dcm_dict 0.26.0 → 0.31.0
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- checksums.yaml +4 -4
- data/CHANGELOG.md +38 -0
- data/LICENSE +1 -1
- data/README.md +80 -65
- data/bin/dcm_dict_converter.rb +3 -3
- data/lib/dcm_dict.rb +1 -1
- data/lib/dcm_dict/dictionary/base_dictionary.rb +1 -1
- data/lib/dcm_dict/dictionary/base_record.rb +1 -1
- data/lib/dcm_dict/dictionary/data_element_dictionary.rb +1 -1
- data/lib/dcm_dict/dictionary/data_element_record.rb +1 -1
- data/lib/dcm_dict/dictionary/uid_dictionary.rb +2 -4
- data/lib/dcm_dict/dictionary/uid_record.rb +6 -1
- data/lib/dcm_dict/encoder/data_to_code.rb +2 -2
- data/lib/dcm_dict/error/dictionary_error.rb +1 -1
- data/lib/dcm_dict/ext/object_extension.rb +1 -1
- data/lib/dcm_dict/refine/array_refine.rb +1 -1
- data/lib/dcm_dict/refine/data_element_refine.rb +1 -1
- data/lib/dcm_dict/refine/internal/array_refine_internal.rb +1 -1
- data/lib/dcm_dict/refine/internal/hash_refine_internal.rb +14 -1
- data/lib/dcm_dict/refine/internal/string_refine_internal.rb +1 -1
- data/lib/dcm_dict/refine/string_refine.rb +1 -1
- data/lib/dcm_dict/refine/symbol_refine.rb +2 -1
- data/lib/dcm_dict/refine/uid_refine.rb +1 -1
- data/lib/dcm_dict/rubies/rb_ext.rb +1 -1
- data/lib/dcm_dict/source_data/data_elements_data.rb +84 -3
- data/lib/dcm_dict/source_data/detached_data.rb +1 -1
- data/lib/dcm_dict/source_data/uid_values_data.rb +445 -421
- data/lib/dcm_dict/version.rb +3 -3
- data/lib/dcm_dict/xml/constant.rb +3 -2
- data/lib/dcm_dict/xml/field_data.rb +1 -1
- data/lib/dcm_dict/xml/nokogiri_tool.rb +1 -1
- data/lib/dcm_dict/xml/rexml_tool.rb +1 -1
- data/lib/dcm_dict/xml/tag_field_data.rb +1 -1
- data/lib/dcm_dict/xml/uid_field_data.rb +14 -4
- data/lib/dcm_dict/xml/xml_tool.rb +1 -1
- data/spec/data_element_sample_spec_helper.rb +12 -2
- data/spec/data_element_shared_example_spec_helper.rb +1 -1
- data/spec/dcm_dict/dictionary/data_element_dictionary_spec.rb +1 -1
- data/spec/dcm_dict/dictionary/data_element_record_spec.rb +1 -1
- data/spec/dcm_dict/dictionary/uid_dictionary_spec.rb +62 -17
- data/spec/dcm_dict/dictionary/uid_record_spec.rb +8 -4
- data/spec/dcm_dict/encoder/data_to_code_spec.rb +2 -2
- data/spec/dcm_dict/ext/object_extension_spec.rb +1 -1
- data/spec/dcm_dict/refine/array_refine_spec.rb +1 -1
- data/spec/dcm_dict/refine/internal/array_refine_internal_spec.rb +1 -1
- data/spec/dcm_dict/refine/internal/hash_refine_internal_spec.rb +19 -1
- data/spec/dcm_dict/refine/internal/string_refine_internal_spec.rb +1 -1
- data/spec/dcm_dict/refine/string_refine_spec.rb +4 -4
- data/spec/dcm_dict/refine/symbol_refine_spec.rb +26 -1
- data/spec/dcm_dict/rubies/rb_ext_spec.rb +1 -1
- data/spec/dcm_dict/source_data/data_elements_data_spec.rb +1 -1
- data/spec/dcm_dict/source_data/detached_data_spec.rb +1 -1
- data/spec/dcm_dict/source_data/uid_values_data_spec.rb +1 -1
- data/spec/dcm_dict/version_spec.rb +1 -1
- data/spec/dcm_dict/xml/tag_field_data_spec.rb +1 -1
- data/spec/dcm_dict/xml/uid_field_data_spec.rb +1 -1
- data/spec/dictionary_shared_example_spec_helper.rb +3 -3
- data/spec/refine_shared_example_spec_helper.rb +1 -1
- data/spec/spec_helper.rb +1 -1
- data/spec/xml_sample_spec_helper.rb +80 -32
- metadata +18 -18
data/lib/dcm_dict/version.rb
CHANGED
@@ -1,5 +1,5 @@
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#
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-
# Copyright (C) 2014-
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+
# Copyright (C) 2014-2020 Enrico Rivarola
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#
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# This file is part of DcmDict gem (dcm_dict).
