documentrix 0.0.0

data/lib/documentrix/documents.rb

@@ -0,0 +1,328 @@
+require 'numo/narray'
+require 'digest'
+require 'kramdown/ansi'
+
+class Documentrix::Documents
+end
+module Documentrix::Documents::Cache
+end
+require 'documentrix/documents/cache/records'
+require 'documentrix/documents/cache/memory_cache'
+require 'documentrix/documents/cache/redis_cache'
+require 'documentrix/documents/cache/redis_backed_memory_cache'
+require 'documentrix/documents/cache/sqlite_cache'
+module Documentrix::Documents::Splitters
+end
+require 'documentrix/documents/splitters/character'
+require 'documentrix/documents/splitters/semantic'
+
+class Documentrix::Documents
+  include Kramdown::ANSI::Width
+  include Documentrix::Documents::Cache
+
+  Record = Class.new Documentrix::Documents::Cache::Records::Record
+
+  # The initialize method sets up the Documentrix::Documents instance by
+  # configuring its components.
+  #
+  # @param ollama [ Ollama::Client ] the client used for embedding
+  # @param model [ String ] the name of the model to use for embeddings
+  # @param model_options [ Hash ] optional parameters for the model
+  # @param collection [ Symbol ] the default collection to use (defaults to :default)
+  # @param embedding_length [ Integer ] the length of the embeddings (defaults to 1024)
+  # @param cache [ Documentrix::Cache ] the cache to use for storing documents (defaults to MemoryCache)
+  # @param database_filename [ String ] the filename of the SQLite database to use (defaults to ':memory:')
+  # @param redis_url [ String ] the URL of the Redis server to use (defaults to nil)
+  # @param debug [ FalseClass, TrueClass ] whether to enable debugging mode (defaults to false)
+  def initialize(ollama:, model:, model_options: nil, collection: nil, embedding_length: 1_024, cache: MemoryCache, database_filename: nil, redis_url: nil, debug: false)
+    collection ||= default_collection
+    @ollama, @model, @model_options, @collection, @debug =
+      ollama, model, model_options, collection.to_sym, debug
+    database_filename ||= ':memory:'
+    @cache = connect_cache(cache, redis_url, embedding_length, database_filename)
+  end
+
+  # The default_collection method returns the default collection name.
+  #
+  # @return [:default] The default collection name.
+  def default_collection
+    :default
+  end
+
+  attr_reader :ollama, :model, :collection, :cache
+
+  # The collection= method sets the new collection for this documents instance.
+  #
+  # @param new_collection [ Symbol ] the name of the new collection
+  def collection=(new_collection)
+    @collection   = new_collection.to_sym
+    @cache.prefix = prefix
+  end
+
+  # The prepare_texts method filters out existing texts from the input array
+  # and returns the filtered array.
+  #
+  # @param texts [ Array ] an array of text strings or #read objects.
+  #
+  # @return [ Array ] the filtered array of text strings
+  private def prepare_texts(texts)
+    texts = Array(texts).map! { |i| i.respond_to?(:read) ? i.read : i.to_s }
+    texts.reject! { |i| exist?(i) }
+    texts.empty? and return
+    if @debug
+      puts Documentrix::Utils::ColorizeTexts.new(texts)
+    end
+    texts
+  end
+
+
+  # The  method adds new texts `texts` to the documents collection by
+  # processing them through various stages. It first filters out existing texts
+  # from the input array using the `prepare_texts` method, then fetches
+  # embeddings for each text using the specified model and options. The fetched
+  # embeddings are used to create a new record in the cache, which is
+  # associated with the original text and tags (if any). The method processes
+  # the texts in batches of size , displaying progress information
+  # in the console. It also accepts an optional  string to associate
+  # with the added texts and an array of  to attach to each record. Once
+  # all texts have been processed, it returns the `Documentrix::Documents`
+  # instance itself, allowing for method chaining.
+  #
