elixir-toolkit-theme 1.15.2 → 1.16.0

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data/README.md CHANGED
@@ -104,7 +104,7 @@ This will start the docker container and serve the website locally. Make sure th
104
104
  - [Infectious Diseases Toolkit](https://www.infectious-diseases-toolkit.org/)
105
105
  - [Applied Bioinformatics and Biostatistics intranet page](https://intranet.psb.ugent.be/abb/)
106
106
  - [FAIRDOM](https://fair-dom.org/)
107
-
107
+ - [Australian BioCommons How-to-Guides](https://australianbiocommons.github.io/how-to-guides/)
108
108
 
109
109
  ## Used packages
110
110
 
@@ -6,7 +6,7 @@
6
6
  <div class="col">
7
7
  <div class="card h-100 border-0">
8
8
  <div class="my-auto d-flex justify-content-center">
9
- {% if affiliation.url %}<a href="{{ affiliation.url }}">{% endif %}<img class="rounded w-100" src="{{ affiliation.image_url | relative_url }}" alt="{{ affiliation.name }}">{%- if affiliation.url %}</a>{% endif %}
9
+ {% if affiliation.url %}<a class="w-100" href="{{ affiliation.url }}">{% endif %}<img class="rounded" src="{{ affiliation.image_url | relative_url }}" alt="{{ affiliation.name }}">{%- if affiliation.url %}</a>{% endif %}
10
10
  </div>
11
11
  </div>
12
12
  </div>
@@ -1,5 +1,5 @@
1
1
  {%- if page.contributors and page.contributors.size != 0 %}
2
- <span class="d-block h2-like fs-2 text-dark">Contributors</span>
2
+ <span class="d-block h2-like fs-2">Contributors</span>
3
3
  <div class="p-4 rounded mt-4 page-contributors">
4
4
  {%- assign contributors = site.data.CONTRIBUTORS %}
5
5
  {%- assign page_contributors = page.contributors | sort %}
@@ -7,7 +7,7 @@
7
7
  {%- assign id = contributors[contributor].git | default: 'no_github' %}
8
8
  {%- capture html_code %}
9
9
  {%- assign stripped_name = contributor | replace: "'", "’" %}
10
- <div class="card bg-white">
10
+ <div class="card">
11
11
  {%- assign id = contributors[contributor].git | default: 'no_github' %}
12
12
  <div class="position-relative d-flex justify-content-center">
13
13
  {%- if contributors[contributor].image_url %}
@@ -26,7 +26,7 @@
26
26
  {%- endif %}
27
27
  </div>
28
28
  {%- if contributors[contributor].git or contributors[contributor].email or contributors[contributor].orcid %}
29
- <div class="card-footer bg-dark">
29
+ <div class="card-footer">
30
30
  <div class="d-flex justify-content-center">
31
31
  {%- if contributors[contributor].git %}
32
32
  <div class="mx-1"><a class="btn bg-white text-primary hover-primary rounded-circle social-icons p-0" href="https://github.com/{{id}}"><i class="fa-brands fa-github"></i></a></div>
data/_includes/image.html CHANGED
@@ -1,21 +1,21 @@
1
- <figure class="{% if {{include.inline}} == true %}my-0{% else %}my-4{%- endif %} {% if {{include.class}} %}{{include.class}}{%- endif %}"{% if {{include.max-width}} %}width={{include.max-width}}{%- endif %}>
1
+ <figure class="{% if include.inline == true %}my-0{% else %}my-4{%- endif %} {% if include.class %}{{include.class}}{%- endif %}" {% if include.max-width %}style="max-width:{{include.max-width}}"{% endif %}>
