dorothy2 1.2.0 → 2.0.0

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Files changed (47) hide show
  1. checksums.yaml +8 -8
  2. data/CHANGELOG +39 -14
  3. data/README.md +80 -62
  4. data/UPDATE +6 -14
  5. data/bin/dorothy2 +472 -0
  6. data/dorothy2.gemspec +22 -16
  7. data/etc/ddl/dorothive.ddl +619 -373
  8. data/etc/sources.yml.example +27 -2
  9. data/lib/doroGUI.rb +232 -0
  10. data/lib/doroParser.rb +34 -78
  11. data/lib/dorothy2.rb +288 -248
  12. data/lib/dorothy2/BFM.rb +114 -61
  13. data/lib/dorothy2/DEM.rb +3 -1
  14. data/lib/dorothy2/NAM.rb +2 -2
  15. data/lib/dorothy2/Settings.rb +2 -1
  16. data/lib/dorothy2/VSM.rb +2 -1
  17. data/lib/dorothy2/deep_symbolize.rb +2 -7
  18. data/lib/dorothy2/do-init.rb +286 -19
  19. data/lib/dorothy2/do-logger.rb +1 -1
  20. data/lib/dorothy2/do-utils.rb +382 -33
  21. data/lib/dorothy2/version.rb +1 -1
  22. data/lib/dorothy2/vtotal.rb +30 -20
  23. data/lib/mu/xtractr.rb +11 -11
  24. data/lib/mu/xtractr/stream.rb +1 -1
  25. data/lib/www/public/reset.css +153 -0
  26. data/lib/www/public/style.css +65 -0
  27. data/lib/www/views/analyses.erb +28 -0
  28. data/lib/www/views/email.erb +63 -0
  29. data/lib/www/views/flows.erb +30 -0
  30. data/lib/www/views/layout.erb +27 -0
  31. data/lib/www/views/profile.erb +49 -0
  32. data/lib/www/views/queue.erb +28 -0
  33. data/lib/www/views/resume.erb +135 -0
  34. data/lib/www/views/resume.erb~ +88 -0
  35. data/lib/www/views/samples.erb +20 -0
  36. data/lib/www/views/upload.erb +154 -0
  37. data/share/img/The_big_picture.pdf +0 -0
  38. data/test/tc_dorothy_full.rb +3 -0
  39. metadata +169 -70
  40. data/TODO +0 -27
  41. data/bin/dorothy_start +0 -225
  42. data/bin/dorothy_stop +0 -28
  43. data/bin/dparser_start +0 -94
  44. data/bin/dparser_stop +0 -31
  45. data/etc/dorothy copy.yml.example +0 -39
  46. data/etc/extensions.yml +0 -41
  47. data/share/update-dorothive.sql +0 -19
data/share/update-dorothive.sql DELETED
@@ -1,19 +0,0 @@
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- CREATE TABLE dorothy.sys_procs
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- (
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- analysis_id integer NOT NULL,
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- pid integer NOT NULL,
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- "name" character varying,
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- "owner" character varying,
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- "cmdLine" character varying,
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- "startTime" timestamp without time zone,
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- "endTime" timestamp without time zone,
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- "exitCode" integer,
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- CONSTRAINT "procs-pk" PRIMARY KEY (analysis_id, pid),
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- CONSTRAINT "anal_id-fk" FOREIGN KEY (analysis_id)
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- REFERENCES dorothy.analyses (id) MATCH SIMPLE
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- ON UPDATE NO ACTION ON DELETE NO ACTION
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- )
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- WITH (
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- OIDS=FALSE
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- );
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- ALTER TABLE dorothy.sys_procs OWNER TO postgres;