dorothy2 1.2.0 → 2.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (47) hide show
  1. checksums.yaml +8 -8
  2. data/CHANGELOG +39 -14
  3. data/README.md +80 -62
  4. data/UPDATE +6 -14
  5. data/bin/dorothy2 +472 -0
  6. data/dorothy2.gemspec +22 -16
  7. data/etc/ddl/dorothive.ddl +619 -373
  8. data/etc/sources.yml.example +27 -2
  9. data/lib/doroGUI.rb +232 -0
  10. data/lib/doroParser.rb +34 -78
  11. data/lib/dorothy2.rb +288 -248
  12. data/lib/dorothy2/BFM.rb +114 -61
  13. data/lib/dorothy2/DEM.rb +3 -1
  14. data/lib/dorothy2/NAM.rb +2 -2
  15. data/lib/dorothy2/Settings.rb +2 -1
  16. data/lib/dorothy2/VSM.rb +2 -1
  17. data/lib/dorothy2/deep_symbolize.rb +2 -7
  18. data/lib/dorothy2/do-init.rb +286 -19
  19. data/lib/dorothy2/do-logger.rb +1 -1
  20. data/lib/dorothy2/do-utils.rb +382 -33
  21. data/lib/dorothy2/version.rb +1 -1
  22. data/lib/dorothy2/vtotal.rb +30 -20
  23. data/lib/mu/xtractr.rb +11 -11
  24. data/lib/mu/xtractr/stream.rb +1 -1
  25. data/lib/www/public/reset.css +153 -0
  26. data/lib/www/public/style.css +65 -0
  27. data/lib/www/views/analyses.erb +28 -0
  28. data/lib/www/views/email.erb +63 -0
  29. data/lib/www/views/flows.erb +30 -0
  30. data/lib/www/views/layout.erb +27 -0
  31. data/lib/www/views/profile.erb +49 -0
  32. data/lib/www/views/queue.erb +28 -0
  33. data/lib/www/views/resume.erb +135 -0
  34. data/lib/www/views/resume.erb~ +88 -0
  35. data/lib/www/views/samples.erb +20 -0
  36. data/lib/www/views/upload.erb +154 -0
  37. data/share/img/The_big_picture.pdf +0 -0
  38. data/test/tc_dorothy_full.rb +3 -0
  39. metadata +169 -70
  40. data/TODO +0 -27
  41. data/bin/dorothy_start +0 -225
  42. data/bin/dorothy_stop +0 -28
  43. data/bin/dparser_start +0 -94
  44. data/bin/dparser_stop +0 -31
  45. data/etc/dorothy copy.yml.example +0 -39
  46. data/etc/extensions.yml +0 -41
  47. data/share/update-dorothive.sql +0 -19
data/share/update-dorothive.sql DELETED
@@ -1,19 +0,0 @@
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- CREATE TABLE dorothy.sys_procs
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- (
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- analysis_id integer NOT NULL,
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- pid integer NOT NULL,
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- "name" character varying,
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- "owner" character varying,
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- "cmdLine" character varying,
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- "startTime" timestamp without time zone,
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- "endTime" timestamp without time zone,
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- "exitCode" integer,
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- CONSTRAINT "procs-pk" PRIMARY KEY (analysis_id, pid),
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- CONSTRAINT "anal_id-fk" FOREIGN KEY (analysis_id)
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- REFERENCES dorothy.analyses (id) MATCH SIMPLE
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- ON UPDATE NO ACTION ON DELETE NO ACTION
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- )
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- WITH (
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- OIDS=FALSE
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- );
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- ALTER TABLE dorothy.sys_procs OWNER TO postgres;