2
2
  {%- capture file_url -%}
3
3
  {{ "/images/" | append:include.file | relative_url }}
4
4
  {%- endcapture -%}
5
- {%- if {{include.url}} %}
5
+ {%- if include.url %}
6
6
  <a target="_blank" rel="noopener" href="{{include.url}}">
7
7
  {%- elsif {{include.click}} == true %}
8
8
  <a target="_blank" rel="noopener noreferrer" href="{{file_url}}">
9
9
  {%- endif %}
10
10
  <img src="{{file_url}}" alt="{{include.alt}}" class="figure-img img-fluid rounded"/>
11
- {%- if {{include.url}} or {{include.click}} == true %}
11
+ {%- if include.url or include.click == true %}
12
12
  </a>
13
13
  {%- endif %}
14
- {%- if {{include.caption}} %}
14
+ {%- if include.caption %}
15
15
  <figcaption class="figure-caption">
16
16
  {{include.caption}}
17
17
  </figcaption>
18
18
  {%- endif %}
19
- {%- if {{include.inline}} != true %}
19
+ {%- if include.inline != true %}
20
20
  </figure>
21
21
  {%- endif %}
data/_includes/news.html CHANGED
@@ -31,6 +31,6 @@
31
31
  {%- endfor %}
32
32
  </ul>
33
33
  {%- if include.caption == "true" %}
34
- <small>For more news please visit our <a href="/news">news page</a>.</small>
34
+ <small>For more news please visit our <a href="{{ '/news' | relative_url }}">news page</a>.</small>
35
35
  {%- endif %}
36
36
  </div>
@@ -7,4 +7,4 @@ $dark: #212529;
7
7
  /*-----Custom values for Bootstrap variables-----*/
8
8
  $link-decoration: none;
9
9
  $nav-link-color: $dark;
10
- $nav-link-hover-color: $primary;
10
+ $nav-link-hover-color: $primary;
@@ -1,70 +0,0 @@
1
- /*-----General styling-----*/
2
- $font-family-theme: system-ui, -apple-system, "Segoe UI", Roboto, "Helvetica Neue", Arial, "Noto Sans", "Liberation Sans", sans-serif, "Apple Color Emoji", "Segoe UI Emoji", "Segoe UI Symbol", "Noto Color Emoji" !default;
3
- $h2-color: $primary;
4
-
5
- /*-----Buttons hover style-----*/
6
- $btn-primary-bg-hover: $primary;
7
- $btn-primary-color-hover: $white;
8
-
9
- /*-----Top navigation-----*/
10
- $topnav-bg: $light;
11
- $topnav-title-color: $primary;
12
- $topnav-brand-height: 44px;
13
-
14
- /*-----Search-----*/
15
- $search-result-color: $primary;
16
-
17
- /*-----Sidebar-----*/
18
- $sidebar-bg: $light;
19
- $sidebar-color: $dark;
20
- $sidebar-lvl2-bg: $white;
21
- $sidebar-lvl2-color: $dark;
22
- $sidebar-lvl3-bg: $white;
23
- $sidebar-lvl3-color: $dark;
24
- $sidebar-bg-active: $primary;
25
- $sidebar-color-active: $white;
26
-
27
- /*-----TOC-----*/
28
- $toc-bg: $light;
29
-
30
- /*-----Section navigation tiles-----*/
31
- $nav-card-bg: $white;
32
- $nav-card-header-bg: $dark;
33
- $nav-card-header-color: $white;
34
- $nav-card-badge-color: $body-color;
35
- $nav-card-badge-bg: $light;
36
- $nav-card-badge-color-hover: $white;
37
- $nav-card-badge-bg-hover: $primary;
38
-
39
- /*-----More information tiles-----*/
40
- $info-card-bg: $light;
41
- $info-card-header-bg: $dark;
42
- $info-card-header-color: $white;
43
-
44
- /*-----Contributors-cards-----*/
45
- $contr-card-bg: $light;
46
-
47
- /*-----Page contributors-----*/
48
- $contr-bg: $light;
49
- $contr-link-bg: $white;
50
- $contr-crown-bg: $dark;
