determinations_comparison 2.0.3 → 2.0.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (15) hide show
  1. data/Gemfile.lock +1 -1
  2. data/lib/determinations_comparison.rb +1 -1
  3. data/lib/determinations_comparison/version.rb +1 -1
  4. data/spec/determinations_comparison_spec.rb +7 -7
  5. data/spec/exe_comparedeterminations_spec.rb +2 -2
  6. data/spec/exe_cpplogreader_spec.rb +1 -1
  7. data/spec/html_table_of_peak_picking_log_spec.rb +1 -1
  8. data/spec/support/data/{test_batch_for_cpplogreader → test_batch}/file.json +0 -0
  9. data/spec/support/data/{test_batch_for_cpplogreader → test_batch}/file.po +0 -0
  10. data/spec/support/data/{test_batch_for_cpplogreader → test_batch}/file_withdiff_woscale.json +0 -0
  11. data/spec/support/data/{test_batch_for_cpplogreader → test_batch}/file_withdiff_woscale.po +0 -0
  12. data/spec/support/data/{test_batch_for_cpplogreader → test_batch}/file_within_thresholds.json +0 -0
  13. data/spec/support/data/{test_batch_for_cpplogreader → test_batch}/file_within_thresholds.po +0 -0
  14. data/spec/support/data/{test_batch_for_cpplogreader → test_batch}/log.txt +0 -0
  15. metadata +28 -28
data/Gemfile.lock CHANGED
@@ -1,7 +1,7 @@
1
1
  PATH
2
2
  remote: .
3
3
  specs:
4
- determinations_comparison (2.0.2)
4
+ determinations_comparison (2.0.4)
5
5
  htmlentities
6
6
  uuidtools
7
7
 
data/lib/determinations_comparison.rb CHANGED
@@ -341,7 +341,7 @@ module DeterminationsComparison
341
341
  end
342
342
 
343
343
  elsif !(boolPeakPickedByBaseline) && boolPeakPickedByUnderTest
344
- v['peak_picked'] = 'by undertest by not by baseline'
344
+ v['peak_picked'] = 'by undertest but not by baseline'
345
345
  elsif boolPeakPickedByBaseline && boolPeakPickedByUnderTest
346
346
 
347
347
  if boolSimpsonsRuleByBaseLine
data/lib/determinations_comparison/version.rb CHANGED
@@ -1,3 +1,3 @@
1
1
  module DeterminationsComparison
2
- VERSION = "2.0.3"
2
+ VERSION = "2.0.4"
3
3
  end
data/spec/determinations_comparison_spec.rb CHANGED
@@ -6,27 +6,27 @@ require_relative '../lib/determinations_comparison'
6
6
  describe 'determinations_comparison' do
7
7
 
8
8
  let(:baseline_file) do
9
- File.join('spec','support','data','test_batch_for_cpplogreader','file.po')
9
+ File.join('spec','support','data','test_batch','file.po')
10
10
  end
11
11
 
12
12
  let(:undertest_file) do
13
- File.join('spec','support','data','test_batch_for_cpplogreader','file.json')
13
+ File.join('spec','support','data','test_batch','file.json')
14
14
  end
15
15
 
16
16
  let(:baseline_within_thresholds_file) do
17
- File.join('spec','support','data','test_batch_for_cpplogreader','file_within_thresholds.po')
17
+ File.join('spec','support','data','test_batch','file_within_thresholds.po')
18
18
  end
19
19
 
20
20
  let(:undertest_within_thresholds_file) do
21
- File.join('spec','support','data','test_batch_for_cpplogreader','file_within_thresholds.json')
21
+ File.join('spec','support','data','test_batch','file_within_thresholds.json')
22
22
  end
23
23
 
24
24
  let(:baseline_diffwoscale_file) do
25
- File.join('spec','support','data','test_batch_for_cpplogreader','file_withdiff_woscale.po')
25
+ File.join('spec','support','data','test_batch','file_withdiff_woscale.po')
26
26
  end
27
27
 
28
28
  let(:undertest_diffwoscale_file) do
29
- File.join('spec','support','data','test_batch_for_cpplogreader','file_withdiff_woscale.json')
29
+ File.join('spec','support','data','test_batch','file_withdiff_woscale.json')
30
30
  end
31
31
 
32
32
 
@@ -35,7 +35,7 @@ describe 'determinations_comparison' do
35
35
  end
36
36
 
37
37
  let(:folderpath_with_log) do
38
- File.join('spec','support','data','test_batch_for_cpplogreader')
38
+ File.join('spec','support','data','test_batch')
39
39
  end
40
40
 
