dor-services 5.1.1 → 5.2.0

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Files changed (68) hide show
  1. checksums.yaml +8 -8
  2. data/lib/dor-services.rb +1 -2
  3. data/lib/dor/config.rb +5 -6
  4. data/lib/dor/datastreams/content_metadata_ds.rb +17 -20
  5. data/lib/dor/datastreams/datastream_spec_solrizer.rb +1 -1
  6. data/lib/dor/datastreams/desc_metadata_ds.rb +7 -7
  7. data/lib/dor/datastreams/embargo_metadata_ds.rb +2 -7
  8. data/lib/dor/datastreams/events_ds.rb +9 -9
  9. data/lib/dor/datastreams/identity_metadata_ds.rb +29 -34
  10. data/lib/dor/datastreams/rights_metadata_ds.rb +1 -1
  11. data/lib/dor/datastreams/role_metadata_ds.rb +0 -1
  12. data/lib/dor/datastreams/simple_dublin_core_ds.rb +12 -13
  13. data/lib/dor/datastreams/version_metadata_ds.rb +11 -15
  14. data/lib/dor/datastreams/workflow_definition_ds.rb +18 -22
  15. data/lib/dor/datastreams/workflow_ds.rb +24 -36
  16. data/lib/dor/migrations/identifiable/assert_adminPolicy.rb +1 -1
  17. data/lib/dor/migrations/identifiable/fix_model_assertions.rb +1 -1
  18. data/lib/dor/migrations/identifiable/record_remediation.rb +2 -2
  19. data/lib/dor/migrations/identifiable/uriify_augmented_contentlocation_refs.rb +1 -1
  20. data/lib/dor/migrations/identifiable/uriify_contentlocation_refs.rb +1 -1
  21. data/lib/dor/migrations/processable/unify_workflows.rb +4 -4
  22. data/lib/dor/migrations/versionable/add_missing_version_md.rb +2 -2
  23. data/lib/dor/models/assembleable.rb +2 -2
  24. data/lib/dor/models/collection.rb +1 -0
  25. data/lib/dor/models/contentable.rb +3 -3
  26. data/lib/dor/models/describable.rb +16 -13
  27. data/lib/dor/models/editable.rb +3 -3
  28. data/lib/dor/models/embargoable.rb +2 -2
  29. data/lib/dor/models/eventable.rb +2 -2
  30. data/lib/dor/models/geoable.rb +14 -18
  31. data/lib/dor/models/governable.rb +1 -1
  32. data/lib/dor/models/identifiable.rb +36 -57
  33. data/lib/dor/models/itemizable.rb +6 -6
  34. data/lib/dor/models/presentable.rb +12 -12
  35. data/lib/dor/models/preservable.rb +2 -5
  36. data/lib/dor/models/processable.rb +19 -25
  37. data/lib/dor/models/publishable.rb +2 -2
  38. data/lib/dor/models/releaseable.rb +165 -212
  39. data/lib/dor/models/shelvable.rb +10 -14
  40. data/lib/dor/models/upgradable.rb +11 -11
  41. data/lib/dor/models/versionable.rb +16 -21
  42. data/lib/dor/models/workflow_object.rb +3 -3
  43. data/lib/dor/services/cleanup_reset_service.rb +32 -27
  44. data/lib/dor/services/digital_stacks_service.rb +3 -3
  45. data/lib/dor/services/merge_service.rb +4 -8
  46. data/lib/dor/services/metadata_handlers/catalog_handler.rb +1 -1
  47. data/lib/dor/services/metadata_handlers/mdtoolkit_handler.rb +4 -6
  48. data/lib/dor/services/metadata_service.rb +20 -22
  49. data/lib/dor/services/registration_service.rb +6 -8
  50. data/lib/dor/services/reset_workspace_service.rb +14 -16
  51. data/lib/dor/services/sdr_ingest_service.rb +2 -6
  52. data/lib/dor/services/search_service.rb +3 -3
  53. data/lib/dor/services/suri_service.rb +2 -3
  54. data/lib/dor/services/technical_metadata_service.rb +2 -3
  55. data/lib/dor/utils/ng_tidy.rb +6 -6
