dgrep 0.1.0

checksums.yaml

@@ -0,0 +1,7 @@
+---
+SHA1:
+  metadata.gz: a4b5108c5653d5773abfdff18f359a46937bdecb
+  data.tar.gz: a23bb4217d3cac50030035dc3ecf00017385fb5c
+SHA512:
+  metadata.gz: df427ec0b65008863ad4990a85c3a1afff464023d1185589846e1f6900123fbe72075948c10efc2f643480db793e9f0e93bda840631a24b320e7866f46336e04
+  data.tar.gz: 4973e023b8e0ab91cecf989e7120c9c22def5a780c4f18ca706302f971acecc0a94726bf44443bf226b4f0a0e31f0d3cdf67f2dcf579b023d5ef7dfc6b7d8380

data/.gitignore

@@ -0,0 +1,9 @@
+/.bundle/
+/.yardoc
+/Gemfile.lock
+/_yardoc/
+/coverage/
+/doc/
+/pkg/
+/spec/reports/
+/tmp/

data/Gemfile

@@ -0,0 +1,4 @@
+source 'https://rubygems.org'
+
+# Specify your gem's dependencies in dgrep.gemspec
+gemspec

data/LICENSE.txt

@@ -0,0 +1,21 @@
+The MIT License (MIT)
+
+Copyright (c) 2016 Nishimoto
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+THE SOFTWARE.

data/README.md

@@ -0,0 +1,59 @@
+# Dgrep
+
+dgrep is grep program for tsv or csv file.
+
+## Installation
+
+install it yourself as:
+
+    $ gem install dgrep
+
+## Usage
+
+If there is this file
+
+```:sample.txt
+	a	b	c
+d	1	2	3
+e	4	5	6
+f	7	8	9
+```
+
+and you want to get this output,
+
+
+```
+	a	b	c
+d	1	2	3
+```
+
+you only do
+
+```
+$ dgrep "d" sample.txt
+```
+
+if you wan to get this outpus,
+
+```
+	a
+d	1
+e	4
+f	7
+```
+
+you only do
+
+```
+dgrep -c "a" sample.txt
+```
+
+## Contributing
+
+Bug reports and pull requests are welcome on GitHub at https://github.com/nishimoto/dgrep.
+
+
+## License
+
+The gem is available as open source under the terms of the [MIT License](http://opensource.org/licenses/MIT).
+

data/Rakefile

@@ -0,0 +1,2 @@
+require "bundler/gem_tasks"
+task :default => :spec

data/bin/console

@@ -0,0 +1,14 @@
+#!/usr/bin/env ruby
+
+require "bundler/setup"
+require "dgrep"
+
+# You can add fixtures and/or initialization code here to make experimenting
+# with your gem easier. You can also use a different console, if you like.
+
+# (If you use this, don't forget to add pry to your Gemfile!)
+# require "pry"
+# Pry.start
+
+require "irb"
+IRB.start