51
- $contr-crown-color: $white;
52
-
53
- /*-----Events & news-----*/
54
- $news-title-bg: $primary;
55
- $news-border-color: $light;
56
- $news-title-color: $white;
57
-
58
- /*-----Default badge-----*/
59
- $badge-color: $body-color;
60
- $badge-bg: $light;
61
- $badge-color-hover: $white;
62
- $badge-bg-hover: $primary;
63
-
64
- /*-----Footer-----*/
65
- $footer-bg: $light;
66
- $footer-color: $dark;
67
- $footer-link-color: $dark;
68
- $footer-link-color-hover: $primary;
69
- $footer-copyright-bg: $gray-200;
70
-
@@ -0,0 +1,70 @@
1
+ /*-----General styling-----*/
2
+ $font-family-theme: system-ui, -apple-system, "Segoe UI", Roboto, "Helvetica Neue", Arial, "Noto Sans", "Liberation Sans", sans-serif, "Apple Color Emoji", "Segoe UI Emoji", "Segoe UI Symbol", "Noto Color Emoji" !default;
3
+ $h2-color: $primary;
4
+
5
+ /*-----Buttons hover style-----*/
6
+ $btn-primary-bg-hover: $primary;
7
+ $btn-primary-color-hover: $white;
8
+
9
+ /*-----Top navigation-----*/
10
+ $topnav-bg: $light;
11
+ $topnav-title-color: $primary;
12
+ $topnav-brand-height: 44px;
13
+
14
+ /*-----Search-----*/
15
+ $search-result-color: $primary;
16
+
17
+ /*-----Sidebar-----*/
18
+ $sidebar-bg: $light;
19
+ $sidebar-color: $dark;
20
+ $sidebar-lvl2-bg: $white;
21
+ $sidebar-lvl2-color: $dark;
22
+ $sidebar-lvl3-bg: $white;
23
+ $sidebar-lvl3-color: $dark;
24
+ $sidebar-bg-active: $primary;
25
+ $sidebar-color-active: $white;
26
+
27
+ /*-----TOC-----*/
28
+ $toc-bg: $light;
29
+
30
+ /*-----Section navigation tiles-----*/
31
+ $nav-card-bg: $white;
32
+ $nav-card-header-bg: $secondary;
33
+ $nav-card-header-color: $white;
34
+ $nav-card-badge-color: $body-color;
35
+ $nav-card-badge-bg: $light;
36
+ $nav-card-badge-color-hover: $white;
37
+ $nav-card-badge-bg-hover: $primary;
38
+
39
+ /*-----More information tiles-----*/
40
+ $info-card-bg: $light;
41
+ $info-card-header-bg: $secondary;
42
+ $info-card-header-color: $white;
43
+
44
+ /*-----Contributors-cards-----*/
45
+ $contr-card-bg: $light;
46
+
47
+ /*-----Page contributors-----*/
48
+ $contr-bg: $light;
49
+ $contr-link-bg: $white;
50
+ $contr-crown-bg: $dark;
51
+ $contr-crown-color: $white;
52
+ $contr-popover-bg: $white;
53
+
54
+ /*-----Events & news-----*/
55
+ $news-title-bg: $primary;
56
+ $news-border-color: $light;
57
+ $news-title-color: $white;
58
+
59
+ /*-----Default badge-----*/
60
+ $badge-color: $body-color;
61
+ $badge-bg: $light;
62
+ $badge-color-hover: $white;
63
+ $badge-bg-hover: $primary;
64
+
65
+ /*-----Footer-----*/
66
+ $footer-bg: $light;
67
+ $footer-color: $dark;
68
+ $footer-link-color: $dark;
69
+ $footer-link-color-hover: $primary;
70
+ $footer-copyright-bg: $gray-200;
data/assets/css/main.scss CHANGED
@@ -1,12 +1,14 @@
1
- ---
1
+ ---
2
2
  layout: none
3
3
  permalink: assets/css/main.css
4
4
  ---
5
+
5
6
  /*-----Default theme variables-----*/
6
7
  $popover-max-width: 12em;
7
8
  $enable-caret: false;
8
9
  @import "bootstrap_variables";
9
10
  @import "bootstrap/bootstrap";
11
+ @import "variables";
10
12
  @import "custom_variables";
11
13
 