  56. data/lib/dor/utils/predicate_patch.rb +1 -1
  57. data/lib/dor/utils/solr_doc_helper.rb +2 -2
  58. data/lib/dor/version.rb +1 -1
  59. data/lib/dor/workflow/document.rb +27 -33
  60. data/lib/dor/workflow/graph.rb +34 -37
  61. data/lib/dor/workflow/process.rb +8 -8
  62. data/lib/tasks/rdoc.rake +5 -5
  63. metadata +4 -11
  64. data/bin/dor-indexer +0 -108
  65. data/bin/dor-indexerd +0 -73
  66. data/config/certs/robots-dor-dev.crt +0 -29
  67. data/config/certs/robots-dor-dev.key +0 -27
  68. data/config/dev_console_env.rb +0 -78
@@ -23,8 +23,8 @@ module Workflow
23
23
  'batch_limit' => node['batch-limit'] ? node['batch-limit'].to_i : nil,
24
24
  'error_limit' => node['error-limit'] ? node['error-limit'].to_i : nil,
25
25
  'prerequisite' => node.xpath('prereq').collect { |p|
26
- repo = (p['repository'].nil? or p['repository'] == @repo) ? nil : p['repository']
27
- wf = (p['workflow'].nil? or p['workflow'] == @workflow) ? nil : p['workflow']
26
+ repo = (p['repository'].nil? || p['repository'] == @repo) ? nil : p['repository']
27
+ wf = (p['workflow'].nil? || p['workflow'] == @workflow) ? nil : p['workflow']
28
28
  [repo,wf,p.text.to_s].compact.join(':')
29
29
  },
30
30
  'priority' => node['priority'] ? node['priority'].to_i : 0
@@ -46,19 +46,19 @@ module Workflow
46
46
  def completed? ; self.status == 'completed' ; end
47
47
  def error? ; self.status == 'error' ; end
48
48
  def waiting? ; self.status == 'waiting' ; end
49
- def date_time ;@attrs['datetime'] ; end
49
+ def date_time ;@attrs['datetime'] ; end
50
50
 
51
51
  def archived?
52
- return true if(@attrs['archived'] =~ /true$/i)
52
+ return true if @attrs['archived'] =~ /true$/i
53
53
  return false
54
54
  end
55
55
 
56
56
  def ready?
57
- self.waiting? and (not self.prerequisite.nil?) and self.prerequisite.all? { |pr| (prq = self.owner[pr]) && prq.completed? }
57
+ self.waiting? && (!self.prerequisite.nil?) && self.prerequisite.all? { |pr| (prq = self.owner[pr]) && prq.completed? }
58
58
  end
59
59
 
60
60
  def blocked?
61
- self.waiting? and (not self.prerequisite.nil?) and self.prerequisite.any? { |pr| (prq = self.owner[pr]) && (prq.error? or prq.blocked?) }
61
+ self.waiting? && (!self.prerequisite.nil?) && self.prerequisite.any? { |pr| (prq = self.owner[pr]) && (prq.error? || prq.blocked?) }
62
62
  end
63
63
 
64
64
  def state
@@ -92,8 +92,8 @@ module Workflow
92
92
  end
93
93
 
94
94
  def to_hash
95
- @attrs.reject { |k,v| v.nil? or v == 0 or (v.respond_to?(:empty?) and v.empty?) }
95
+ @attrs.reject { |k,v| v.nil? || v == 0 || (v.respond_to?(:empty?) && v.empty?) }
96
96
  end
97
97
  end
98
98
  end
99
- end
99
+ end
data/lib/tasks/rdoc.rake CHANGED
@@ -10,11 +10,11 @@ namespace :doc do
10
10
  require 'yard/rake/yardoc_task'
11
11
 
12
12
  YARD::Rake::YardocTask.new(:generate) do |yt|
13
- yt.files = Dir.glob(File.join(project_root, 'lib', '*.rb')) +
14
- Dir.glob(File.join(project_root, 'lib', '**', '*.rb')) + ['-']
15
- [ File.join(project_root, 'README.md') ] +
16
- [ File.join(project_root, 'LICENSE') ]
17
-
13
+ yt.files = Dir.glob(File.join(project_root, 'lib', '*.rb')) +
14
+ Dir.glob(File.join(project_root, 'lib', '**', '*.rb')) + ['-'] +