+  # @param texts [Array] an array of input texts
+  # @param batch_size [Integer] the number of texts to process in one batch
+  # @param source [String] the source URL for the added texts
+  # @param tags [Array] an array of tags associated with the added texts
+  #
+  # @example
+  #   documents.add(%w[ foo bar ], batch_size: 23, source: 'https://example.com', tags: %w[tag1 tag2])
+  #
+  # @return [Documentrix::Documents] self
+  def add(texts, batch_size: nil, source: nil, tags: [])
+    texts = prepare_texts(texts) or return self
+    tags = Documentrix::Utils::Tags.new(tags, source:)
+    if source
+      tags.add(File.basename(source).gsub(/\?.*/, ''), source:)
+    end
+    batches = texts.each_slice(batch_size || 10).
+      with_infobar(
+        label: "Add #{truncate(tags.to_s(link: false), percentage: 25)}",
+        total: texts.size
+      )
+    batches.each do |batch|
+      embeddings = fetch_embeddings(model:, options: @model_options, input: batch)
+      batch.zip(embeddings) do |text, embedding|
+        norm       = @cache.norm(embedding)
+        self[text] = Record[text:, embedding:, norm:, source:, tags: tags.to_a]
+      end
+      infobar.progress by: batch.size
+    end
+    infobar.newline
+    self
+  end
+  alias << add
+
+  # The [] method retrieves the value associated with the given text  from the
+  # cache.
+  #
+  # @param text [String] the text for which to retrieve the cached value
+  #
+  # @return [Object] the cached value, or nil if not found
+  def [](text)
+    @cache[key(text)]
+  end
+
+  # The []= method sets the value for a given text in the cache.
+  #
+  # @param text [ String ] the text to set
+  # @param record [ Hash ] the value to store
+  def []=(text, record)
+    @cache[key(text)] = record
+  end
+
+  # The exist? method checks if the given text exists in the cache.
+  #
+  # @param text [ String ] the text to check for existence
+  #
+  # @return [ FalseClass, TrueClass ] true if the text exists, false otherwise.
+  def exist?(text)
+    @cache.key?(key(text))
+  end
+
+  # The delete method removes the specified text from the cache by calling the
+  # delete method on the underlying cache object.
+  #
+  # @param text [ String ] the text for which to remove the value
+  #
+  # @return [ FalseClass, TrueClass ] true if the text was removed, false
+  #         otherwise.
+  def delete(text)
+    @cache.delete(key(text))
+  end
+
+  # The size method returns the number of texts stored in the cache of this
+  # Documentrix::Documents instance.
+  #
+  # @return [ Integer ] The total count of cached texts.
+  def size
+    @cache.size
+  end
+
+  # The clear method clears all texts from the cache or tags was given the ones
+  # tagged with the .
+  #
+  # @param tags [ NilClass, Array<String> ] the tag name to filter by
+  #
+  # @return [ Documentrix::Documents ] self
+  def clear(tags: nil)
+    @cache.clear(tags:)
+    self
+  end
+
+  # The find method searches for strings within the cache by computing their
+  # similarity scores.
+  #
+  # @param string [String] the input string
+  # @param tags [Array<String>] an array of tags to filter results by (optional)
+  # @param prompt [String] a prompt to use when searching for similar strings (optional)
+  # @param max_records [Integer] the maximum number of records to return (optional)
+  #
+  # @example
+  #   documents.find("foo")
+  #
+  # @return [Array<Documentrix::Documents::Record>]
+  def find(string, tags: nil, prompt: nil, max_records: nil)
+    needle = convert_to_vector(string, prompt:)
+    @cache.find_records(needle, tags:, max_records: nil)
+  end
+
+  # The  method filters the records returned by find based on text
+  # size and count.
+  #
+  # @param string [String] the search query
+  # @param text_size [Integer] the maximum allowed text size to return
+  # @param text_count [Integer] the maximum number of texts to return
+  #
+  # @example
+  #   documents.find_where('foo', text_size: 3, text_count: 1)
