elixir-toolkit-theme 1.20.0 → 1.20.2

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data/README.md CHANGED
@@ -108,6 +108,7 @@ This will start the docker container and serve the website locally. Make sure th
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  - [Applied Bioinformatics and Biostatistics intranet page](https://intranet.psb.ugent.be/abb/)
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  - [FAIRDOM](https://fair-dom.org/)
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110
  - [Australian BioCommons How-to-Guides](https://australianbiocommons.github.io/how-to-guides/)
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+ - [Human 'Omics Data Sharing Field Guide](https://australianbiocommons.github.io/human-omics-data-sharing-field-guide/)
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  ## Used packages
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@@ -3,7 +3,7 @@
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  {%- assign allcontributors = include.custom | split: ", " | sort %}
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  {%- else %}
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  {%- for page in site.pages %}
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- {%- if page.contributors and page.search_exclude != true %}
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+ {%- if page.contributors and page.search_exclude != true and page.contributors.size != 0 %}
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  {%- assign pagecontr = page.contributors | join: ", " %}
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  {%- if allcontrstr %}
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  {%- assign allcontrstr = allcontrstr | append: ", " | append: pagecontr %}
@@ -49,33 +49,31 @@
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  <div class="card h-100 info-card">
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  <div class="card-header fw-bold">Training</div>
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  <div class="card-body">
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- <ul class="list-unstyled">
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+ <div class="d-grid gap-2">
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  {%- for training in page.training %}
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- <li class="d-grid">
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- <a class="btn bg-white hover-primary text-start" href="{{ training.url }}">
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- <div class="row g-1">
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- <div class="col-2 d-flex align-items-center justify-content-center">
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- {%- assign registry = training.registry | downcase %}
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- {%- if registry == "tess" %}
60
- <img alt="TeSS logo" class="img-fluid" src="{{ 'assets/img/tess_logo.svg' | relative_url }}">
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- {%- elsif registry == "zenodo" %}
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- <img alt="Zenodo logo" class="img-fluid" src="{{ 'assets/img/zenodo_logo.svg' | relative_url }}">
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- {%- elsif registry == "youtube" %}
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- <img alt="Youtube logo" class="img-fluid" src="{{ 'assets/img/youtube_logo.svg' | relative_url }}">
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- {%- elsif registry == "carpentries" %}
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- <img alt="Carpentries" class="img-fluid" src="{{ 'assets/img/carpentries_logo.svg' | relative_url }}">
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- {%- else %}
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- <i class="fa-solid fa-external-link-alt text-primary fs-5"></i>
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- {%- endif %}
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- </div>
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- <div class="col-10 d-flex align-items-center">
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- <span class="text-start">{{training.name}}</span>
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- </div>
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+ <a class="btn bg-white hover-primary text-start d-block" href="{{ training.url }}">
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+ <div class="row g-1">
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+ <div class="col-2 d-flex align-items-center justify-content-center">
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+ {%- assign registry = training.registry | downcase %}
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+ {%- if registry == "tess" %}
59
