
|
+
|
324
|
+
private void process(final Context context, int taskIndex) throws IOException, InterruptedException
|
325
|
+
{
|
326
|
+
ProcessTask task = runner.getMapReduceExecutorTask().getProcessTask();
|
327
|
+
|
328
|
+
AttemptStateUpdateHandler handler = new AttemptStateUpdateHandler(runner,
|
329
|
+
new AttemptState(context.getTaskAttemptID(), Optional.of(taskIndex), Optional.of(taskIndex)));
|
330
|
+
|
331
|
+
try {
|
332
|
+
Executors.process(runner.getExecSession(), task, taskIndex, handler);
|
333
|
+
} catch (Throwable ex) {
|
334
|
+
try {
|
335
|
+
handler.setException(ex);
|
336
|
+
} catch (Throwable e) {
|
337
|
+
e.addSuppressed(ex);
|
338
|
+
throw e;
|
339
|
+
}
|
340
|
+
//if (task.getTaskRecovery()) {
|
341
|
+
// throw ex;
|
342
|
+
//}
|
343
|
+
}
|
344
|
+
}
|
345
|
+
}
|
346
|
+
|
347
|
+
public static class EmbulkReducer
|
348
|
+
extends Reducer<NullWritable, NullWritable, NullWritable, NullWritable>
|
349
|
+
{
|
350
|
+
private IntWritable result = new IntWritable();
|
351
|
+
|
352
|
+
@Override
|
353
|
+
public void reduce(NullWritable key, Iterable<NullWritable> values, Context context)
|
354
|
+
throws IOException, InterruptedException
|
355
|
+
{
|
356
|
+
// do nothing
|
357
|
+
}
|
358
|
+
}
|
359
|
+
}
|