elixir-toolkit-theme 2.4.0 → 3.0.0
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- checksums.yaml +4 -4
- data/README.md +7 -5
- data/_includes/contributor-minitiles-page.html +1 -1
- data/_includes/head.html +6 -5
- data/_includes/more-information-tiles.html +142 -114
- data/_includes/related-pages.html +23 -17
- data/_includes/resource-table-all.html +77 -31
- data/_includes/section-navigation-tiles-simple.html +2 -2
- data/_includes/section-navigation-tiles.html +22 -78
- data/_sass/_variables.scss +6 -8
- data/assets/css/main.scss +95 -48
- data/assets/img/dsw_logo.svg +50 -0
- data/assets/img/faircookbook_logo.svg +41 -0
- data/assets/img/fairsharing_logo.svg +205 -0
- data/assets/img/rdmkit_logo.svg +1 -0
- metadata +6 -6
- data/assets/img/dsw_compact_logo.svg +0 -10
- data/assets/img/fairplus_compact_logo.svg +0 -17
- data/assets/img/fairsharing_compact_logo.svg +0 -28
- data/assets/img/rdmkit_compact_logo.svg +0 -1
checksums.yaml
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@@ -1,7 +1,7 @@
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---
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SHA256:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 4df02358a1652000ceb9b7a533633a3a8e8d13adf360cf24ac16b8449656c065
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data.tar.gz: c40220fd4df7b25b67dae45c4929dd0a60307b9c201bbebefa02667c4a88d9fe
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: a80a7bfde86d9da466a492da92426c5d6ad0e80def5c62bfcfcad9e1e43654b1997e7a845ca42b0ffaec0e4d3f6b047a264b23f36f77a9b6ccb0ad1db919edf5
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data.tar.gz: c8006541b91f6921a7251376e07ee51c52ab731b4fe6672e986648dcc433bdf9cab1a2cc1667fb9a85a0867f4158c7d0b5879c3c663b00a568e7e49b820e27eb
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data/README.md
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@@ -37,7 +37,7 @@ remote_theme: ELIXIR-Belgium/elixir-toolkit-theme
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You can lock it onto a specific version like using:
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```yaml
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remote_theme: ELIXIR-Belgium/elixir-toolkit-theme@
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remote_theme: ELIXIR-Belgium/elixir-toolkit-theme@2.5.0
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```
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### Using Ruby Gems (alternative)
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You can lock it onto a specific version like this:
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```ruby
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gem "elixir-toolkit-theme", "~>
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gem "elixir-toolkit-theme", "~> 2.5.0"
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```
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And add this line to your Jekyll site's `_config.yml`:
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### Via GitHub Actions
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1. Make sure you have a GitHub workflow file setup similar to the one in this repo at [.github/workflows/jekyll.yml](https://github.com/ELIXIR-Belgium/elixir-toolkit-theme/blob/main/.github/workflows/jekyll.yml).
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2. Go to Settings > Actions and enable Allow all actions and reusable workflows
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3. Got to the Actions tab of the repository and trust the workflows to run.
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4. Go to Settings > Pages and enable GitHub Actions as a source
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5. Go to Environments > github-pages and remove the rule under Deployment branches if you want to deploy other branches than master or main via Workflow Dispatch (manually triggered action)
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6. Trigger the workflow by pushing a change to main or manually trigger the actions within the Actions tab of the repository.
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### Via GitHub Pages
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{%- if page.contributors and page.contributors.size != 0 %}
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<span class="d-block h2-like fs-2">{{site.theme_variables.
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<span class="d-block h2-like fs-2">{{site.theme_variables.contributor-minitiles-page | default: 'Contributors' }}</span>
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<div class="p-4 rounded mt-4 page-contributors d-flex flex-wrap gap-2">
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{%- assign contributors = site.data.CONTRIBUTORS %}
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{%- assign page_contributors = page.contributors %}
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data/_includes/head.html
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_paq.push(['trackPageView']);
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_paq.push(['enableLinkTracking']);
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(function() {
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var u="{{site.matomo}}";
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_paq.push(['setTrackerUrl', u+'matomo.php']);
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_paq.push(['setSiteId', '{{site.matomo_id}}']);
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var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
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g.async=true; g.src=u+'matomo.js'; s.parentNode.insertBefore(g,s);
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})();
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</script>
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<!-- End Matomo Code -->
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{%- endif %}
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</head>
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{%- if page.