+  # @return [Array<Documentrix::Documents::Record>] the filtered records
+  def find_where(string, text_size: nil, text_count: nil, **opts)
+    if text_count
+      opts[:max_records] =  text_count
+    end
+    records = find(string, **opts)
+    size, count = 0, 0
+    records.take_while do |record|
+      if text_size and (size += record.text.size) > text_size
+        next false
+      end
+      if text_count and (count += 1) > text_count
+        next false
+      end
+      true
+    end
+  end
+
+  # The collections method returns an array of unique collection names
+  #
+  # @return [Array] An array of unique collection names
+  def collections
+    ([ default_collection ] + @cache.collections('%s-' % class_prefix)).uniq
+  end
+
+  # The tags method returns an array of unique tags from the cache.
+  #
+  # @return [Documentrix::Utils::Tags] A set of unique tags
+  def tags
+    @cache.tags
+  end
+
+  private
+
+  # The connect_cache method initializes and returns an instance of the
+  # specified cache class.
+  #
+  # @param cache_class [Class] the class of the cache to be instantiated
+  # @param redis_url [String] the URL of the Redis server
+  # @param embedding_length [Integer] the length of the embeddings used in the cache
+  # @param database_filename [String] the filename of the SQLite database file
+  #
+  # @return [CacheInstance] an instance of the specified cache class
+  def connect_cache(cache_class, redis_url, embedding_length, database_filename)
+    cache = nil
+    if (cache_class.instance_method(:redis) rescue nil)
+      begin
+        cache = cache_class.new(prefix:, url: redis_url, object_class: Record)
+        cache.size
+      rescue Redis::CannotConnectError
+        STDERR.puts(
+          "Cannot connect to redis URL #{redis_url.inspect}, "\
+          "falling back to MemoryCache."
+        )
+      end
+    elsif cache_class == SQLiteCache
+      cache = cache_class.new(
+        prefix:,
+        embedding_length:,
+        filename: database_filename,
+        debug: @debug
+      )
+    end
+  ensure
+    cache ||= MemoryCache.new(prefix:,)
+    cache.respond_to?(:find_records) or cache.extend(Records::FindRecords)
+    cache.extend(Records::Tags)
+    if cache.respond_to?(:redis)
+      cache.extend(Records::RedisFullEach)
+    end
+    return cache
+  end
+
+  # The convert_to_vector method converts the input into a vector by fetching
+  # embeddings from the model and then converting it using the cache's
+  # convert_to_vector method.
+  #
+  # @param input [String] the string to be converted
+  # @param prompt [String, nil] an optional prompt to be used in the conversion process
+  #
+  # @return [Array] the converted vector
+  def convert_to_vector(input, prompt: nil)
+    if prompt
+      input = prompt % input
+    end
+    input.is_a?(String) and input = fetch_embeddings(model:, input:).first
+    @cache.convert_to_vector(input)
+  end
+
+  # The fetch_embeddings method retrieves the embeddings for a given input
+  # using the specified model and options.
+  #
+  # @param model [ String ] the name of the model used for embedding
+  # @param input [ Array<String> ] the text(s) to be embedded
+  # @param options [ Hash ] optional parameters for the embedding process
+  #
+  # @return [ Array<Array<Float>> ] an array containing the embeddings for each input string
+  def fetch_embeddings(model:, input:, options: nil)
+    @ollama.embed(model:, input:, options:).embeddings
+  end
+
+  def class_prefix
+    'Documents'
+  end
+
+  # The prefix method returns a string that is used as the prefix for keys in
+  # the cache of the currently configured collection.
+  #
+  # @return [ String ] The prefix string
+  def prefix
+    '%s-%s-' % [ class_prefix, @collection ]
+  end
+
+  # The key method generates a SHA256 hash for the given input string.
+  #
+  # @param input [String] the input string to be hashed
+  #
+  # @return [String] the SHA256 hash of the input string
+  def key(input)
+    Digest::SHA256.hexdigest(input)
+  end
+end