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#
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@@ -22,6 +22,6 @@
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# applicable local, state, national or international regulations.
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#
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module DcmDict
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-
VERSION = "0.
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26
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-
DICOM_DOC_VERSION = "
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+
VERSION = "0.31.0"
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+
DICOM_DOC_VERSION = "2020e"
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end
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@@ -1,5 +1,5 @@
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#
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-
# Copyright (C) 2014-
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+
# Copyright (C) 2014-2020 Enrico Rivarola
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#
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# This file is part of DcmDict gem (dcm_dict).
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#
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@@ -32,7 +32,8 @@ module DcmDict
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UidNodeSetIdx = { uid_value: 0,
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uid_name: 1,
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-
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+
uid_key: 2,
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+
uid_type: 3}.freeze
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end
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end
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#
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-
# Copyright (C) 2014-
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+
# Copyright (C) 2014-2020 Enrico Rivarola
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#
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# This file is part of DcmDict gem (dcm_dict).
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#
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@@ -27,6 +27,7 @@ module DcmDict
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# Class to handle uid data
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class UidFieldData < FieldData
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using DcmDict::Refine::Internal::StringRefineInternal
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+
using DcmDict::Refine::Internal::HashRefineInternal
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MISSING_NAME_VALUE = "(Retired)"
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@@ -38,18 +39,27 @@ module DcmDict
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# Extract and build uid data
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def uid_data
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extract_base_data
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@data.check_base_data_uid_field!
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# extend_base_data
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@data
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end
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private
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def extract_base_data
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value = extract_content_data(:uid_value)
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type = extract_content_data(:uid_type).uid_type_to_sym
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+
key = extract_content_data(:uid_key)
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name = check_uid_name_for(extract_content_data(:uid_name), value, type)
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-
{ uid_value: value,
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-
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-
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+
@data = { uid_value: value,
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uid_name: name,
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uid_type: type,
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uid_key: key }
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end
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+
# def extend_base_data
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+
# @data[:uid_sym] = @data[:uid_key].tag_key_to_sym
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# end
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+
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# patch for 2016a source data ...
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def check_uid_name_for(name, value, type)
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name = "#{value} #{MISSING_NAME_VALUE}" if (name == MISSING_NAME_VALUE)
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@@ -1,6 +1,6 @@
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# coding: utf-8
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#
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-
# Copyright (C) 2014-
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+
# Copyright (C) 2014-2020 Enrico Rivarola
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#
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# This file is part of DcmDict gem (dcm_dict).