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{%- assign
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{%- for
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{%- if
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{%- assign
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{%- if page.fairsharing %}
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{%- assign actual_fairsharing = nil %}
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{%- for standard in page.fairsharing %}
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{%- if standard.name %}
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{%- assign actual_fairsharing = 1 %}
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{%- endif %}
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{%- endfor %}
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{%- endif %}
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{%- endif %}
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{%- endfor %}
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{%- endif %}
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{%- if page.fairsharing %}
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{%- assign actual_fairsharing = nil %}
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{%- for standard in page.fairsharing %}
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{%- if standard.name %}
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{%- assign actual_fairsharing = 1 %}
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{%- endif %}
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{%- endfor %}
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{%- endif %}
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{%- if page.dsw %}
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{%- assign actual_dsw = nil %}
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{%- for question in page.dsw %}
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{%- endif %}
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{%- endfor %}
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{%- endif %}
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{%- if
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{%- if page.training %}
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{%- assign actual_training = nil %}
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{%- for training in page.training %}
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{%- if training.name %}
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{%- assign actual_training = 1 %}
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{%- endif %}
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{%- endfor %}
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{%- endif %}
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{%- if page.page_id %}
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{%- assign tools = site.data.tool_and_resource_list | where:"related_pages", page.page_id %}
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{%- unless tools.size == 0 or tools == nil %}
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{%- if site.theme_variables.headings.resource-table-all-collapse %}
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{%- assign actual_tools = 1 %}
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{%- endif %}
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{%- endunless %}
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{%- endif %}
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{%- if actual_fairsharing or actual_faircookbook or actual_dsw or actual_rdmkit or actual_dsw or actual_training or actual_tools %}
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<h2 class="mb-4">{{site.theme_variables.headings.more-information-tiles | default: 'More information' }}</h2>
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{%- endif %}
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{%- elsif registry == "zenodo" %}
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<img alt="Zenodo logo" class="img-fluid" src="{{ 'assets/img/zenodo_logo.svg' | relative_url }}">
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{%- elsif registry == "youtube" %}
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<img alt="YouTube logo" class="img-fluid" src="{{ 'assets/img/youtube_logo.svg' | relative_url }}">
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{%- elsif registry == "carpentries" %}
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<img alt="Carpentries" class="img-fluid" src="{{ 'assets/img/carpentries_logo.svg' | relative_url }}">
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{%- elsif registry == "github" %}
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<i class="fa-brands fa-github text-dark fa-2xl my-3"></i>
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{%- else %}
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<i class="fa-solid fa-external-link-alt text-primary fa-lg my-3"></i>