15
+ [ File.join(project_root, 'README.md') ] +
16
+ [ File.join(project_root, 'LICENSE') ]
17
+
18
18
  yt.options = ['--output-dir', doc_destination, '--readme', 'README.md']
19
19
  end
20
20
  rescue LoadError
metadata CHANGED
@@ -1,7 +1,7 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: dor-services
3
3
  version: !ruby/object:Gem::Version
4
- version: 5.1.1
4
+ version: 5.2.0
5
5
  platform: ruby
6
6
  authors:
7
7
  - Michael Klein
@@ -12,7 +12,7 @@ authors:
12
12
  autorequire:
13
13
  bindir: bin
14
14
  cert_chain: []
15
- date: 2015-07-27 00:00:00.000000000 Z
15
+ date: 2015-09-05 00:00:00.000000000 Z
16
16
  dependencies:
17
17
  - !ruby/object:Gem::Dependency
18
18
  name: active-fedora
@@ -559,19 +559,12 @@ dependencies:
559
559
  description: Contains classes to register objects and initialize workflows
560
560
  email:
561
561
  - mbklein@stanford.edu
562
- executables:
563
- - dor-indexer
564
- - dor-indexerd
562
+ executables: []
565
563
  extensions: []
566
564
  extra_rdoc_files: []
567
565
  files:
568
- - bin/dor-indexer
569
- - bin/dor-indexerd
570
566
  - config/certs/README
571
- - config/certs/robots-dor-dev.crt
572
- - config/certs/robots-dor-dev.key
573
567
  - config/config_defaults.yml
574
- - config/dev_console_env.rb
575
568
  - config/dev_console_env.rb.example
576
569
  - config/predicate_mappings.yml
577
570
  - lib/dor-services.rb
@@ -672,7 +665,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
672
665
  version: 1.3.6
673
666
  requirements: []
674
667
  rubyforge_project:
675
- rubygems_version: 2.2.2
668
+ rubygems_version: 2.4.8
676
669
  signing_key:
677
670
  specification_version: 4
678
671
  summary: Ruby implmentation of DOR services used by the SULAIR Digital Library
data/bin/dor-indexer DELETED
@@ -1,108 +0,0 @@
1
- #!/usr/bin/env ruby
2
-
3
- require 'rubygems'
4
- require 'optparse'
5
- require 'stomp'
6
- require 'timeout'
7
- require 'dor-services'
8
-
9
- options = { :log_level => Logger::WARN }
10
-
11
- optparse = OptionParser.new do|opts|
12
- opts.banner = "Usage: #{File.basename(__FILE__)} [options]"
13
-
14
- options[:dor_config] = nil
15
- opts.on( '--dor-config PATH', 'Load the dor-services configuration file at this path' ) do |path|
16
- puts "Configuring dor-services..."
17
- options[:dor_config] = path
18
- require options[:dor_config]
19
- end
20
-
21
- options[:destination] = '/topic/fedora.apim.update'
22
- opts.on('-d','--destination TOPIC', 'Topic to listen to') do |destination|
23
- options[:destination] = destination
24
- end
25
-
26
- options[:client_id] = "fedora_stomper"
27
- opts.on('-c', '--client-id ID', 'Stomp client ID') do |client_id|
28
- Dor::Config.stomp.client_id = client_id
29
- end
30
-
31
- opts.on('-v', 'Verbose') do
32
- options[:log_level] -= 1 if options[:log_level] > 0
33
- end
34
-
35
- opts.on('-h', '--help', 'Display this screen') do
36
- puts opts
37
- exit
38
- end
39
- end
40
-
41
- optparse.parse!
42
-
43
- begin; require 'rubygems'; rescue; end
44
-
45
- unless options[:dor_config]
46
- $stderr.puts "The --dor-config PATH option is mandatory. Please provide the path to a valid dor-services configuration file."
