dtw 0.0.1

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+ # This configuration was generated by `rubocop --auto-gen-config`
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+ # on 2015-05-03 18:22:33 -0700 using RuboCop version 0.30.0.
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+ # The point is for the user to remove these configuration records
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+ # one by one as the offenses are removed from the code base.
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+ # Note that changes in the inspected code, or installation of new
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+ # versions of RuboCop, may require this file to be generated again.
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+
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+ # Offense count: 1
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+ # Cop supports --auto-correct.
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+ Lint/UnusedBlockArgument:
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+ Enabled: false
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+
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+ # Offense count: 68
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+ # Cop supports --auto-correct.
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+ Lint/UnusedMethodArgument:
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+ Enabled: false
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+
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+ # Offense count: 4
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+ Metrics/AbcSize:
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+ Max: 28
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+
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+ # Offense count: 47
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+ # Configuration parameters: AllowURI, URISchemes.
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+ Metrics/LineLength:
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+ Max: 171
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+
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+ # Offense count: 7
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+ # Cop supports --auto-correct.
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+ Style/ExtraSpacing:
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+ Enabled: false
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+
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+ # Offense count: 42
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+ # Cop supports --auto-correct.
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+ # Configuration parameters: EnforcedStyle, SupportedStyles.
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+ Style/StringLiterals:
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+ Enabled: false
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+ language: ruby
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+ rvm:
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+ - 2.2.1
data/Gemfile ADDED
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+ source 'https://rubygems.org'
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+
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+ # Specify your gem's dependencies in dtw.gemspec
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+ gemspec
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+ # Dtw
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+
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+ Welcome to your new gem! In this directory, you'll find the files you need to be able to package up your Ruby library into a gem. Put your Ruby code in the file `lib/dtw`. To experiment with that code, run `bin/console` for an interactive prompt.
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+
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+ TODO: Delete this and the text above, and describe your gem
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+
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+ ## Installation
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+
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+ Add this line to your application's Gemfile:
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+
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+ ```ruby
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+ gem 'dtw'
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+ ```
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+
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+ And then execute:
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+
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+ $ bundle
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+
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+ Or install it yourself as:
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+
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+ $ gem install dtw
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+
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+ ## Usage
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+
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+ TODO: Write usage instructions here
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+
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+ ## Development
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+
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+ After checking out the repo, run `bin/setup` to install dependencies. Then, run `bin/console` for an interactive prompt that will allow you to experiment.
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+
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+ To install this gem onto your local machine, run `bundle exec rake install`. To release a new version, update the version number in `version.rb`, and then run `bundle exec rake release` to create a git tag for the version, push git commits and tags, and push the `.gem` file to [rubygems.org](https://rubygems.org).
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+
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+ ## Contributing
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+
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+ 1. Fork it ( https://github.com/[my-github-username]/dtw/fork )
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+ 2. Create your feature branch (`git checkout -b my-new-feature`)
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+ 3. Commit your changes (`git commit -am 'Add some feature'`)
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+ 4. Push to the branch (`git push origin my-new-feature`)
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+ 5. Create a new Pull Request
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+ require "bundler/gem_tasks"
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+
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+ begin
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+ require 'rspec/core/rake_task'
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+ RSpec::Core::RakeTask.new(:spec)
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+ rescue LoadError
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+ end
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+
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+ task default: :spec
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+ #!/usr/bin/env ruby
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+
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+ require "bundler/setup"
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+ require "dtw"
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+
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+ # You can add fixtures and/or initialization code here to make experimenting
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+ # with your gem easier. You can also use a different console, if you like.
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+
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+ # (If you use this, don't forget to add pry to your Gemfile!)