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#
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@@ -152,7 +152,17 @@ module DataElementSampleSpecHelper
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[0x0002,0x0027] => { tag_ps: '(0002,0027)', tag_name: "Sending Presentation Address", tag_key: 'SendingPresentationAddress',
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tag_vr: [:UR], tag_vm: ["1"], tag_str: '(0002,0027)', tag_sym: :sending_presentation_address,
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tag_ndm: '00020027', tag_ary: [0x0002,0x0027], tag_multiple: false,
|
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-
tag_note: ''}
|
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+
tag_note: ''},
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+
[0x3010,0x0096] => { tag_ps: '(3010,0096)', tag_name: "Radiation Source Coordinate System Pitch Angle",
|
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+
tag_key: 'RadiationSourceCoordinateSystemPitchAngle', tag_vr: [:FD], tag_vm: ["1"], tag_str: '(3010,0096)',
|
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+
tag_sym: :radiation_source_coordinate_system_pitch_angle, tag_ndm: '30100096',
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+
tag_ary: [0x3010,0x0096], tag_multiple: false, tag_note: ''},
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+
[0x0016,0x1002] => { tag_ps: '(0016,1002)', tag_name: "Emitter Color Temperature", tag_key: 'EmitterColorTemperature',
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+
tag_vr: [:DS], tag_vm: ["1"], tag_str: '(0016,1002)', tag_sym: :emitter_color_temperature,
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+
tag_ndm: '00161002', tag_ary: [0x0016,0x1002], tag_multiple: false, tag_note: ''},
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+
[0x0072,0x0082] => { tag_ps: '(0072,0082)', tag_name: "Selector SV Value", tag_key: 'SelectorSVValue',
|
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+
tag_vr: [:SV], tag_vm: ["1-n"], tag_str: '(0072,0082)', tag_sym: :selector_sv_value,
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+
tag_ndm: '00720082', tag_ary: [0x0072,0x0082], tag_multiple: false, tag_note: ''},
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156
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}
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end
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@@ -24,28 +24,73 @@ require 'spec_helper'
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describe DcmDict::Dictionary::UidDictionary do
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|
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include_examples "Map all source data",
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-
[:uid_value, :uid_name],
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+
[:uid_value, :uid_name, :uid_key, :uid_sym],
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DcmDict::SourceData::UidValuesData,
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DcmDict::Dictionary::TheUidDictionary,
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DcmDict::Dictionary::UidRecord,
|
31
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-
[:uid_value, :uid_name, :uid_type]
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+
[:uid_value, :uid_name, :uid_key, :uid_sym, :uid_type]
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{
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'1.2.3.4.5.6'
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-
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-
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'1.2.3.4.5.6' => { :uid_value => '1.2.3.4.5.6',
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:uid_name => '1.2.3.4.5.6 (Unknown UID)',
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:uid_type => :unknown,
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:uid_key => 'UID_1_2_3_4_5_6',
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:uid_sym => :uid_1_2_3_4_5_6,
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+
},
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'1.2.840.10008.5.1.4.1.1.12.77' => { :uid_value => '1.2.840.10008.5.1.4.1.1.12.77',
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:uid_name
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-
:
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-
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-
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-
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'1.2.840.10008.5.1.4.
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-
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-
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-
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-
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-
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:uid_name => '1.2.840.10008.5.1.4.1.1.12.77 (Retired)',
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:uid_key => 'UID_1_2_840_10008_5_1_4_1_1_12_77',
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+
:uid_sym => :uid_1_2_840_10008_5_1_4_1_1_12_77,
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+
:uid_type => :sop_class
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+
},
|
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+
'1.2.840.10008.5.1.4.1.1.12.77 (Retired)' => { :uid_value => '1.2.840.10008.5.1.4.1.1.12.77',
|
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+
:uid_name => '1.2.840.10008.5.1.4.1.1.12.77 (Retired)',
|
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+
:uid_key => 'UID_1_2_840_10008_5_1_4_1_1_12_77',
|
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+
:uid_sym => :uid_1_2_840_10008_5_1_4_1_1_12_77,
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+
:uid_type => :sop_class
|
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+
},
|
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+
'UID_1_2_840_10008_5_1_4_1_1_12_77' => { :uid_value => '1.2.840.10008.5.1.4.1.1.12.77',