47
- exit 1
48
- end
49
-
50
- puts "loading listener"
51
-
52
- begin
53
- @clientid = options[:client_id]
54
- @destination = options[:destination]
55
-
56
-
57
- @conn = Dor::Config.stomp.connection
58
- $stderr.print Time.now.to_s + " Getting output from #{@destination}\n"
59
-
60
- @conn.subscribe(@destination, {"activemq.subscriptionName" => @clientid, :ack =>"client" })
61
- while true
62
-
63
- begin
64
- Timeout::timeout(300) do
65
- @msg = @conn.receive
66
- end
67
- if @msg.nil?
68
- $stderr.print 'nil message\n'
69
- else
70
- pid = @msg.headers["pid"]
71
- method = @msg.headers["methodName"]
72
-
73
- if ["addDatastream", "addRelationship","ingest","modifyDatastreamByValue","modifyDatastreamByReference","modifyObject","purgeDatastream","purgeRelationship","reindex"].include? method
74
- begin
75
- obj = Dor.load_instance pid
76
- Dor::SearchService.solr.add(obj.to_solr, :add_attributes => {:commitWithin => 10}) unless obj.nil?
77
- rescue
78
- end
79
- elsif method == "purgeObject"
80
- Dor::SearchService.solr.delete_by_id(pid)
81
- else
82
- $stderr.print Time.now.to_s + " Unknown Method: #{method} for PID #{pid}"
83
- end
84
- $stderr.print Time.now.to_s + " updated solr index for #{pid}\n"
85
- @conn.ack @msg.headers["message-id"]
86
- end
87
- rescue Timeout::Error
88
- begin
89
- $stderr.print Time.now.to_s +" Sending heartbeat\n"
90
- @conn.begin('heartbeat')
91
- @conn.commit('heartbeat')
92
- rescue Exception => e
93
- body = "Unable to send heartbeat to broker\n"
94
- body << "\n\nExeption:\n" << he.inspect << "\n" << he.backtrace.join("\n")
95
- $stderr.print(Time.now.to_s + " Unable to send heartbeat")
96
- $stderr.print(body)
97
- end
98
-
99
-
100
- rescue Exception => e
101
- $stderr.print Time.now.to_s + " failed to update solr index for #{pid}: #<#{e.class.name}: #{e.message}>"
102
- end
103
- end
104
- @conn.join
105
- rescue Exception => e
106
- p e
107
- end
108
-
data/bin/dor-indexerd DELETED
@@ -1,73 +0,0 @@
1
- #!/usr/bin/env ruby
2
-
3
- require 'rubygems'
4
- require 'daemons'
5
- require 'stomp'
6
-
7
- banner=<<-EOC
8
- Usage: #{File.basename(__FILE__)} command --dor-config PATH [options]
9
- PATH must point to a valid dor-services configuration file
10
- Commands:
11
- start start an instance of the application
12
- stop stop all instances of the application
13
- restart stop all instances and restart them afterwards
14
- status show status (PID) of application instances
15
- Options:
16
- --dor-config PATH Load the dor-services configuration file at this path
17
- -d, --destination TOPIC Topic to listen to (default: /topic/fedora.apim.update)
18
- -c, --client-id Stomp client ID (default: fedora_stomper)
19
- -h, --help Display this screen
20
- EOC
21
-
22
-
23
- # check for a valid command
24
- unless ['start','stop','restart','status'].include? ARGV[0]
25
- puts banner
26
- exit 7
27
- end
28
-
29
- if ARGV.include?('-h') || ARGV.include?('--help')
30
- puts banner
31
- exit 0
32
- end
33
-
34
- # Make sure --dor-config was set for the start and restart commands
35
- if ARGV[0] == 'start' || ARGV[0] == 'restart'
36
- unless ARGV[1] == '--dor-config'
37
- puts "ERROR: You must --dor-config to specify the path to a valid dor-services gem configuration file"
38
- exit 8
39
- end
40
- end
41
- #4th arg should be --log_dir and 5th is the path.
42
- log_dir=nil
43
- if ARGV[3]=='--log_dir'
44
- log_dir=ARGV[4]
45
- else
46
- puts "Log dir not specified"
47
- end
48
-
49
-
50
- if log_dir.empty?