12
14
  /*-----General styling-----*/
@@ -17,6 +19,7 @@ main {
17
19
  font-weight: 400;
18
20
  margin-bottom: $spacer * 1.5;
19
21
  }
22
+
20
23
  h2,
21
24
  .h2-like {
22
25
  font-family: $font-family-theme;
@@ -36,11 +39,11 @@ main {
36
39
  margin-top: $spacer * 1.5;
37
40
  }
38
41
 
39
- h2 + h3 {
42
+ h2+h3 {
40
43
  margin-top: $spacer * 0.5;
41
44
  }
42
45
 
43
- h3 + h4 {
46
+ h3+h4 {
44
47
  margin-top: $spacer * 0.25;
45
48
  }
46
49
 
@@ -67,11 +70,11 @@ main {
67
70
  }
68
71
 
69
72
  .ff-body {
70
- font-family: $font-family-sans-serif !important;
73
+ font-family: $font-family-sans-serif !important;
71
74
  }
72
75
 
73
76
  .ff-theme {
74
- font-family: $font-family-theme !important;
77
+ font-family: $font-family-theme !important;
75
78
  }
76
79
 
77
80
  /*-----Blockquote-----*/
@@ -139,8 +142,10 @@ pre code {
139
142
 
140
143
  header .navbar {
141
144
  background-color: $topnav-bg;
145
+
142
146
  .navbar-brand {
143
147
  color: $topnav-title-color;
148
+
144
149
  img {
145
150
  height: $topnav-brand-height;
146
151
  }
@@ -160,8 +165,9 @@ header .navbar {
160
165
  content: "\f0d7";
161
166
  transition: transform 0.2s ease-in-out;
162
167
  }
168
+
163
169
  .dropdown-toggle[aria-expanded="true"]::after {
164
- transform: rotate(-180deg);
170
+ transform: rotate(-180deg);
165
171
  }
166
172
 
167
173
  // Break line in top navigation
@@ -170,9 +176,11 @@ header .navbar {
170
176
  @media (min-width: 992px) {
171
177
  width: 1px;
172
178
  }
179
+
173
180
  @media (max-width: 992px) {
174
181
  height: 1px;
175
182
  }
183
+
176
184
  background-color: rgba($nav-link-color, 0.3);
177
185
  }
178
186
 
@@ -206,6 +214,7 @@ header .navbar {
206
214
  background-color: $light;
207
215
  }
208
216
  }
217
+
209
218
  @media (max-width: 992px) {
210
219
  .search-results {
211
220
  width: 100%;
@@ -228,6 +237,7 @@ header .navbar {
228
237
  font-size: 12px !important;
229
238
  font-weight: 600;
230
239
  }
240
+
231
241
  .search-result-doc-title {
232
242
  overflow: auto;
233
243
  color: $body-color;
@@ -259,7 +269,7 @@ header .navbar {
259
269
  vertical-align: top;
260
270
  }
261
271
 
262
- .search-result-preview + .search-result-preview {
272
+ .search-result-preview+.search-result-preview {
263
273
  margin-top: 0.25rem;
264
274
  }
265
275
 
@@ -285,6 +295,7 @@ header .navbar {
285
295
 
286
296
  .sidebar-collapse {
287
297
  background-color: $sidebar-bg;
298
+
288
299
  i {
289
300
  font-size: 1.25rem;
290
301
  float: right;
@@ -298,19 +309,20 @@ header .navbar {
298
309
  }
299
310
 
300
311
  #side-nav>ul {
301
- > li:not(.sidebar-title) > a {
312
+ >li:not(.sidebar-title)>a {
302
313
  background-color: $sidebar-bg;
303
314
  color: $sidebar-color;
304
315
  }
305
- li > a {
306
- > span {
316
+
317
+ li>a {
318
+ >span {
307
319
  float: right;
308
320
  width: 15px;
309
321
  margin-left: $btn-padding-x;
310
322
  text-align: center;
311
323
  }
312
324
 
313
- > span:after {
325
+ >span:after {
314
326
  display: inline-block;
315
327
  font-style: normal;
316
328
  font-variant: normal;
@@ -322,23 +334,28 @@ header .navbar {
322
334
  transition: transform 0.2s ease-in-out;
323
335
  }
324
336
  }
337
+
325
338
  li.active {
326
- &:not(.parent) > a {
339
+ &:not(.parent)>a {
327
340
  background-color: $sidebar-bg-active;
328
341
  color: $sidebar-color-active;
329
342
  }
330
- > a > span:after {
343
+
344
+ >a>span:after {
331
345
  transform: rotate(-180deg);
332
346
  }
333
347
  }
348
+
334
349
  ul {
335
350
  display: none;
351
+
336
352
  li {
337
353
  a {
338
354
  margin-left: 30px;
339
355
  background-color: $sidebar-lvl2-bg;
340
356
  color: $sidebar-lvl2-color;
341
357
  }
358
+
342
359
  ul li a {
343
360
  margin-left: 60px;
344
361
  background-color: $sidebar-lvl3-bg;
@@ -401,7 +418,7 @@ header .navbar {
401
418
 