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{%- endif %}
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</div>
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<div class="col-10 d-flex align-items-center">
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<span class="text-start">{{training.name}}</span>
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</div>
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</div>
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</a>
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{%- endfor %}
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</div>
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{%- if actual_fairsharing %}
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<!-- FAIRsharing -->
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<a data-bs-toggle="collapse" href="#fairsharing_collapse" role="button" aria-expanded="false" aria-controls="fairsharing_collapse" class="d-flex align-items-baseline pb-3 border-top info-collapse">
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<h3 class="mb-0 flex-grow-1 mt-3 text-dark">Links to FAIRsharing</h3><i class="fa-solid fa-chevron-down fs-5"></i>
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</a>
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<div class="collapse info-card" id="fairsharing_collapse">
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<div class="mt-2 p-3 pb-5">
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<img alt="FAIRsharing logo" class="img-fluid info-logo mb-4" src="{{ 'assets/img/fairsharing_logo.svg' | relative_url }}">
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<p><a href="https://fairsharing.org/">FAIRsharing</a> is a curated, informative and educational resource on data and metadata standards, inter-related to databases and data policies.</p>
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<div class="row row-cols-1 row-cols-md-2 gy-2 gx-4 info-links">
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{%- for standard in page.fairsharing %}
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<div class="col">
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<a class="btn text-start d-flex align-items-center h-100" href="{{ standard.url }}">
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{{standard.name}}
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</a>
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</div>
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{%- endfor %}
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</div>
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</div>
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</div>
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{%- endif %}
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{%- if actual_faircookbook %}
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<!-- FAIR Cookbook -->
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<a data-bs-toggle="collapse" href="#faircookbook_collapse" role="button" aria-expanded="false" aria-controls="faircookbook_collapse" class="d-flex align-items-baseline pb-3 border-top info-collapse">
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<h3 class="mb-0 flex-grow-1 mt-3 text-dark">Links to FAIR Cookbook</h3><i class="fa-solid fa-chevron-down fs-5"></i>
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</a>
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<div class="collapse info-card" id="faircookbook_collapse">
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<div class="mt-2 p-3 pb-5">
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<img alt="FAIR Cookbook logo" class="img-fluid info-logo mb-4" src="{{ 'assets/img/faircookbook_logo.svg' | relative_url }}">
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<p><a href="https://faircookbook.elixir-europe.org/">FAIR Cookbook</a> is an online, open and live resource for the Life Sciences with recipes that help you to make and keep data Findable, Accessible, Interoperable and Reusable; in one word FAIR.</p>
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<div class="row row-cols-1 row-cols-md-2 gy-2 gx-4 info-links">
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{%- for recipe in page.faircookbook %}
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<div class="col">
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<a class="btn text-start d-flex align-items-center h-100" href="{{ recipe.url }}">
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{{recipe.name}}
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</a>
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</div>
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{%- endfor %}
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</div>
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</div>
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</div>
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{%- endif %}
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{%- if actual_dsw %}