data/lib/documentrix/utils/colorize_texts.rb

@@ -0,0 +1,65 @@
+require 'term/ansicolor'
+require 'kramdown/ansi'
+
+class Documentrix::Utils::ColorizeTexts
+  include Math
+  include Term::ANSIColor
+  include Kramdown::ANSI::Width
+
+  # Initializes a new instance of Documentrix::::ColorizeTexts
+  #
+  # @param [Array<String>] texts the array of strings to be displayed with colors
+  #
+  # @return [Documentrix::::ColorizeTexts] an instance of Documentrix::::ColorizeTexts
+  def initialize(*texts)
+    texts  = texts.map(&:to_a)
+    @texts = Array(texts.flatten)
+  end
+
+  # Returns a string representation of the object, including all texts content,
+  # colored differently and their sizes.
+  #
+  # @return [String] The formatted string.
+  def to_s
+    result = +''
+    @texts.each_with_index do |t, i|
+      color = colors[(t.hash ^ i.hash) % colors.size]
+      wrap(t, percentage: 90).each_line { |l|
+        result << on_color(color) { color(text_color(color)) { l } }
+      }
+      result << "\n##{bold{t.size.to_s}} \n\n"
+    end
+    result
+  end
+
+  private
+
+  # Returns the nearest RGB color to the given ANSI color
+  #
+  # @param [color] color The ANSI color attribute
+  #
+  # @return [Array<RGBTriple>] An array containing two RGB colors, one for black and
+  #   one for white text, where the first is the closest match to the input color
+  #   when printed on a black background, and the second is the closest match
+  #   when printed on a white background.
+  def text_color(color)
+    color = Term::ANSIColor::Attribute[color]
+    [
+      Attribute.nearest_rgb_color('#000'),
+      Attribute.nearest_rgb_color('#fff'),
+    ].max_by { |t| t.distance_to(color) }
+  end
+
+  # Returns an array of colors for each step in the gradient
+  #
+  # @return [Array<Array<Integer>>] An array of RGB color arrays
+  def colors
+    @colors ||= (0..255).map { |i|
+      [
+        128 + 128 * sin(PI * i / 32.0),
+        128 + 128 * sin(PI * i / 64.0),
+        128 + 128 * sin(PI * i / 128.0),
+      ].map { _1.clamp(0, 255).round }
+    }
+  end
+end

data/lib/documentrix/utils/math.rb

@@ -0,0 +1,48 @@
+module Documentrix::Utils::Math
+  # Returns the cosine similarity between two vectors `a` and `b`, 1.0 is
+  # exactly the same, 0.0 means decorrelated.
+  #
+  # @param [Vector] a The first vector
+  # @param [Vector] b The second vector
+  # @option a_norm [Float] a The Euclidean norm of vector a (default: calculated from a)
+  # @option b_norm [Float] b The Euclidean norm of vector b (default: calculated from b)
+  #
+  # @return [Float] The cosine similarity between the two vectors
+  #
+  # @example Calculate the cosine similarity between two vectors
+  #   cosine_similarity(a: [1, 2], b: [3, 4])
+  #
+  # @see #convert_to_vector
+  # @see #norm
+  def cosine_similarity(a:, b:, a_norm: norm(a), b_norm: norm(b))
+    a, b = convert_to_vector(a), convert_to_vector(b)
+    a.dot(b) / (a_norm * b_norm)
+  end
+
+  # Returns the Euclidean norm (magnitude) of a vector.
+  #
+  # @param vector [Array] The input vector.
+  #
+  # @return [Float] The magnitude of the vector.
+  #
+  # @example
+  #   norm([3, 4]) # => 5.0
+  def norm(vector)
+    s = 0.0
+    vector.each { s += _1.abs2 }
+    Math.sqrt(s)
+  end
+
+  # Converts an array to a Numo NArray.
+  #
+  # @param [Array] vector The input array to be converted.
+  #
+  # @return [Numo::NArray] The converted NArray, or the original if it's already a Numo NArray.
+  #
+  # @example Convert an array to a Numo NArray
+  #   convert_to_vector([1, 2, 3]) # => Numo::NArray[1, 2, 3]
+  def convert_to_vector(vector)
+    vector.is_a?(Numo::NArray) and return vector
+    Numo::NArray[*vector]
+  end
+end