|
53
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+
:uid_name => '1.2.840.10008.5.1.4.1.1.12.77 (Retired)',
|
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+
:uid_key => 'UID_1_2_840_10008_5_1_4_1_1_12_77',
|
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:uid_sym => :uid_1_2_840_10008_5_1_4_1_1_12_77,
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:uid_type => :sop_class
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+
},
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:uid_1_2_840_10008_5_1_4_1_1_12_77 => { :uid_value => '1.2.840.10008.5.1.4.1.1.12.77',
|
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+
:uid_name => '1.2.840.10008.5.1.4.1.1.12.77 (Retired)',
|
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:uid_key => 'UID_1_2_840_10008_5_1_4_1_1_12_77',
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:uid_sym => :uid_1_2_840_10008_5_1_4_1_1_12_77,
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:uid_type => :sop_class
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+
},
|
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'1.2.840.10008.5.1.4.1.1.40' => { :uid_value => '1.2.840.10008.5.1.4.1.1.40',
|
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+
:uid_name => '1.2.840.10008.5.1.4.1.1.40 (Retired)',
|
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:uid_key => 'UID_1_2_840_10008_5_1_4_1_1_40',
|
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:uid_sym => :uid_1_2_840_10008_5_1_4_1_1_40,
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:uid_type => :sop_class
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},
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'1.2.840.10008.5.1.4.39.3' => { :uid_value => '1.2.840.10008.5.1.4.39.3',
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:uid_name => 'Color Palette Query/Retrieve Information Model - MOVE',
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:uid_key => 'ColorPaletteQueryRetrieveInformationModelMove',
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:uid_sym => :color_palette_query_retrieve_information_model_move,
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:uid_type => :sop_class
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},
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'Color Palette Query/Retrieve Information Model - MOVE' => { :uid_value => '1.2.840.10008.5.1.4.39.3',
|
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:uid_name => 'Color Palette Query/Retrieve Information Model - MOVE',
|
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:uid_key => 'ColorPaletteQueryRetrieveInformationModelMove',
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:uid_sym => :color_palette_query_retrieve_information_model_move,
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:uid_type => :sop_class
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},
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'ColorPaletteQueryRetrieveInformationModelMove' => { :uid_value => '1.2.840.10008.5.1.4.39.3',
|
83
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:uid_name => 'Color Palette Query/Retrieve Information Model - MOVE',
|
84
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:uid_key => 'ColorPaletteQueryRetrieveInformationModelMove',
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:uid_sym => :color_palette_query_retrieve_information_model_move,
|
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:uid_type => :sop_class
|
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},
|
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:color_palette_query_retrieve_information_model_move => { :uid_value => '1.2.840.10008.5.1.4.39.3',
|
89
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+
:uid_name => 'Color Palette Query/Retrieve Information Model - MOVE',
|
90
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:uid_key => 'ColorPaletteQueryRetrieveInformationModelMove',
|
91
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:uid_sym => :color_palette_query_retrieve_information_model_move,
|
92
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:uid_type => :sop_class
|
93
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+
},
|
49
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|
}.each do |uid, data|
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50
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|
include_examples "Handle specific record", data[:uid_name],
|
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uid, data, DcmDict::Dictionary::TheUidDictionary
|
@@ -55,7 +100,7 @@ describe DcmDict::Dictionary::UidDictionary do
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'1.2.abc.3.4', 'this string is not a valid uid', '1.2.3.04.5'
|
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101
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].each do |uid|
|
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include_examples "Dictionary with wrong key",
|
58
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-
uid, [:uid_value, :uid_name, :uid_type],
|
103
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+
uid, [:uid_value, :uid_name, :uid_type, :uid_key, :uid_sym],
|
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104
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DcmDict::Dictionary::TheUidDictionary
|
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105
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end
|
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@@ -1,5 +1,6 @@
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1
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+
# coding: utf-8
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#
|
2
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-
# Copyright (C) 2014-
|
3
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+
# Copyright (C) 2014-2020 Enrico Rivarola
|
3
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#
|
4
5
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# This file is part of DcmDict gem (dcm_dict).