data/bin/dgrep

@@ -0,0 +1,224 @@
+#!/usr/bin/env ruby
+# require library
+require "dgrep"
+require "optparse"
+require "csv"
+require "pry"
+require "json"
+
+###################################################
+# over ride
+class Fixnum
+	def must(str, num)
+		if str == "be greater than"
+			if self <= num
+				raise "dgrep: You need #{num+1} or more argv\n"
+			end
+		end
+	end
+end
+
+class Array
+
+	def sum
+		self.inject{|sum, n| sum + n }
+	end
+
+	def mean
+		self.inject(0.0){|r,i| r+=i }/self.size.to_f
+	end
+
+	def median
+		self.size % 2 == 0 ? self[self.size/2 - 1, 2].inject(:+) / 2.0 : self[self.size/2]
+	end
+
+	def to_f
+		self.map { |e| e.to_i }
+	end
+
+	def to_f
+		self.map { |e| e.to_f }
+	end
+end
+
+
+###################################################
+# definitions.
+def optparse
+	hash = Hash.new()
+	hash2 = Hash.new() # 使用されているかどうか
+	opts = OptionParser.new
+
+	opts.on("-c") do |opt|
+		hash[:c] = true
+		hash2[:c] = true
+	end
+
+	opts.on("-d [VAL]") do |opt|
+		hash[:sep] = opt
+		hash2[:sep] = true
+	end
+
+	opts.on("-e [VAL]" ) do |opt|
+		hash[:e] = opt
+		hash2[:e] = true
+	end
+
+	opts.on("-h [VAL]") do |opt|
+		if opt == "false" || opt == "F"
+			hash[:h] = false
+		elsif opt == "true" || opt == "T"
+			hash[:h] = true
+		end
+		hash2[:h] = true
+	end
+
+	# quote
+	opts.on("-q [VAL]") do |opt|
+		hash[:q] = opt
+		hash2[:q] = true
+	end
+
+	opts.on("-i [VAL]") do |opt|
+		hash[:i] = opt
+		hash2[:i] = true
+	end
+
+	opts.on("--config") do |opt|
+		hash[:set_conf_mode] = true
+		hash2[:set_conf_mode] = true
+	end
+
+	opts.on("--get_config") do |opt|
+		hash2[:get_conf_mode] = true
+	end
+
+	opts.parse!
+
+	hash[:sep] ||= "\t"
+	# hash[:h]   ||= true
+	hash[:q]   ||= "\""
+	hash[:i]   ||= 0
+	return [hash, hash2]
+end
+
+def print_2d_array(arr_2d, conf)
+	arr_2d.each do |arr|
+		print CSV.generate_line(arr, col_sep: conf[:sep], quote_char: conf[:q])
+	end
+end
+
+def opfile_name(filename)
+	"#{filename.split(".")[0..-2].join(".")}.t.#{filename.split(".")[-1]}"
+end
+
+def tranpose_tsv(filename, sep)
+	CSV.open(opfile_name(filename), "w", col_sep: sep) do |csv|
+		CSV.read(filename, col_sep: sep).transpose.each do |arr|
+			csv << arr
+		end
+	end
+end
+
+def set_conf_to_config_file(conf_filename, conf)
+	File.open(conf_filename, "w") do |file|
+		str = JSON.dump(conf, file)
+	end
+end
+
+def get_conf_from_config_file(conf_filename, conf, conf_used)
+	hash = JSON.load(File.open(conf_filename, "r"))
+	hash.each do |k,v|
+		if !conf_used[k.to_sym]
+			conf[k.to_sym] = hash[k]
+			# as in  Json.dump convert false to "false" in set_conf_to_config_file function.
+			conf[k.to_sym] = false if hash[k] == "false"
+			conf[k.to_sym] = true if hash[k] == "true"
+		end
+	end
+	return conf
+end
+
+###################################################
+# opt parse
+conf, conf_used = optparse
+conf_filename = File.expand_path("../../lib/conf.json", __FILE__)
+if conf[:set_conf_mode]
+	set_conf_to_config_file(conf_filename, conf)
+	exit
+else
+	conf = get_conf_from_config_file(conf_filename, conf, conf_used)
+end
+
+if conf_used[:get_conf_mode]
+	p conf
+	exit
+end
+
+# This program need greped_str, grep_str
+greped_str_filename_array = []
+if conf[:e]
+	ARGV.length.must("be greater than", 0)
+	greped_str_filename_array = ARGV[0..-1]
+else
+	ARGV.length.must("be greater than", 1)
+	greped_str_filename_array = ARGV[1..-1]
+end
+
+grep_str = ARGV[0]
+
+###################################################
+# CSV.parse
+greped_str_filename_array.each do |filename|
+	# transpose tsv if -c option.
+	if conf[:c]
+		tranpose_tsv(filename, conf[:sep])
+		filename = opfile_name(filename)
+	end
+
+	# grep main function.
+	file = File.open(filename,"r")
+
+	# main array for output.
+	output_array = []
+
+	# process header
+	if conf[:h]
+		# p "hogehoge"
+		header_array = CSV.parse(file.gets, col_sep: conf[:sep], quote_char: conf[:q])
+		output_array.push header_array[0]
+	end
+
+	if conf[:i]
+		index = conf[:i].to_i
+		there_is_index = true
+	else
+		there_is_index = false
+	end
+
+	CSV.parse(file, col_sep: conf[:sep], quote_char: conf[:q]).each do |arr|
+		line = CSV.generate_line(arr, col_sep: conf[:sep], quote_char: conf[:q])
+
+		if there_is_index
+			rowname = arr[index]
+			colname = rowname
+			arr.delete_at(index)
+		end
+
+		if conf_used[:e]
+			if eval(conf[:e])
+				arr.insert(index, rowname) if there_is_index
+				output_array.push arr
+			end
+		else
+			if line.index(grep_str)
+				arr.insert(index, rowname) if there_is_index
+			 	output_array.push arr
+			end
+		end
+	end
+	if conf[:c]
+		output_array = output_array.transpose
+	end
+	print_2d_array(output_array, conf)
+end

data/bin/setup

@@ -0,0 +1,8 @@
+#!/usr/bin/env bash
+set -euo pipefail
+IFS=$'\n\t'
+set -vx
+
+bundle install
+
+# Do any other automated setup that you need to do here