+ <img alt="TeSS logo" class="img-fluid" src="{{ 'assets/img/tess_logo.svg' | relative_url }}">
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+ {%- elsif registry == "zenodo" %}
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+ <img alt="Zenodo logo" class="img-fluid" src="{{ 'assets/img/zenodo_logo.svg' | relative_url }}">
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+ {%- elsif registry == "youtube" %}
63
+ <img alt="Youtube logo" class="img-fluid" src="{{ 'assets/img/youtube_logo.svg' | relative_url }}">
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+ {%- elsif registry == "carpentries" %}
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+ <img alt="Carpentries" class="img-fluid" src="{{ 'assets/img/carpentries_logo.svg' | relative_url }}">
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+ {%- else %}
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+ <i class="fa-solid fa-external-link-alt text-primary fs-5"></i>
68
+ {%- endif %}
74
69
  </div>
75
- </a>
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- </li>
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+ <div class="col-10 d-flex align-items-center">
71
+ <span class="text-start">{{training.name}}</span>
72
+ </div>
73
+ </div>
74
+ </a>
77
75
  {%- endfor %}
78
- </ul>
76
+ </div>
79
77
  </div>
80
78
  </div>
81
79
  </div>
@@ -86,72 +84,64 @@
86
84
  <div class="card h-100 info-card">
87
85
  <div class="card-header fw-bold">Links to other ELIXIR resources</div>
88
86
  <div class="card-body">
89
- <ul class="list-unstyled">
87
+ <div class="d-grid gap-2">
90
88
  {%- if actual_faircookbook %}
91
89
  {%- for recipe in page.faircookbook %}
92
- <li class="d-grid">
93
- <a class="btn bg-white hover-primary text-start" data-bs-toggle="tooltip" data-bs-placement="right" title="FAIRCookbook" href="{{ recipe.url }}">
94
- <div class="row g-1">
95
- <div class="col-2 d-flex align-items-center justify-content-center">
96
- <img alt="FAIRCookbook logo" class="img-fluid" src="{{ 'assets/img/fairplus_compact_logo.svg' | relative_url }}">
97
- </div>
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- <div class="col-10 d-flex align-items-center">
99
- <span class="text-start">Step-by-step process for: {{recipe.name}}</span>
100
- </div>
90
+ <a class="btn bg-white hover-primary text-start d-block" data-bs-toggle="tooltip" data-bs-placement="right" title="FAIRCookbook" href="{{ recipe.url }}">
91
+ <div class="row g-1">
92
+ <div class="col-2 d-flex align-items-center justify-content-center">
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+ <img alt="FAIRCookbook logo" class="img-fluid" src="{{ 'assets/img/fairplus_compact_logo.svg' | relative_url }}">
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+ </div>
95
+ <div class="col-10 d-flex align-items-center">
96
+ <span class="text-start">Step-by-step process for: {{recipe.name}}</span>
101
97
  </div>
102
- </a>
103
- </li>
98
+ </div>
99
+ </a>
104
100
  {%- endfor %}
105
101
  {%- endif %}
106
102
  {%- if actual_dsw %}
107
103
  {%- for question in page.dsw %}
108
- <li class="d-grid">
109
- <a class="btn bg-white hover-primary text-start" data-bs-toggle="tooltip" data-bs-placement="right" title="DSW" href="{{ site.dsw_deep_link_prefix | append: question.uuid }}">
110
- <div class="row g-1">
111
- <div class="col-2 d-flex align-items-center justify-content-center">
112
- <img alt="DSW logo" class="img-fluid" src="{{ 'assets/img/dsw_compact_logo.svg' | relative_url }}">
113
- </div>
114
- <div class="col-10 d-flex align-items-center">
115
- <span class="text-start">Support for DMP on: {{question.name}}</span>
116
- </div>
104
+ <a class="btn bg-white hover-primary text-start d-block" data-bs-toggle="tooltip" data-bs-placement="right" title="DSW" href="{{ site.dsw_deep_link_prefix | append: question.uuid }}">
105
+ <div class="row g-1">
106
+ <div class="col-2 d-flex align-items-center justify-content-center">
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+ <img alt="DSW logo" class="img-fluid" src="{{ 'assets/img/dsw_compact_logo.svg' | relative_url }}">
108
+ </div>
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+ <div class="col-10 d-flex align-items-center">
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+ <span class="text-start">Support for DMP on: {{question.name}}</span>
117
111
  </div>
118
- </a>
119
- </li>
112
+ </div>
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+ </a>
120
114
  {%- endfor %}
121
115
  {%- endif %}
122
116
  {%- if actual_fairsharing %}
123
117
  {%- for standard in page.fairsharing %}
124
- <li class="d-grid">
125
- <a class="btn bg-white hover-primary text-start" data-bs-toggle="tooltip" data-bs-placement="right" title="FAIRsharing" href="{{ standard.url }}">
126
- <div class="row g-1">
127
- <div class="col-2 d-flex align-items-center justify-content-center">
128
