dwc-archive 0.7.4 → 0.7.5

data/README.rdoc

@@ -59,6 +59,8 @@ Update to latest rubygems (v >= 1.3.6) which adds gemcutter sources by default.
 
     cn = DarwinCore::ClassificationNormalizer.new(dwc)
     cn.normalize
+    # if you don't want to generate path consisting of canonical forms of ancestors to a taxon
+    cn.normalize(:with_canonical_names => false)
 
     # to get a flat hash of nodes with attached vernacular names and synonyms
     normalized_data = cn.normalized_data

data/VERSION

@@ -1 +1 @@
-0.7.4
+0.7.5

data/lib/dwc-archive/classification_normalizer.rb

@@ -32,6 +32,7 @@ class DarwinCore
       @synonyms = {}
       @parser = ParsleyStore.new(1,2)
       @name_strings = {}
+      @vernacular_name_strings = {}
       @error_names = []
       @tree = {}
     end
@@ -40,6 +41,10 @@ class DarwinCore
       @name_strings[name_string] = 1 unless @name_strings[name_string]
     end
 
+    def add_vernacular_name_string(name_string)
+      @vernacular_name_strings[name_string] = 1 unless @vernacular_name_strings[name_string]
+    end
+
     def name_strings
       @name_strings.keys
     end
@@ -113,8 +118,6 @@ class DarwinCore
       !(authorship.empty? || row[fields[:scientificname]].index(authorship))
     end
 
-
-
     def ingest_core
       @normalized_data = {}
       raise RuntimeError, "Darwin Core core fields must contain taxon id and scientific name" unless (@core_fields[:id] && @core_fields[:scientificname])
@@ -258,7 +261,7 @@ class DarwinCore
             language,
             locality)
           @normalized_data[r[fields[:id]]].vernacular_names << vernacular
-          add_name_string(vernacular.name)
+          add_vernacular_name_string(vernacular.name)
         end
       end
     end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: dwc-archive
 version: !ruby/object:Gem::Version
-  version: 0.7.4
+  version: 0.7.5
   prerelease: 
 platform: ruby
 authors:
@@ -9,11 +9,11 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2011-11-28 00:00:00.000000000Z
+date: 2011-11-29 00:00:00.000000000Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: parsley-store
-  requirement: &70241095997220 !ruby/object:Gem::Requirement
+  requirement: &70123363707820 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -21,10 +21,10 @@ dependencies:
         version: 0.3.0
   type: :runtime
   prerelease: false
-  version_requirements: *70241095997220
+  version_requirements: *70123363707820
 - !ruby/object:Gem::Dependency
   name: rspec
-  requirement: &70241095996620 !ruby/object:Gem::Requirement
+  requirement: &70123363707200 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -32,10 +32,10 @@ dependencies:
         version: 2.3.0
   type: :development
   prerelease: false
-  version_requirements: *70241095996620
+  version_requirements: *70123363707200
 - !ruby/object:Gem::Dependency
   name: nokogiri
-  requirement: &70241095995420 !ruby/object:Gem::Requirement
+  requirement: &70123363706020 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -43,10 +43,10 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *70241095995420
+  version_requirements: *70123363706020
 - !ruby/object:Gem::Dependency
   name: cucumber
-  requirement: &70241095994720 !ruby/object:Gem::Requirement
+  requirement: &70123363705500 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -54,10 +54,10 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *70241095994720
+  version_requirements: *70123363705500
 - !ruby/object:Gem::Dependency
   name: bundler
-  requirement: &70241095993980 !ruby/object:Gem::Requirement
+  requirement: &70123363704840 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -65,10 +65,10 @@ dependencies:
         version: 1.0.0
   type: :development
   prerelease: false
-  version_requirements: *70241095993980
+  version_requirements: *70123363704840
 - !ruby/object:Gem::Dependency
   name: jeweler
-  requirement: &70241095993280 !ruby/object:Gem::Requirement
+  requirement: &70123363704160 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -76,10 +76,10 @@ dependencies:
         version: 1.6.4
   type: :development
   prerelease: false
-  version_requirements: *70241095993280
+  version_requirements: *70123363704160
 - !ruby/object:Gem::Dependency
   name: ruby-debug19
-  requirement: &70241095992540 !ruby/object:Gem::Requirement
+  requirement: &70123363703400 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -87,10 +87,10 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *70241095992540
+  version_requirements: *70123363703400
 - !ruby/object:Gem::Dependency
   name: parsley-store
-  requirement: &70241095991840 !ruby/object:Gem::Requirement
+  requirement: &70123363702720 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -98,10 +98,10 @@ dependencies:
         version: 0.3.0
   type: :runtime
   prerelease: false
-  version_requirements: *70241095991840
+  version_requirements: *70123363702720
 - !ruby/object:Gem::Dependency
   name: rspec
-  requirement: &70241095991100 !ruby/object:Gem::Requirement
+  requirement: &70123363701960 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -109,10 +109,10 @@ dependencies:
         version: 1.2.9
   type: :development
   prerelease: false
-  version_requirements: *70241095991100
+  version_requirements: *70123363701960
 - !ruby/object:Gem::Dependency
   name: cucumber
-  requirement: &70241095990400 !ruby/object:Gem::Requirement
+  requirement: &70123363701280 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -120,7 +120,7 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *70241095990400
+  version_requirements: *70123363701280
 description: Darwin Core Archive is the current standard exchange format for GLobal
   Names Architecture modules. This gem makes it easy to incorporate files in Darwin
   Core Archive format into a ruby project.