41
41
  before :each do
data/spec/exe_comparedeterminations_spec.rb CHANGED
@@ -4,11 +4,11 @@ require_relative '../lib/exe_comparedeterminations'
4
4
  describe 'EXE CompareDeterminations' do
5
5
 
6
6
  let(:po_file) do
7
- File.join('spec','support','data','test_batch_for_cpplogreader','file.po')
7
+ File.join('spec','support','data','test_batch','file.po')
8
8
  end
9
9
 
10
10
  let(:compound_file) do
11
- File.join('spec','support','data','test_batch_for_cpplogreader','file.json')
11
+ File.join('spec','support','data','test_batch','file.json')
12
12
  end
13
13
 
14
14
  let(:filepath) do
data/spec/exe_cpplogreader_spec.rb CHANGED
@@ -6,7 +6,7 @@ describe 'EXE CPPlogReader' do
6
6
 
7
7
  it 'should output JSON when run' do
8
8
 
9
- batch_folderpath = "spec/support/data/test_batch_for_cpplogreader"
9
+ batch_folderpath = "spec/support/data/test_batch"
10
10
  sample_index = 4
11
11
  analyte_name = 'isoleucine_plasma_csf'
12
12
  chromatogram_type = 'Quant'
data/spec/html_table_of_peak_picking_log_spec.rb CHANGED
@@ -5,7 +5,7 @@ describe 'html_table_of_peak_picking_log' do
5
5
 