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<!-- DSW -->
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<a data-bs-toggle="collapse" href="#dsw_collapse" role="button" aria-expanded="false" aria-controls="dsw_collapse" class="d-flex align-items-baseline pb-3 border-top info-collapse">
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<h3 class="mb-0 flex-grow-1 mt-3 text-dark">Links to DSW</h3><i class="fa-solid fa-chevron-down fs-5"></i>
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</a>
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<div class="collapse info-card" id="dsw_collapse">
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<div class="mt-2 p-3 pb-5">
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<img alt="DSW logo" class="img-fluid info-logo mb-4" src="{{ 'assets/img/dsw_logo.svg' | relative_url }}">
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<p>With <a href="https://ds-wizard.org/">Data Stewardship Wizard</a> (DSW), you can create, plan, collaborate, and bring your data management plans to life with a tool trusted by thousands of people worldwide — from data management pioneers, to international research institutes.</p>
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<div class="row row-cols-1 row-cols-md-2 gy-2 gx-4 info-links">
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{%- for question in page.dsw %}
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<div class="col">
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<a class="btn text-start d-flex align-items-center h-100" href="{{ site.dsw_deep_link_prefix | append: question.uuid }}">
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{{question.name}}
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</a>
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</div>
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{%- endfor %}
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</div>
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</div>
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</div>
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{%- endif %}
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{%- if actual_rdmkit %}
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<!-- RDMkit -->
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<a data-bs-toggle="collapse" href="#rdmkit_collapse" role="button" aria-expanded="false" aria-controls="rdmkit_collapse" class="d-flex align-items-baseline pb-3 border-top info-collapse">
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<h3 class="mb-0 flex-grow-1 mt-3 text-dark">Links to RDMkit</h3><i class="fa-solid fa-chevron-down fs-5"></i>
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</a>
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<div class="collapse info-card" id="rdmkit_collapse">
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<div class="mt-2 p-3 pb-5">
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<img alt="RDMkit logo" class="img-fluid info-logo mb-4" src="{{ 'assets/img/rdmkit_logo.svg' | relative_url }}">
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<p><a href="https://rdmkit.elixir-europe.org/">RDMkit</a> is the Research Data Management toolkit for Life Sciences describing best practices and guidelines to help you make your data FAIR (Findable, Accessible, Interoperable and Reusable)</p>
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<div class="row row-cols-1 row-cols-md-2 gy-2 gx-4 info-links">
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{%- for rdmdoc in page.rdmkit %}
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<div class="col">
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{%- endif %}
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{%- endunless %}
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{%- endfor %}
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{%- if actual_related != nil %}
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-
<!--
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<!-- Related pages -->
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<h2>{{site.theme_variables.headings.related-pages | default: 'Related pages' }}</h2>
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-
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<div class="row row-cols-1 row-cols-md-2 g-4 mt-2">
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<div class="row row-cols-1 row-cols-md-2 g-4 mt-2 navigation-tiles">
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{%- if page.related_pages %}
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<!-- Related pages -->
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{%- if page_hit %}
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<div class="card-
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{
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{%-
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{%-
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{
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-