51
- File.join(Dir.pwd,'log')
52
- end
53
-
54
-
55
- options = {
56
- :multiple=>ARGV.any? { |arg| arg =~ %r{^/queue/}},
57
- :dir_mode=>:normal,
58
- :dir=>'/tmp',
59
- :log_dir=> log_dir,
60
- :log_output=>true,
61
- :backtrace=>true
62
- }
63
- argv_array = []
64
- argv_array << ARGV[0]
65
- argv_array << '--'
66
- ARGV[1..-1].each {|ele| argv_array << ele }
67
- options[:ARGV] = argv_array
68
-
69
- version = '>=0'
70
- #app = Gem.bin_path('dor-services','dor-indexer',version)
71
- app = File.expand_path('../dor-indexer',__FILE__)
72
- Daemons.run(app,options)
73
-
@@ -1,29 +0,0 @@
1
- -----BEGIN CERTIFICATE-----
2
- MIIE9zCCAt8CCQCcUJVDTu7rTjANBgkqhkiG9w0BAQUFADCBvzELMAkGA1UEBhMC
3
- VVMxEzARBgNVBAgTCkNhbGlmb3JuaWExETAPBgNVBAcTCFN0YW5mb3JkMRwwGgYD
4
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- qgMyv51Qx82o0IJ1On1rNg5/iB7OEVcYSol3U5xiY9gRUd3vq637agZzMuRQnKXs
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- Uj0+Vl4OrZ54F8MVsUKfi7Je1oVUEhuHqFt/tSOGlHg1XyR/ExwulCNBKIVdhhrF
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28
- 4gY8Go40mS83xHCKBooqsy2/Z9vQlSb9Cr8u
29
- -----END CERTIFICATE-----
@@ -1,27 +0,0 @@
1
- -----BEGIN RSA PRIVATE KEY-----
2
- MIIEpQIBAAKCAQEAtbfjz4S0wxUAbgH+H9Rjo+4x3VzDdLb0hy9Tgmom3tHfIim1
3
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- uts1iUBVaY0lvAa5f3wMo3mb1iTMgg10arHnYwIDAQABAoIBAQCmlDzsZZ2C24S6
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- U29OZFc21kq1vqyaGIEOT48BFSguyDsAyTWKH0IsRC41suRxCGTQn7KeegLh5zjO
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- UAGK4uCYm6g7mOs4n5fpHUHWVuRFJG2dX1vbQTBVO1fHCJSX2ygumHhN+w0ibT/r
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- v2+F2ObuOGWghM62tkylQNfsRD0QjalE8ST2xp9p4xwPrAwEuURlA04qnLYNi4+6
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- qexDtrLG8E6JV/dd3dY95WjKPscadR1fAKm9sebD0XO31Lu6BGCvpmBU0OmYVfrY
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- BN/ofhEmJh+Xgwfxx6PicRDvu9bPnffqbGhDO4ckGDlqXp1fDBgf1I7CclXdrVMH
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- Qsxunh5pAoGBAN7929V1aw0S7Rqvuf4N+o1XwBExa2DL7EYI1Oea/nuBMPqvfeNh
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- SrbM0gYejEzLmeRUUKRhMMoAgXQnxcg3Kz/5pUXT3b4YtzeskX8nkJ6/2gEU3M7E
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- lJj7c5wW1otqMH19+iDNR4N8vjPh98kDJW1HZUHSAcdyE+dZiFP2ofMfAoGBANCe
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- AJgA9EkdwZsom+I7Ty9LSrTWx6cKmNEbLVn1iSlyJx1kHoWyTMtuZszCWBjiXx70
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- 84WpX2B4MuJBq6sSoEiUahNsphks82glOd6i+eoE/I+NtZehOFnkAMyGux+FbMyG
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- q/9ZlQgsbWpFHxS59vX/kvlNun2RpJkaF6QPBuc9AoGBAIGdscCb5cPNsoCGkGf6
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- HB84WG4l+bJkFkyHKaoOT8neSGgOxe/7R4CGAbaI3yhsWGF+GPnTfJaOQLERxUch
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- ukQPil/STNwIZcc4ycHNb6S3A7MJO2f8oBtkXcjnBYI4EUOAjHmwmNb3FV/3Ax6W
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- c5TXoSXnOh2CU8twIWwcufolAoGATqnFf4uckZVu05rUbNIAYcz6NoZmck5EoVSm