402
419
  /*-----General table properties-----*/
403
420
 
404
- .table > :not(:first-child) {
421
+ .table> :not(:first-child) {
405
422
  border-color: inherit;
406
423
  }
407
424
 
@@ -419,9 +436,11 @@ table {
419
436
  tr th:nth-child(1) {
420
437
  width: 25%;
421
438
  }
439
+
422
440
  tr th:nth-child(2) {
423
441
  width: 40%;
424
442
  }
443
+
425
444
  td:nth-child(2) {
426
445
  font-size: 0.9em;
427
446
  }
@@ -445,12 +464,12 @@ footer {
445
464
  color: $footer-color;
446
465
 
447
466
  a {
448
- color: $footer-link-color !important;
467
+ color: $footer-link-color !important;
449
468
  font-weight: bold;
450
469
  }
451
470
 
452
471
  a:hover {
453
- color: $footer-link-color-hover !important;
472
+ color: $footer-link-color-hover !important;
454
473
  }
455
474
 
456
475
  h2 {
@@ -467,6 +486,7 @@ footer {
467
486
  }
468
487
 
469
488
  /*-----Back to top-----*/
489
+
470
490
  #back-to-top {
471
491
  transition: 0.3s ease-in-out;
472
492
  position: fixed;
@@ -479,7 +499,7 @@ footer {
479
499
  &.visible {
480
500
  bottom: $spacer;
481
501
  opacity: 1;
482
- }
502
+ }
483
503
  }
484
504
 
485
505
  /*-----Contributors cards-----*/
@@ -488,16 +508,19 @@ footer {
488
508
  .card {
489
509
  background-color: $contr-card-bg;
490
510
  }
511
+
491
512
  .badge {
492
513
  background-color: $primary;
493
514
  margin: 10px 10px 0px 0px;
494
515
  }
516
+
495
517
  .card-affiliation {
496
518
  color: $primary;
497
519
  font-size: 0.8em;
498
520
  }
499
521
 
500
522
  }
523
+
501
524
  /*-----Contributors carousel-----*/
502
525
 
503
526
  #contributors-carousel .carousel-control-next,
@@ -509,10 +532,12 @@ footer {
509
532
  #contributors-carousel .card-title {
510
533
  font-size: 0.5em;
511
534
  }
535
+
512
536
  #contributors-carousel .card-affiliation {
513
537
  color: $primary;
514
538
  font-size: 0.4em;
515
539
  }
540
+
516
541
  #contributors-carousel .card-body {
517
542
  padding: 0rem 0.5rem 0.5rem 0.5rem;
518
543
  }
@@ -538,9 +563,12 @@ footer {
538
563
  /*--------Page contributors---------*/
539
564
  .page-contributors {
540
565
  background-color: $contr-bg;
541
- font-size: 0; /* Gets rid of extra white space */
566
+ font-size: 0;
567
+
568
+ /* Gets rid of extra white space */
542
569
  .contributor-link {
543
570
  background-color: $contr-link-bg;
571
+
544
572
  .contributor-img-sm {
545
573
  height: 1.7em;
546
574
  }
@@ -559,8 +587,14 @@ footer {
559
587
  }
560
588
  }
561
589
 
562
- .contributor-img {
563
- width: 11em;
590
+ .popover.contributor-cards {
591
+ .contributor-img {
592
+ width: 11em;
593
+ }
594
+
595
+ .card {
596
+ background-color: $contr-popover-bg;
597
+ }
564
598
  }
565
599
 
566
600
  /*-----Cookie consent banner-----*/
@@ -580,11 +614,11 @@ footer {
580
614
  transition: all 500ms ease-out;
581
615
 
582
616
  a {
583
- color: $footer-link-color !important;
617
+ color: $footer-link-color !important;
584
618
  }
585
619
 