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<span>{{page_hit.title}}{% if page_hit.description %}</span><br><small class="text-muted">{{ page_hit.description }}</small>{% endif %}
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</a>
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{%- endfor %}
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{%- endfor %}
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<div class="card-body d-flex flex-column">
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{%- if page_hit.type_img %}
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<img src="{{page_hit.type_img | relative_url}}" class="type-icon me-2" alt="{{page_hit.type}} icon">
|
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{%- endif %}
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{%- if page_hit.type %}
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|
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{%- endif %}
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</div>
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<a class="stretched-link section-title" aria-label="Go to the {{page_hit.title}} page" href="{{ page_hit.url | relative_url }}">
|
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<b>{{page_hit.title}}</b>
|
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</a>
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{%- if page_hit.description %}
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<p class="card-text">{{ page_hit.description}}</p>
|
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{%- endif %}
|
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|
</div>
|
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|
</div>
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{%- endif %}
|
|
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|
+
{%- endfor %}
|
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|
{%- endunless %}
|
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|
{%- endfor %}
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|
{%- endif %}
|
|
@@ -1,15 +1,23 @@
|
|
|
1
1
|
{%- if include.tag %}
|
|
2
|
-
{%- assign tools = site.data.tool_and_resource_list | add_related_pages | where:"related_pages", include.tag
|
|
2
|
+
{%- assign tools = site.data.tool_and_resource_list | add_related_pages | where:"related_pages", include.tag | sort_natural: "name" %}
|
|
3
3
|
{%- else %}
|
|
4
|
-
{%- assign tools = site.data.tool_and_resource_list | add_related_pages
|
|
4
|
+
{%- assign tools = site.data.tool_and_resource_list | add_related_pages | sort_natural: "name" %}
|
|
5
5
|
{%- endif %}
|
|
6
6
|
{%- assign country_pages = site.pages | where_exp: "item", "item.search_exclude != true" | where_exp:"item","item.national_resources != nil" %}
|
|
7
7
|
{%- unless tools.size == 0 or tools == nil %}
|
|
8
8
|
{%- if include.tag %}
|
|
9
|
-
<h2>{{site.theme_variables.headings.resource-table-all | default: 'Tools and resources on this page' }}</h2>
|
|
10
|
-
{%- endif %}
|
|
11
9
|
<a class="visually-hidden-focusable" href='#skip-tool-table'>Skip tool table</a>
|
|
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|
-
|
|
10
|
+
{%- if site.theme_variables.headings.resource-table-all-collapse %}
|
|
11
|
+
<a data-bs-toggle="collapse" href="#tools_collapse" role="button" aria-expanded="false" aria-controls="tools_collapse" class="d-flex align-items-baseline pb-3 border-top info-collapse">
|
|
12
|
+
{%- endif %}
|
|
13
|
+
{% if site.theme_variables.headings.resource-table-all-collapse %}<h3 class="mb-0 mt-3 flex-grow-1 text-dark">{% else %}<h2 class="h2-like fs-2">{% endif %}{{site.theme_variables.headings.resource-table-all | default: 'Tools and resources on this page' }}{% if site.theme_variables.headings.resource-table-all-collapse %}</h3>{% else % %}</h2>{% endif %}
|
|
14
|
+
{%- if site.theme_variables.headings.resource-table-all-collapse %}
|
|
15
|
+
<i class="fa-solid fa-chevron-down fs-5"></i>
|
|
16
|
+
</a>
|
|
17
|
+
<div class="collapse info-card" id="tools_collapse">
|
|
18
|
+
{%- endif %}
|
|
19
|
+
{%- endif %}
|
|
20
|
+
<div class="table-responsive mt-4">
|
|
13
21
|
<table class="tooltable table display">
|
|
14
22
|
<thead>
|
|
15
23
|
<tr class="text-nowrap">
|
|
@@ -55,10 +63,10 @@
|
|
|
55
63
|
{%- if tool.how_to_access %}
|
|
56
64
|
<span class="d-inline-block" tabindex="0" data-bs-toggle="tooltip" title="{{tool.how_to_access}}"><span class="badge text-primary border border-primary"> <i class="fa-solid fa-key"></i></span></span>
|
|
57
65
|
{%- endif %}
|
|
58
|
-
{%- unless instances_tool == 0 or total_county_tools == 0 or include.tag == nil %}
|
|
59
|
-
<a href="#national-resources-button">
|
|
60
|
-
|
|
61
|
-
|
|
66
|
+
{%- unless instances_tool == 0 or total_county_tools == 0 or include.tag == nil %}
|
|
67
|
+
<!-- <a href="#national-resources-button">
|
|
68
|
+
<span class="badge text-white bg-primary"><i class="fa-solid fa-arrow-circle-down me-2"></i>Different instances available</span>
|
|
69
|
+
</a> -->
|
|
62
70
|
{%- endunless %}
|
|
63
71
|