- <img alt="FAIRsharing logo" class="img-fluid" src="{{ 'assets/img/fairsharing_compact_logo.svg' | relative_url }}">
129
- </div>
130
- <div class="col-10 d-flex align-items-center">
131
- <span class="text-start">FAIRsharing collection about: {{standard.name}}</span>
132
- </div>
118
+ <a class="btn bg-white hover-primary text-start d-block" data-bs-toggle="tooltip" data-bs-placement="right" title="FAIRsharing" href="{{ standard.url }}">
119
+ <div class="row g-1">
120
+ <div class="col-2 d-flex align-items-center justify-content-center">
121
+ <img alt="FAIRsharing logo" class="img-fluid" src="{{ 'assets/img/fairsharing_compact_logo.svg' | relative_url }}">
133
122
  </div>
134
- </a>
135
- </li>
123
+ <div class="col-10 d-flex align-items-center">
124
+ <span class="text-start">FAIRsharing collection about: {{standard.name}}</span>
125
+ </div>
126
+ </div>
127
+ </a>
136
128
  {%- endfor %}
137
129
  {%- endif %}
138
130
  {%- if actual_rdmkit %}
139
131
  {%- for rdmdoc in page.rdmkit %}
140
- <li class="d-grid">
141
- <a class="btn bg-white hover-primary text-start" data-bs-toggle="tooltip" data-bs-placement="right" title="RDMkit" href="{{ rdmdoc.url }}">
142
- <div class="row g-1">
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- <div class="col-2 d-flex align-items-center justify-content-center">
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- <img alt="RDMkit logo" class="img-fluid" src="{{ 'assets/img/rdmkit_compact_logo.svg' | relative_url }}">
145
- </div>
146
- <div class="col-10 d-flex align-items-center">
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- <span class="text-start">Data management guidelines on: {{rdmdoc.name}}</span>
148
- </div>
132
+ <a class="btn bg-white hover-primary text-start d-block" data-bs-toggle="tooltip" data-bs-placement="right" title="RDMkit" href="{{ rdmdoc.url }}">
133
+ <div class="row g-1">
134
+ <div class="col-2 d-flex align-items-center justify-content-center">
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+ <img alt="RDMkit logo" class="img-fluid" src="{{ 'assets/img/rdmkit_compact_logo.svg' | relative_url }}">
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+ </div>
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+ <div class="col-10 d-flex align-items-center">
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+ <span class="text-start">Data management guidelines on: {{rdmdoc.name}}</span>
149
139
  </div>
150
- </a>
151
- </li>
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+ </div>
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+ </a>
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142
  {%- endfor %}
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143
  {%- endif %}
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- </ul>
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+ </div>
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145
  </div>
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146
  </div>
157
147
  </div>
@@ -17,17 +17,17 @@
17
17
  <div class="card h-100 info-card">
18
18
  <div class="card-header fw-bold">{{ section[0] | replace: "_", " " | capitalize }}</div>
19
19
  <div class="card-body">
20
- <ul class="list-unstyled">
20
+ <div class="d-grid gap-2">
21
21
  {%- for page_id in section[1] %}
22
22
  {%- assign section_pages = site.pages | where:"type", section[0] %}
23
23
  {%- assign metadata = section_pages | where:"page_id", page_id %}
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24
  {%- for page_hit in metadata %}
25
- <li class="d-grid">
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- <a class="btn bg-white hover-primary text-start" href="{{ page_hit.url | relative_url }}"><span>{{page_hit.title}}{% if page_hit.description %}</span><br><small class="text-muted">{{ page_hit.description }}</small>{% endif %}</a>
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- </li>
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+ <a class="btn bg-white hover-primary text-start d-block" href="{{ page_hit.url | relative_url }}">
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+ <span>{{page_hit.title}}{% if page_hit.description %}</span><br><small class="text-muted">{{ page_hit.description }}</small>{% endif %}
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+ </a>
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  {%- endfor %}
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  {%- endfor %}
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- </ul>
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+ </div>
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  </div>
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  </div>
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  </div>
@@ -140,7 +140,7 @@
140
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  <div class="me-3">
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141