data/lib/documentrix/utils/tags.rb

@@ -0,0 +1,112 @@
+require 'term/ansicolor'
+
+class Documentrix::Utils::Tags
+  class Tag < String
+    include Term::ANSIColor
+
+    # The initialize method sets up the Tag object by calling its superclass's
+    # constructor and setting the source attribute.
+    #
+    # @param tag [String] the string representation of the tag
+    # @param source [String, nil] the source URL for the tag (default: nil)
+    def initialize(tag, source: nil)
+      super(tag.to_s.gsub(/\A#+/, ''))
+      self.source = source
+    end
+
+    attr_accessor :source # the source URL for the tag
+
+    # The to_s method formats the tag string for output, including source URL
+    # if requested.
+    #
+    # @param link [FalseClass, TrueClass] whether to include source URL (default: true)
+    #
+    # @return [String] the formatted tag string
+    def to_s(link: true)
+      tag_string = start_with?(?#) ? super() : ?# + super()
+      my_source  = source
+      if link && my_source
+        unless my_source =~ %r(\A(https?|file)://)
+          my_source = 'file://%s' % File.expand_path(my_source)
+        end
+        hyperlink(my_source) { tag_string }
+      else
+        tag_string
+      end
+    end
+  end
+
+  # The initialize method sets up the Documentrix::Utils::Tags object by
+  # processing an array of tags and adding them to the internal set.
+  #
+  # @param tags [Array<String>] the input array of strings representing tags
+  # @param source [String, nil] the optional source URL for the tags (default: nil)
+  #
+  # @example
+  #   Documentrix::Utils::Tags.new(%w[ foo bar ])
+  #
+  # @return [Documentrix::Utils::Tags] an instance of Documentrix::Utils::Tags
+  def initialize(tags = [], source: nil)
+    tags = Array(tags)
+    @set = []
+    tags.each { |tag| add(tag, source:) }
+  end
+
+  def add(tag, source: nil)
+    unless tag.is_a?(Tag)
+      tag = Tag.new(tag, source:)
+    end
+    index = @set.bsearch_index { _1 >= tag }
+    if index == nil
+      @set.push(tag)
+    elsif @set.at(index) != tag
+      @set.insert(index, tag)
+    end
+    self
+  end
+
+  # The empty? method checks if the Tags instance's set is empty.
+  #
+  # @return [TrueClass] true if the set is empty, false otherwise
+  def empty?
+    @set.empty?
+  end
+
+  # The size method returns the number of elements in the set.
+  #
+  # @return [Integer] The size of the set.
+  def size
+    @set.size
+  end
+
+
+  # The clear method resets the Documentrix::Utils::Tags instance's set by
+  # calling its clear method.
+  #
+  # @return [Documentrix::Utils::Tags] self
+  def clear
+    @set.clear
+    self
+  end
+
+  # The each method iterates over this Tags instance's set and yields each tags
+  # to the given block.
+  #
+  # @yield [element] Each tag in the set
+  #
+  # @return [Documentrix::Utils::Tags] self
+  def each(&block)
+    @set.each(&block)
+    self
+  end
+  include Enumerable
+
+  # The to_s method formats the tags string for output, including source URL if requested.
+  #
+  # @param link [FalseClass, TrueClass] whether to include source URL (default: true)
+  #
+  # @return [Array<String>] the array of formatted tags strings
+  def to_s(link: true)
+    @set.map { |tag| tag.to_s(link:) } * ' '
+  end
+end

data/lib/documentrix/utils.rb

@@ -0,0 +1,5 @@
+module Documentrix::Utils
+end
+require 'documentrix/utils/colorize_texts'
+require 'documentrix/utils/math'
+require 'documentrix/utils/tags'

data/lib/documentrix/version.rb

@@ -0,0 +1,8 @@
+module Documentrix
+  # Documentrix version
+  VERSION         = '0.0.0'
+  VERSION_ARRAY   = VERSION.split('.').map(&:to_i) # :nodoc:
+  VERSION_MAJOR   = VERSION_ARRAY[0] # :nodoc:
+  VERSION_MINOR   = VERSION_ARRAY[1] # :nodoc:
+  VERSION_BUILD   = VERSION_ARRAY[2] # :nodoc:
+end

data/lib/documentrix.rb

@@ -0,0 +1,11 @@
+module Documentrix
+  module Utils
+  end
+end
+
+require 'json'
+require 'infobar'
+require 'tins'
+require 'documentrix/version'
+require 'documentrix/utils'
+require 'documentrix/documents'

data/spec/assets/embeddings.json

@@ -0,0 +1 @@
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