</div>
|
|
64
72
|
{%- endif %}
|
|
@@ -67,35 +75,72 @@
|
|
|
67
75
|
{%- for tag in tool.related_pages %}
|
|
68
76
|
{%- unless tag == page.page_id %}
|
|
69
77
|
{%- assign related_page = site.pages | where:"page_id",tag | first %}
|
|
70
|
-
<a href="{{related_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{related_page.type | replace: '_', ' ' | capitalize}}"><span class="badge default-badge">{{ related_page.title | truncate: 25 }}</span></a>
|
|
78
|
+
<a href="{{related_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{related_page.type | replace: '_', ' ' | capitalize }}"><span class="badge default-badge">{{ related_page.title | truncate: 25 }}</span></a>
|
|
71
79
|
{%- endunless %}
|
|
72
80
|
{%- endfor %}
|
|
73
81
|
{%- endcapture %}
|
|
74
82
|
<td>{{related_pages}}</td>
|
|
75
83
|
<td>
|
|
76
|
-
{%- if tool.registry.biotools %}
|
|
84
|
+
{%- if tool.registry.biotools and tool.registry.biotools != "NA" %}
|
|
77
85
|
<a data-bs-toggle="tooltip" data-bs-original-title="Bio.tools" href="https://bio.tools/{{tool.registry.biotools}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-info me-2"></i>Tool info</span></a>
|
|
78
86
|
{%- endif %}
|
|
79
|
-
{%- if tool.registry.fairsharing %}
|
|
87
|
+
{%- if tool.registry.fairsharing and tool.registry.fairsharing != "NA" %}
|
|
80
88
|
<a data-bs-toggle="tooltip" data-bs-original-title="FAIRsharing" href="https://fairsharing.org/FAIRsharing.{{tool.registry.fairsharing}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-database me-2"></i>Standards/Databases</span></a>
|
|
81
89
|
{%- endif %}
|
|
82
|
-
{%- if tool.registry.fairsharing-coll %}
|
|
90
|
+
{%- if tool.registry.fairsharing-coll and tool.registry.fairsharing-coll != "NA" %}
|
|
83
91
|
<a data-bs-toggle="tooltip" data-bs-original-title="FAIRsharing collection" href="https://fairsharing.org/{{tool.registry.fairsharing-coll}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-database me-2"></i>Standards/Databases</span></a>
|
|
84
92
|
{%- endif %}
|
|
85
|
-
{%- if tool.registry.tess %}
|
|
93
|
+
{%- if tool.registry.tess and tool.registry.tess != "NA" %}
|
|
86
94
|
<a data-bs-toggle="tooltip" data-bs-original-title="TeSS" href="https://tess.elixir-europe.org/search?q={{tool.registry.tess}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-graduation-cap me-2"></i>Training</span></a>
|
|
87
95
|
{%- endif %}
|
|
88
|
-
{%- if tool.registry.europmc %}
|
|
96
|
+
{%- if tool.registry.europmc and tool.registry.europmc != "NA" %}
|
|
89
97
|
<a data-bs-toggle="tooltip" data-bs-original-title="EuroPMC" href="https://europepmc.org/article/MED/{{tool.registry.europmc}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-book me-2"></i>Publication</span></a>
|
|
90
98
|
{%- endif %}
|
|
91
99
|
</td>
|
|
92
100
|
</tr>
|
|
93
101
|
{%- endfor %}
|
|
94
|
-
|
|
95
|
-
|
|
96
|
-
|
|
102
|
+
</tbody>
|
|
103
|
+
</table>
|
|
104
|
+
</div>
|
|
105
|
+
{%- if include.tag %}
|
|
106
|
+
{%- if site.theme_variables.headings.resource-table-all-collapse %}
|
|
107
|
+
</div>
|
|
108
|
+
{%- endif %}
|
|
109
|
+
<div id="skip-tool-table"></div>
|
|
110
|
+
{%- endif %}
|
|
111
|
+
{%- unless total_county_tools == 0 or include.tag == nil %}
|
|
112
|
+
{%- if include.tag %}
|
|
113
|
+
<a class="visually-hidden-focusable" href='#skip-nat-tool-table'>Skip national tools table</a>
|
|
114
|
+
{%- if site.theme_variables.headings.resource-table-all-collapse %}
|
|
115
|
+
<a data-bs-toggle="collapse" href="#nat_tools_collapse" role="button" aria-expanded="false" aria-controls="nat_tools_collapse" class="d-flex align-items-baseline pb-3 border-top info-collapse">
|
|
116
|
+
{%- endif %}
|
|
117
|
+
<h3 class="{% if site.theme_variables.headings.resource-table-all-collapse %}mb-0 mt-3 flex-grow-1 text-dark {% endif %}">National resources</h3>
|
|
118
|
+
{%- if site.theme_variables.headings.resource-table-all-collapse %}
|
|
119
|
+
<i class="fa-solid fa-chevron-down fs-5"></i>
|
|
120
|
+
</a>
|
|
121
|
+
<div class="collapse info-card" id="nat_tools_collapse">
|
|
122
|
+
{%- endif %}
|
|
123
|
+
{%- endif %}
|
|
124
|
+
<p class="mt-4">Tools and resources tailored to users in different countries.</p>
|
|
125
|
+
<div class="table-responsive mt-3">
|
|
126
|
+
<table class="tooltable table display" id="national-resources-button">
|
|
127
|
+
<thead>
|
|
128
|
+
<tr class="text-nowrap">
|
|
129
|
+
<th>Tool or resource {%- if include.tag -%}
|
|
130
|
+
<a data-bs-toggle="tooltip" data-bs-original-title="This is a curated list which means that not all tools or resources that exist for this topic are listed here. This is mainly because we do not intend to be a registry. In most cases you will only find back the tools or resources that are mentioned in this page.">
|
|
131
|
+
<i class="fa-solid fa-info-circle"></i>
|
|
132
|
+
</a>{%- endif %}
|
|
133
|
+
</th>
|
|
134
|
+
<th>Description</th>
|
|
135
|
+
<th>Related pages</th>
|
|
136
|
+
<th>Registry {%- if include.tag -%}
|
|
137
|
+