586
620
  a:hover {
587
- color: $footer-link-color-hover !important;
621
+ color: $footer-link-color-hover !important;
588
622
  }
589
623
  }
590
624
 
@@ -599,15 +633,15 @@ footer {
599
633
 
600
634
  .hover-primary:hover,
601
635
  .hover-primary:focus {
602
- background-color: $btn-primary-bg-hover !important;
636
+ background-color: $btn-primary-bg-hover !important;
603
637
  transition: $btn-transition;
604
- color: $btn-primary-color-hover !important;
638
+ color: $btn-primary-color-hover !important;
605
639
  }
606
640
 
607
641
  .text-hover-primary:hover,
608
642
  .text-hover-primary:focus {
609
643
  transition: $btn-transition;
610
- color: $primary !important;
644
+ color: $primary !important;
611
645
  }
612
646
 
613
647
  /*-----Size components-----*/
@@ -624,8 +658,8 @@ li.past_event,
624
658
  display: none;
625
659
  }
626
660
 
627
- .events > ul > li,
628
- .news > ul > li {
661
+ .events>ul>li,
662
+ .news>ul>li {
629
663
  border-left: $news-border-color 5px solid;
630
664
  border-radius: $border-radius;
631
665
  padding: 0px 11px;
@@ -645,32 +679,37 @@ li.past_event,
645
679
  display: inline-block;
646
680
  }
647
681
 
648
- .full-description > *:last-child {
682
+ .full-description>*:last-child {
649
683
  margin-bottom: 0;
684
+
650
685
  li {
651
686
  margin-bottom: 0;
652
687
  }
653
688
  }
654
689
  }
690
+
655
691
  /*-----More information tiles-----*/
656
692
 
657
693
  .info-card {
658
694
  background-color: $info-card-bg;
695
+
659
696
  .card-header {
660
697
  background-color: $info-card-header-bg;
661
698
  color: $info-card-header-color;
662
699
  }
700
+
663
701
  a:hover {
664
702
  .text-muted {
665
703
  transition: $btn-transition;
666
- color: $white !important;
704
+ color: $white !important;
667
705
  }
668
706
 
669
707
  i {
670
708
  transition: $btn-transition;
671
- color: $white !important;
709
+ color: $white !important;
672
710
  }
673
711
  }
712
+
674
713
  img {
675
714
  height: 40px;
676
715
  max-width: 45px;
@@ -690,9 +729,11 @@ li.past_event,
690
729
  .navigation-tiles {
691
730
  .card {
692
731
  background-color: $nav-card-bg;
732
+
693
733
  .card-text {
694
734
  min-height: 4.5em;
695
735
  }
736
+
696
737
  .card-header {
697
738
  background-color: $nav-card-header-bg;
698
739
 
@@ -700,6 +741,7 @@ li.past_event,
700
741
  color: $nav-card-header-color;
701
742
  }
702
743
  }
744
+
703
745
  .badge {
704
746
  font-weight: inherit;
705
747
  background-color: $nav-card-badge-bg;
@@ -722,3 +764,4 @@ iframe.scale {
722
764
  }
723
765
 
724
766
  @import "custom_classes";
767
+
metadata CHANGED
@@ -1,14 +1,14 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: elixir-toolkit-theme
3
3
  version: !ruby/object:Gem::Version
4
- version: 1.15.2
4
+ version: 1.16.0
5
5
  platform: ruby
6
6
  authors:
7
7
  - bedroesb
8
8
  autorequire:
9
9
  bindir: bin
10
10
  cert_chain: []
11
- date: 2022-05-16 00:00:00.000000000 Z
11
+ date: 2022-05-27 00:00:00.000000000 Z
12
12
  dependencies:
13
13
  - !ruby/object:Gem::Dependency
14
14
  name: jekyll
@@ -93,6 +93,7 @@ files:
93
93
  - _sass/_bootstrap_variables.scss
94
94
  - _sass/_custom_classes.scss
95
95
  - _sass/_custom_variables.scss
96
+ - _sass/_variables.scss
96
97
  - _sass/bootstrap/_accordion.scss
97
98
  - _sass/bootstrap/_alert.scss
98
99
  - _sass/bootstrap/_badge.scss