data/dgrep.gemspec

@@ -0,0 +1,35 @@
+# coding: utf-8
+lib = File.expand_path('../lib', __FILE__)
+$LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
+require 'dgrep/version'
+
+Gem::Specification.new do |spec|
+  spec.name          = "dgrep"
+  spec.version       = Dgrep::VERSION
+  spec.authors       = ["Nishimoto"]
+  spec.email         = ["thinkn1108@gmail.com"]
+
+  spec.summary       = %q{grep tsv,csv file}
+  spec.description   = %q{grep tsv,csv file}
+  spec.homepage      = "https://github.com/nishimoto/dgrep"
+  spec.license       = "MIT"
+
+  # Prevent pushing this gem to RubyGems.org. To allow pushes either set the 'allowed_push_host'
+  # to allow pushing to a single host or delete this section to allow pushing to any host.
+  # if spec.respond_to?(:metadata)
+  #   spec.metadata['allowed_push_host'] = "TODO: Set to 'http://mygemserver.com'"
+  # else
+  #   raise "RubyGems 2.0 or newer is required to protect against " \
+  #     "public gem pushes."
+  # end
+
+  spec.files         = `git ls-files -z`.split("\x0").reject do |f|
+    f.match(%r{^(test|spec|features)/})
+  end
+  spec.bindir        = "exe"
+  spec.executables   = spec.files.grep(%r{^exe/}) { |f| File.basename(f) }
+  spec.require_paths = ["lib"]
+
+  spec.add_development_dependency "bundler", "~> 1.13"
+  spec.add_development_dependency "rake", "~> 10.0"
+end

data/exe/dgrep

@@ -0,0 +1,14 @@
+#!/usr/bin/env ruby
+
+require "dgrep"
+require "thor"
+
+module Dgrep
+	class CLI < Thor
+		default_task :hello
+		def hello
+			p Dir.pwd
+		end
+
+	end
+end

data/lib/conf.json

@@ -0,0 +1 @@
+{"set_conf_mode":true,"h":"true","sep":"\t","q":"\"","i":0}

data/lib/dgrep.rb

@@ -0,0 +1 @@
+require "dgrep/version"