<a data-bs-toggle="tooltip" data-bs-original-title="Links to related information in ELIXIR registries: related policies and standards in FAIRsharing, scientific and technical descriptions of the resource in bio.tools, and related training in TeSS.">
|
|
138
|
+
<i class="fa-solid fa-info-circle"></i>
|
|
139
|
+
</a>{%- endif %}
|
|
140
|
+
</th>
|
|
97
141
|
</tr>
|
|
98
|
-
|
|
142
|
+
</thead>
|
|
143
|
+
<tbody>
|
|
99
144
|
{%- assign hide_ids = "resource_title" %}
|
|
100
145
|
{%- for country_page in country_pages %}
|
|
101
146
|
{%- if include.tag %}
|
|
@@ -106,7 +151,7 @@
|
|
|
106
151
|
{%- for tool in tool_matches %}
|
|
107
152
|
{%- assign tool_id = tool.name | slugify %}
|
|
108
153
|
{%- assign hide_ids = hide_ids | append: " " | append: tool_id %}
|
|
109
|
-
<tr
|
|
154
|
+
<tr>
|
|
110
155
|
{% if tool.url %}
|
|
111
156
|
<td><a href="{{tool.url}}">{{tool.name}}</a><a href="{{country_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{country_page.title}}"><span class="flag-icon ms-2 shadow-sm flag-icon-{{country_page.country_code | downcase }}"></span></a></td>
|
|
112
157
|
{%- else %}
|
|
@@ -132,7 +177,7 @@
|
|
|
132
177
|
{%- for tag in section[1] %}
|
|
133
178
|
{%- unless tag == page.page_id %}
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134
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{%- assign related_page = site.pages | where:"page_id",tag | first %}
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135
|
-
<a class="nohover" href="{{related_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{related_page.type | replace: '_', ' ' | capitalize}}"><span class="badge default-badge">{{ related_page.title | truncate: 25 }}</span></a>
|
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180
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+
<a class="nohover" href="{{related_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{related_page.type | replace: '_', ' ' | capitalize }}"><span class="badge default-badge">{{ related_page.title | truncate: 25 }}</span></a>
|
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136
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|
{%- endunless %}
|
|
137
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|
{%- endfor %}
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|
138
183
|
{%- endunless %}
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|
@@ -143,19 +188,19 @@
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|
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143
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|
<td></td>
|
|
144
189
|
{%- endif %}
|
|
145
190
|
<td>
|
|
146
|
-
{%- if tool.registry.biotools %}
|
|
191
|
+
{%- if tool.registry.biotools and tool.registry.biotools != "NA" %}
|
|
147
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|
<a data-bs-toggle="tooltip" data-bs-original-title="Bio.tools" href="https://bio.tools/{{tool.registry.biotools}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-info me-2"></i>Tool info</span></a>
|
|
148
193
|
{%- endif %}
|
|
149
|
-
{%- if tool.registry.fairsharing %}
|
|
194
|
+
{%- if tool.registry.fairsharing and tool.registry.fairsharing != "NA" %}
|
|
150
195
|
<a data-bs-toggle="tooltip" data-bs-original-title="FAIRsharing" href="https://fairsharing.org/FAIRsharing.{{tool.registry.fairsharing}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-database me-2"></i>Standards/Databases</span></a>
|
|
151
196
|
{%- endif %}
|
|
152
|
-
{%- if tool.registry.fairsharing-coll %}
|
|
197
|
+
{%- if tool.registry.fairsharing-coll and tool.registry.fairsharing-coll != "NA" %}
|
|
153
198
|
<a data-bs-toggle="tooltip" data-bs-original-title="FAIRsharing collection" href="https://fairsharing.org/{{tool.registry.fairsharing-coll}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-database me-2"></i>Standards/Databases</span></a>
|
|
154
199
|
{%- endif %}
|
|
155
|
-
{%- if tool.registry.tess %}
|
|
200
|
+
{%- if tool.registry.tess and tool.registry.tess != "NA" %}
|
|
156
201
|
<a data-bs-toggle="tooltip" data-bs-original-title="TeSS" href="https://tess.elixir-europe.org/search?q={{tool.registry.tess}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-graduation-cap me-2"></i>Training</span></a>
|
|
157
202
|
{%- endif %}
|
|
158
|
-
{%- if tool.registry.europmc %}
|
|
203
|
+
{%- if tool.registry.europmc and tool.registry.europmc != "NA" %}
|
|
159
204
|
<a data-bs-toggle="tooltip" data-bs-original-title="EuroPMC" href="https://europepmc.org/article/MED/{{tool.registry.europmc}}"><span class="badge bg-dark text-white hover-primary"><i class="fa-solid fa-book me-2"></i>Publication</span></a>
|
|
160
205
|
{%- endif %}
|
|
161
206
|
</td>
|
|
@@ -165,10 +210,11 @@
|
|
|
165
210
|
</tbody>
|
|
166
211
|
</table>
|
|
167
212
|
</div>
|
|
168
|
-
{%-
|
|
169
|
-
|
|
170
|
-
|
|
171
|
-
|
|
213
|
+
{%- if include.tag %}
|
|
214
|
+
{%- if site.theme_variables.headings.resource-table-all-collapse %}
|
|
215
|
+
</div>
|
|
216
|
+
{%- endif %}
|
|
217
|
+
<div id="skip-nat-tool-table"></div>
|
|
218
|
+
{%- endif %}
|
|
172
219
|
{%- endunless %}
|
|
173
|
-
<div id="skip-tool-table"></div>
|
|
174
220
|
{%- endunless %}
|