  <span class="me-2"><b><small>Affiliations:</small></b></span>
142
142
  {%- for affiliation in current_page.affiliations %}
143
- {%- assign filter_affiliation = alllogos | where: "name", affiliation %}
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+ {%- assign filter_affiliation = alllogos | where: "name", affiliation | first %}
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  {%- assign country = affiliation | upcase %}
145
145
  {%- if affiliation.size == 2 %}
146
146
  {%- assign country_link = site.pages | where:"country_code",country | first %}
@@ -153,14 +153,16 @@
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  <span class="flag-icon flag-icon-{{affiliation | downcase}} align-items-center"></span>
154
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  </div>
155
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  </a>
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- {%- elsif filter_affiliation %}
157
- {%- for result in filter_affiliation %}
158
- <a role="button" href="{{result.url}}" data-bs-toggle="tooltip" data-bs-original-title="{{affiliation}}" class="btn btn-sm bg-white hover-primary">
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- <img alt="logo of {{result.name}}" src="{{result.image_url | relative_url }}" class="d-inline h-24px">
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- </a>
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- {%- endfor %}
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+ {%- elsif filter_affiliation %}
157
+ <a role="button" href="{{filter_affiliation.url}}" data-bs-toggle="tooltip" data-bs-original-title="{{affiliation}}" class="btn btn-sm bg-white hover-primary">
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+ {%- if filter_affiliation.image_url %}
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+ <img alt="logo of {{filter_affiliation.name}}" src="{{filter_affiliation.image_url | relative_url }}" class="d-inline h-24px">
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+ {%- else %}
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+ {{filter_affiliation.name}}
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  {%- endif %}
163
- {%- endfor %}
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+ </a>
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+ {%- endif %}
165
+ {%- endfor %}
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  </div>
165
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  </div>
166
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  {%- endif %}
data/assets/css/main.scss CHANGED
@@ -170,11 +170,11 @@ header .navbar {
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  // Break line in top navigation
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172
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  .nav-break {
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- @media (min-width: 992px) {
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+ @include media-breakpoint-up(lg) {
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  width: 1px;
175
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  }
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177
- @media (max-width: 992px) {
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+ @include media-breakpoint-down(lg) {
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  height: 1px;
179
179
  }
180
180
  }
@@ -210,7 +210,7 @@ header .navbar {
210
210
  }
211
211
  }
212
212
 
213
- @media (max-width: 992px) {
213
+ @include media-breakpoint-down(lg) {
214
214
  .search-results {
215
215
  width: 100%;
216
216
  }
@@ -282,7 +282,7 @@ header .navbar {
282
282
 
283
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  /*-----Sidebar-----*/
284
284
 
285
- @media (min-width: 992px) {
285
+ @include media-breakpoint-up(lg) {
286
286
  #side-nav {
287
287
  display: block !important;
288
288
  }
@@ -522,7 +522,7 @@ footer {
522
522
  width: 3%;
523
523
  }
524
524
 
525
- @media (max-width: 768px) {
525
+ @include media-breakpoint-down(md) {
526
526
  #contributors-carousel .card-title {
527
527
  font-size: 0.5em;
528
528
  }
@@ -546,7 +546,7 @@ footer {
546
546
  text-align: center;
547
547
  }
548
548
 
549
- @media (max-width: 768px) {
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+ @include media-breakpoint-down(md) {
550
550
  #contributors-carousel .social-icons {
551
551
  line-height: 1.2ex;
552
552
  width: 1.2ex;
metadata CHANGED
@@ -1,14 +1,14 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: elixir-toolkit-theme
3
3
  version: !ruby/object:Gem::Version
4
- version: 1.20.0
4
+ version: 1.20.2
5
5
  platform: ruby
6
6
  authors:
7
7
  - bedroesb
8
8
  autorequire:
9
9
  bindir: bin
10
10
  cert_chain: []
11
- date: 2022-10-24 00:00:00.000000000 Z
11
+ date: 2022-11-03 00:00:00.000000000 Z
12
12
  dependencies:
13
13
  - !ruby/object:Gem::Dependency
14
14
  name: jekyll