data/lib/dgrep/version.rb

@@ -0,0 +1,3 @@
+module Dgrep
+  VERSION = "0.1.0"
+end

data/temp.txt

@@ -0,0 +1,100 @@
+A-1	58	73	84	94	85	27	394	O
+A-2	30	53	56	68	55	34	262	O
+A-3	49	77	75	84	63	23	348	O
+A-4	57	76	82	95	78	22	388	O
+A-5	65	90	77	88	79	25	399	O
+A-6	42	60	65	78	62	42	307	O
+A-7	44	61	72	83	61	28	321	O
+A-8	34	59	57	68	56	34	274	O
+A-9	52	67	83	92	74	11	368	O
+A-10	45	66	69	85	59	23	324	O
+A-11	59	72	73	86	74	23	364	O
+A-12	57	81	100	100	76		414	O
+A-13	52	67	81	94	72	28	366	O
+A-14	35	53	74	83	65	28	310	O
+A-15	46	74	66	78	56	22	320	O
+A-16	56	68	80	92	68	27	364	O
+A-17	66	81	70	80	77	29	374	O
+A-18	31	67	56	67	48	33	269	O
+A-19	61	77	76	89	71	27	374	O
+A-20	50	53	71	83	71	35	328	O
+A-21	53	71	81	97	67	25	369	O
+A-22	61	77	84	90	76		388	O
+A-23	46	72	67	84	60	29	329	O
+A-24	52	72	56	79	65	51	324	X
+A-25	62	86	74	94	69	39	385	O
+A-26	45	64	74	80	69	24	332	X
+A-27	43	69	73	80	56	12	321	O
+A-28	44	67	66	77	59	20	313	O
+A-29	45	62	49	69	52	44	277	O
+A-30	57	76	72	86	80	29	371	O
+A-31	32	59	68	76	59	18	294	O
+A-32	46	74	80	91	70	31	361	O
+A-33	55	73	80	88	76	12	372	O
+A-34	31	60	62	75	56	25	284	O
+A-35	36	58	68	70	59	15	291	O
+A-36	36	68	68	78	58	26	308	O
+A-37	37	49	72	73	58	13	289	O
+A-38	61	71	94	103	81	17	410	O
+A-39	28	60	58	68	48	43	262	O
+A-40	53	71	73	81	70	6	348	O
+A-41	41	64	62	76	54	29	297	O
+A-42	52	66	70	72	72	11	332	X
+A-43	36	58	63	69	60	12	286	O
+A-44	67	80	82	95	91	35	415	O
+A-45	56	68	69	86	67	39	346	O
+A-46	47	71	74	90	63	37	345	O
+A-47	45	71	83	87	58	5	344	X
+A-48	59	67	72	83	79	33	360	O
+A-49	55	75	94	96	81	3	401	O
+A-50	34	63	56	56	57	6	266	O
+B-1	51	82	65	78	64	15	340	O
+B-2	48	60	77	95	65	37	345	O
+B-3	56	78	82	95	73	16	384	O
+B-4	52	75	69	87	69	36	352	O
+B-5	34	50	57	70	48	21	259	O
+B-6	50	69	71	89	65	39	344	X
+B-7	62	78	77	87	76	30	380	O
+B-8	53	82	70	80	68	4	353	O
+B-9	30	64	68	76	53	10	291	O
+B-10	53	78	68	77	66	11	342	O
+B-11	51	69	55	66	67	26	308	O
+B-12	44	65	78	81	71	20	339	O
+B-13	52	81	71	81	73	22	358	O
+B-14	51	76	78	89	70	27	364	O
+B-15	59	71	86	99	79	32	394	O
+B-16	58	78	74	92	74	24	376	O
+B-17	49	70	78	83	71	18	351	O
+B-18	54	73	82	88	83	13	380	O
+B-19	57	79	73	86	71	23	366	O
+B-20	49	68	74	83	67	26	341	O
+B-21	51	75	73	82	75	11	356	O
+B-22	45	65	82	81	75	8	348	O
+B-23	44	59	77	87	66	13	333	O
+B-24	60	82	67	84	79	29	372	O
+B-25	76	97	99	107	88	4	467	O
+B-26	52	67	69	86	65	38	339	X
+B-27	50	53	71	81	73	20	328	X
+B-28	52	81	86	100	73	24	392	O
+B-29	47	74	74	86	66	24	347	O
+B-30	49	66	63	83	60	34	321	O
+B-31	43	62	62	75	54	16	296	O
+B-32	49	75	62	73	62	24	321	O
+B-33	48	65	71	80	61	36	325	X
+B-34	80	98	94	107	97	13	476	O
+B-35	58	75	67	80	78	25	358	O
+B-36	52	74	56	70	68	39	320	O
+B-37	58	63	73	80	79	19	353	O
+B-38	37	71	80	86	58	11	332	O
+B-39	49	63	82	87	69	6	350	O
+B-40	53	75	58	75	63	33	324	X
+B-41	62	84	81	92	72	21	391	O
+B-42	32	63	68	74	50	13	287	O
+B-43	46	62	68	81	68	30	325	X
+B-44	61	76	82	94	79	23	392	O
+B-45	52	69	69	81	66	15	337	X
+B-46	44	79	66	73	63	23	325	X
+B-47	46	79	68	80	61	20	334	X
+B-48	46	83	55	68	48	21	300	O
+B-49	44	68	75	83	67	33	337	O
+B-50	62	80	87	100	88	14	417	O

metadata

@@ -0,0 +1,87 @@
+--- !ruby/object:Gem::Specification
+name: dgrep
+version: !ruby/object:Gem::Version
+  version: 0.1.0
+platform: ruby
+authors:
+- Nishimoto
+autorequire: 
+bindir: exe
+cert_chain: []
+date: 2016-12-31 00:00:00.000000000 Z
+dependencies:
+- !ruby/object:Gem::Dependency
+  name: bundler
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ~>
+      - !ruby/object:Gem::Version
+        version: '1.13'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ~>
+      - !ruby/object:Gem::Version
+        version: '1.13'
+- !ruby/object:Gem::Dependency
+  name: rake
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ~>
+      - !ruby/object:Gem::Version
+        version: '10.0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ~>
+      - !ruby/object:Gem::Version
+        version: '10.0'
+description: grep tsv,csv file
+email:
+- thinkn1108@gmail.com
+executables:
+- dgrep
+extensions: []
+extra_rdoc_files: []
+files:
+- .gitignore
+- Gemfile
+- LICENSE.txt
+- README.md
+- Rakefile
+- bin/console
+- bin/dgrep
+- bin/setup
+- dgrep.gemspec
+- exe/dgrep
+- lib/conf.json
+- lib/dgrep.rb
+- lib/dgrep/version.rb
+- temp.txt
+homepage: https://github.com/nishimoto/dgrep
+licenses:
+- MIT
+metadata: {}
+post_install_message: 
+rdoc_options: []
+require_paths:
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - '>='
+    - !ruby/object:Gem::Version
+      version: '0'
+required_rubygems_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - '>='
+    - !ruby/object:Gem::Version
+      version: '0'
+requirements: []
+rubyforge_project: 
+rubygems_version: 2.0.14.1
+signing_key: 
+specification_version: 4
+summary: grep tsv,csv file
+test_files: []