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+ # require "pry"
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+ # Pry.start
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+
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+ require "irb"
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+ IRB.start
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+ #!/bin/bash
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+ set -euo pipefail
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+ IFS=$'\n\t'
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+
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+ bundle install
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+
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+ # Do any other automated setup that you need to do here
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+ # coding: utf-8
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+ lib = File.expand_path('../lib', __FILE__)
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+ $LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
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+ require 'dtw/version'
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+
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+ Gem::Specification.new do |spec|
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+ spec.name = "dtw"
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+ spec.version = Dtw::VERSION
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+ spec.authors = ["Chris Beer"]
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+ spec.email = ["chris@cbeer.info"]
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+
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+ spec.summary = %q{Dynamic time warping for ruby}
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+ spec.homepage = "https://github.com/cbeer/dtw"
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+
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+ spec.files = `git ls-files -z`.split("\x0").reject { |f| f.match(%r{^(test|spec|features)/}) }
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+ spec.bindir = "exe"
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+ spec.executables = spec.files.grep(%r{^exe/}) { |f| File.basename(f) }
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+ spec.require_paths = ["lib"]
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+
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+ spec.add_development_dependency 'bundler'
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+ spec.add_development_dependency 'rake'
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+ spec.add_development_dependency 'rspec', '~> 3.0'
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+ end
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+ require "dtw/version"
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+
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+ module Dtw
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+ require 'dtw/naive'
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+ end
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+ module Dtw
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+ class Naive
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+ attr_reader :series, :options
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+ def initialize(*series)
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+ @options = series.pop if series.last.is_a? Hash
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+ @series = series
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+ end
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+
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+ def path
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+ @path ||= begin
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+ path = []
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+
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+ i = series.first.length - 1
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+ j = series.last.length - 1
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+
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+ while i > 0 || j > 0
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+ path.unshift [i, j]
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+ i, j = matrix[:path][[i, j]]
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+ end
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+
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+ path.unshift [0, 0]
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+
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+ path
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+ end
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+ end
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+
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+ private
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+
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+ def matrix
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+ @matrix ||= begin
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+ g = { path: {} }
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+ warping_matrix(g, series.first.length - 1, series.last.length - 1)
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+ g
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+ end
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+ end
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+
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+ def warping_matrix(g, i, j)
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+ return g[[i, j]] if g[[i, j]]
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+ d = distance(i, j)
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+
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+ if i == 0 && j == 0
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+ g[:path][[i, j]] = [nil, nil]
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+ g[[i, j]] = d
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+ return d
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+ end
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+
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+ deletion = warping_matrix(g, i, j - 1) if j > 0
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+ match = warping_matrix(g, i - 1, j - 1) if i > 0 && j > 0
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+ insertion = warping_matrix(g, i - 1, j) if i > 0
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+
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+ m = [deletion, match, insertion].compact.min
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+
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+ g[:path][[i, j]] = if m == match
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+ [i - 1, j - 1]
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+ elsif m == deletion
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+ [i, j - 1]
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+ elsif m == insertion
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+ [i - 1, j]
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+ end
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+
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+ g[[i, j]] = m + d
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+ end
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+
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+ def distance(i, j)
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+ a, b = series.first[i], series.last[j]
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+ z = (a - b)**2
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+ z
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+ end
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+ end
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+ end
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+ module Dtw
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+ VERSION = "0.0.1"
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+ end
metadata ADDED
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+ --- !ruby/object:Gem::Specification
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+ name: dtw
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+ version: !ruby/object:Gem::Version
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+ version: 0.0.1
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+ platform: ruby
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+ authors:
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+ - Chris Beer
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+ autorequire:
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+ bindir: exe
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+ cert_chain: []
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+ date: 2015-05-13 00:00:00.000000000 Z
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+ dependencies:
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+ - !ruby/object:Gem::Dependency
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+ name: bundler
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+ requirement: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :development
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ - !ruby/object:Gem::Dependency
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+ name: rake
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+ requirement: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :development
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ - !ruby/object:Gem::Dependency
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+ name: rspec
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+ requirement: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - "~>"
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+ - !ruby/object:Gem::Version
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+ version: '3.0'
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+ type: :development
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - "~>"
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+ - !ruby/object:Gem::Version
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+ version: '3.0'
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+ description:
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+ email:
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+ - chris@cbeer.info
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+ executables: []
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+ extensions: []
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+ extra_rdoc_files: []
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+ files:
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+ - ".gitignore"
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+ - ".rspec"
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+ - ".rubocop.yml"
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+ - ".rubocop_hound.yml"
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+ - ".rubocop_todo.yml"
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+ - ".travis.yml"
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+ - Gemfile
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+ - README.md
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+ - Rakefile
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+ - bin/console
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+ - bin/setup
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+ - dtw.gemspec
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+ - lib/dtw.rb
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+ - lib/dtw/naive.rb
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+ - lib/dtw/version.rb
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+ homepage: https://github.com/cbeer/dtw
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+ licenses: []
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+ metadata: {}
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+ post_install_message:
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+ rdoc_options: []
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+ require_paths:
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+ - lib
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+ required_ruby_version: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ required_rubygems_version: !ruby/object:Gem::Requirement
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+ requirements:
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+ - - ">="
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ requirements: []
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+ rubyforge_project:
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+ rubygems_version: 2.4.5
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+ signing_key:
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+ specification_version: 4
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+ summary: Dynamic time warping for ruby
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+ test_files: []