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- HS3Asqggp6yA9djtrCfNC5icr4VsaLfku5nKJQ4t4bLxkGhNmBCejwSA/S09+x9O
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- Wu0JX3zR3y+IMczQ+tRGmNiU5qXhCJ4fbQHSeGqIN3Io7h/RR6E/QlJU59RrRG/a
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- SjqAV+ECgYEA2mA5VFK3jECnLde+biEaXidIOuBMcqaP0VG6sBwz2wTGSTBE1WkG
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- 6prCD0McWVAgDTm3MMKxeuMaoW5eEi83+G+CywLaTBpc8Hz7qgRhBpKhRirCfHMW
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- EfQV5k32vEGoSI+eG8zcGb9mwDeb/EWXAMGXrx2YuYFu7txtwC2mZXc=
27
- -----END RSA PRIVATE KEY-----
@@ -1,78 +0,0 @@
1
- cert_dir = File.join(File.dirname(__FILE__), "certs")
2
-
3
- Dor::Config.configure do
4
-
5
- ssl do
6
- cert_file File.join(cert_dir,"robots-dor-dev.crt")
7
- key_file File.join(cert_dir,"robots-dor-dev.key")
8
- key_pass ''
9
- end
10
-
11
- suri do
12
- mint_ids true
13
- id_namespace 'druid'
14
- url 'https://lyberservices-dev.stanford.edu'
15
- user 'labware'
16
- pass 'lyberteam'
17
- end
18
-
19
- metadata do
20
- exist.url 'http://viewer:l3l%40nd@lyberapps-dev.stanford.edu/exist/rest/'
21
- catalog.url 'http://lyberservices-prod.stanford.edu/catalog/mods'
22
- end
23
-
24
- stacks do
25
- document_cache_host 'purl-dev.stanford.edu'
26
- local_stacks_root '/stacks'
27
- local_document_cache_root '/purl/document_cache'
28
- local_workspace_root '/dor/workspace'
29
- end
30
-
31
- solrizer.url 'http://sul-solr.stanford.edu/solr/argo_test'
32
- fedora.url 'https://sul-dor-test.stanford.edu/fedora'
33
- workflow.url 'https://lyberservices-dev.stanford.edu/workflow/'
34
- dor_services.url 'https://dorAdmin:dorAdmin@sul-lyberservices-dev.stanford.edu/dor'
35
-
36
- cleanup do
37
- local_workspace_root '/dor/workspace'
38
- local_export_home '/dor/export'
39
- end
40
-
41
- sdr do
42
- url 'https://sdrAdmin:sdrAdmin@sdr-services-test.stanford.edu/sdr/'
43
- local_workspace_root '/dor/workspace'
44
- local_export_home '/dor/export'
45
- datastreams do
46
- administrativeMetadata 'optional'
47
- contentMetadata 'optional'
48
- descMetadata 'required'
49
- defaultObjectRights 'optional'
50
- events 'optional'
51
- embargoMetadata 'optional'
52
- identityMetadata 'required'
53
- provenanceMetadata 'required'
54
- relationshipMetadata 'required'
55
- rightsMetadata 'optional'
56
- roleMetadata 'optional'
57
- sourceMetadata 'optional'
58
- technicalMetadata 'optional'
59
- versionMetadata 'required'
60
- workflows 'optional'
61
- end
62
- end
63
-
64
- accessioning_robot_sleep_time 30
65
-
66
- end
67
-
68
-
69
- #WORKFLOW_URI = 'http://lyberservices-test.stanford.edu/workflow'
70
-
71
- # Constants for Dor::WorkflowService
72
- #module Dor
73
- # CREATE_WORKFLOW = DOR_CREATE_WORKFLOW = true
74
- # WF_URI = 'http://lyberservices-test.stanford.edu/workflow'
75
- #end
76
-
77
- # External application locations
78
- JHOVE_HOME = File.join(ENV['HOME'], 'jhoveToolkit')