6
6
  let(:html_table) do
7
7
 
8
- batch_folderpath = "spec/support/data/test_batch_for_cpplogreader"
8
+ batch_folderpath = "spec/support/data/test_batch"
9
9
  sample_index = 1
10
10
  analyte_name = 'MMA'
11
11
  chromatogram_type = 'Quant'
metadata CHANGED
@@ -1,7 +1,7 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: determinations_comparison
3
3
  version: !ruby/object:Gem::Version
4
- version: 2.0.3
4
+ version: 2.0.4
5
5
  prerelease:
6
6
  platform: ruby
7
7
  authors:
@@ -9,7 +9,7 @@ authors:
9
9
  autorequire:
10
10
  bindir: bin
11
11
  cert_chain: []
12
- date: 2013-07-09 00:00:00.000000000 Z
12
+ date: 2013-07-11 00:00:00.000000000 Z
13
13
  dependencies:
14
14
  - !ruby/object:Gem::Dependency
15
15
  name: bundler
@@ -32,7 +32,7 @@ dependencies:
32
32
  requirement: !ruby/object:Gem::Requirement
33
33
  none: false
34
34
  requirements:
35
- - - ! '>='
35
+ - - '>='
36
36
  - !ruby/object:Gem::Version
37
37
  version: '0'
38
38
  type: :development
@@ -40,7 +40,7 @@ dependencies:
40
40
  version_requirements: !ruby/object:Gem::Requirement
41
41
  none: false
42
42
  requirements:
43
- - - ! '>='
43
+ - - '>='
44
44
  - !ruby/object:Gem::Version
45
45
  version: '0'
46
46
  - !ruby/object:Gem::Dependency
@@ -48,7 +48,7 @@ dependencies:
48
48
  requirement: !ruby/object:Gem::Requirement
49
49
  none: false
50
50
  requirements:
51
- - - ! '>='
51
+ - - '>='
52
52
  - !ruby/object:Gem::Version
53
53
  version: '0'
54
54
  type: :development
@@ -56,7 +56,7 @@ dependencies:
56
56
  version_requirements: !ruby/object:Gem::Requirement
57
57
  none: false
58
58
  requirements:
59
- - - ! '>='
59
+ - - '>='
60
60
  - !ruby/object:Gem::Version
61
61
  version: '0'
62
62
  - !ruby/object:Gem::Dependency
@@ -64,7 +64,7 @@ dependencies:
64
64
  requirement: !ruby/object:Gem::Requirement
65
65
  none: false
66
66
  requirements:
67
- - - ! '>='
67
+ - - '>='
68
68
  - !ruby/object:Gem::Version
69
69
  version: '0'
70
70
  type: :development
@@ -72,7 +72,7 @@ dependencies:
72
72
  version_requirements: !ruby/object:Gem::Requirement
73
73
  none: false
74
74
  requirements:
75
- - - ! '>='
75
+ - - '>='
76
76
  - !ruby/object:Gem::Version
77
77
  version: '0'
78
78
  - !ruby/object:Gem::Dependency
@@ -80,7 +80,7 @@ dependencies:
80
80
  requirement: !ruby/object:Gem::Requirement
81
81
  none: false
82
82
  requirements:
83
- - - ! '>='
83
+ - - '>='
84
84
  - !ruby/object:Gem::Version
85
85
  version: '0'
86
86
  type: :runtime
@@ -88,7 +88,7 @@ dependencies:
88
88
  version_requirements: !ruby/object:Gem::Requirement
89
89
  none: false
90
90
  requirements:
91
- - - ! '>='
91
+ - - '>='
92
92
  - !ruby/object:Gem::Version
93
93
  version: '0'
94
94
  - !ruby/object:Gem::Dependency
@@ -96,7 +96,7 @@ dependencies:
96
96
  requirement: !ruby/object:Gem::Requirement
97
97
  none: false
98
98
  requirements:
99
- - - ! '>='
99
+ - - '>='
100
100
  - !ruby/object:Gem::Version
101
101
  version: '0'
102
102
  type: :runtime
@@ -104,7 +104,7 @@ dependencies:
104
104
  version_requirements: !ruby/object:Gem::Requirement
105
105
  none: false
106
106
  requirements:
107
- - - ! '>='
107
+ - - '>='
108
108
  - !ruby/object:Gem::Version
109
109
  version: '0'
110
110
  description: compares two versions of same determination file
@@ -140,13 +140,13 @@ files:
140
140
  - spec/html_table_of_peak_picking_log_spec.rb
141
141
  - spec/html_table_of_property_differences_spec.rb
142
142
  - spec/support/data/log.txt
143
- - spec/support/data/test_batch_for_cpplogreader/file.json
144
- - spec/support/data/test_batch_for_cpplogreader/file.po
145
- - spec/support/data/test_batch_for_cpplogreader/file_withdiff_woscale.json
146
- - spec/support/data/test_batch_for_cpplogreader/file_withdiff_woscale.po
147
- - spec/support/data/test_batch_for_cpplogreader/file_within_thresholds.json
148
- - spec/support/data/test_batch_for_cpplogreader/file_within_thresholds.po
149
- - spec/support/data/test_batch_for_cpplogreader/log.txt
143
+ - spec/support/data/test_batch/file.json
144
+ - spec/support/data/test_batch/file.po
145
+ - spec/support/data/test_batch/file_withdiff_woscale.json
146
+ - spec/support/data/test_batch/file_withdiff_woscale.po
147
+ - spec/support/data/test_batch/file_within_thresholds.json
148
+ - spec/support/data/test_batch/file_within_thresholds.po
149
+ - spec/support/data/test_batch/log.txt
150
150
  - spec/utilities_spec.rb
151
151
  homepage: ''
152
152
  licenses:
@@ -158,13 +158,13 @@ require_paths:
158
158
  required_ruby_version: !ruby/object:Gem::Requirement
159
159
  none: false
160
160
  requirements:
161
- - - ! '>='
161
+ - - '>='
162
162
  - !ruby/object:Gem::Version
163
163
  version: '0'
164
164
  required_rubygems_version: !ruby/object:Gem::Requirement
165
165
  none: false
166
166
  requirements:
167
- - - ! '>='
167
+ - - '>='
168
168
  - !ruby/object:Gem::Version
169
169
  version: '0'
170
170
  requirements: []
@@ -183,11 +183,11 @@ test_files:
183
183
  - spec/html_table_of_peak_picking_log_spec.rb
184
184
  - spec/html_table_of_property_differences_spec.rb
185
185
  - spec/support/data/log.txt
186
- - spec/support/data/test_batch_for_cpplogreader/file.json
187
- - spec/support/data/test_batch_for_cpplogreader/file.po
188
- - spec/support/data/test_batch_for_cpplogreader/file_withdiff_woscale.json
189
- - spec/support/data/test_batch_for_cpplogreader/file_withdiff_woscale.po
190
- - spec/support/data/test_batch_for_cpplogreader/file_within_thresholds.json
191
- - spec/support/data/test_batch_for_cpplogreader/file_within_thresholds.po
192
- - spec/support/data/test_batch_for_cpplogreader/log.txt
186
+ - spec/support/data/test_batch/file.json
187
+ - spec/support/data/test_batch/file.po
188
+ - spec/support/data/test_batch/file_withdiff_woscale.json
189
+ - spec/support/data/test_batch/file_withdiff_woscale.po
190
+ - spec/support/data/test_batch/file_within_thresholds.json
191
+ - spec/support/data/test_batch/file_within_thresholds.po
192
+ - spec/support/data/test_batch/log.txt
193
193
  - spec/utilities_spec.rb