|
5
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#
|
@@ -27,14 +28,17 @@ describe DcmDict::Dictionary::UidRecord do
|
|
27
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|
[
|
28
29
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{ uid_value: '1.2.840.10008.1.2',
|
29
30
|
uid_name: "Implicit VR Little Endian: Default Transfer Syntax for DICOM",
|
31
|
+
uid_key: "ImplicitVRLittleEndian",
|
32
|
+
uid_sym: :implicit_vr_little_endian,
|
30
33
|
uid_type: :transfer_syntax }
|
31
34
|
].each do |data|
|
32
|
-
it "Handle Data Element Data correctly" do
|
35
|
+
it "Handle Data Element Data correctly (#{data[:uid_name]})" do
|
33
36
|
ur = DcmDict::Dictionary::UidRecord.new(data.dup)
|
34
37
|
expect(ur.uid_value).to eq(data[:uid_value])
|
35
38
|
expect(ur.uid).to eq(data[:uid_value])
|
36
39
|
expect(ur.uid_name).to eq(data[:uid_name])
|
37
40
|
expect(ur.uid_type).to eq(data[:uid_type])
|
41
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+
expect(ur.uid_key).to eq(data[:uid_key])
|
38
42
|
end
|
39
43
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|
40
44
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|
@@ -42,12 +46,12 @@ describe DcmDict::Dictionary::UidRecord do
|
|
42
46
|
DcmDict::Dictionary::UidRecord.new(data),
|
43
47
|
data
|
44
48
|
|
45
|
-
it "data should be not modifiable" do
|
49
|
+
it "data should be not modifiable (#{data[:uid_name]})" do
|
46
50
|
uid = DcmDict::Dictionary::UidRecord.new(data.dup)
|
47
51
|
old_value = uid.uid_value.dup
|
48
52
|
expect{uid.uid_value << 'aaa'}.to raise_error(RuntimeError)
|
49
53
|
expect(uid.uid_value).to eq(old_value)
|
50
54
|
end
|
51
|
-
|
52
55
|
end
|
56
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+
|
53
57
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end
|
@@ -1,5 +1,5 @@
|
|
1
1
|
#
|
2
|
-
# Copyright (C) 2014-
|
2
|
+
# Copyright (C) 2014-2020 Enrico Rivarola
|
3
3
|
#
|
4
4
|
# This file is part of DcmDict gem (dcm_dict).
|
5
5
|
#
|
@@ -92,7 +92,7 @@ END
|
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92
92
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XmlSampleSpecHelper.xml_uid_set.each do |xml_string, data|
|
93
93
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it "for uid sample as #{data[:uid_value].inspect}" do
|
94
94
|
indent = 4
|
95
|
-
src_text = "#{' '*indent}{ uid_value: '#{data[:uid_value]}', uid_name:
|
95
|
+
src_text = "#{' '*indent}{ uid_value: '#{data[:uid_value]}', uid_name: '#{data[:uid_name]}', uid_key: '#{data[:uid_key]}', uid_sym: #{data[:uid_sym].inspect}, uid_type: #{data[:uid_type].inspect}},"
|
96
96
|
src_line = DcmDict::Encoder::DataToCode.uid_data_to_code(data)
|
97
97
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expect(src_line).to eq(src_text)
|
98
98
|
src_line = DcmDict::Encoder::DataToCode.uid_data_to_code(data, indent)
|
@@ -1,5 +1,5 @@
|
|
1
1
|
#
|
2
|
-
# Copyright (C) 2014-
|
2
|
+
# Copyright (C) 2014-2020 Enrico Rivarola
|
3
3
|
#
|
4
4
|
# This file is part of DcmDict gem (dcm_dict).
|
5
5
|
#
|
@@ -26,6 +26,24 @@ require 'spec_helper'
|
|
26
26
|
describe "Hash internal refinement" do
|
27
27
|
using DcmDict::Refine::Internal::HashRefineInternal
|
28
28
|
|
29
|
+
{
|
30
|
+
'1.2.3.4.5.6' => { :uid_value => '1.2.3.4.5.6',
|
31
|
+
:uid_name => '1.2.3.4.5.6 (Unknown UID)',
|
32
|
+
:uid_type => :unknown,
|
33
|
+
:uid_key => 'UID_1_2_3_4_5_6',
|
34
|
+
:uid_sym => :uid_1_2_3_4_5_6,
|
35
|
+
}
|
36
|
+
}.each do |uid_ref, expected_data|
|
37
|
+
it "should check base uid fields for '#{uid_ref}" do
|
38
|
+
data = {uid_value: uid_ref}
|
39
|
+
data.check_base_data_uid_field!
|
40
|
+
expect(data).to eq(expected_data)
|
41
|
+
end
|
42
|
+
|
43
|
+
end
|
44
|
+
|
45
|
+
|
46
|
+
|
29
47
|
it "should check for lowercase tag_ps field" do
|
30
48
|
h = {tag_ps: '(fffe,E000)'}
|
31
49
|
h.check_tag_ps!
|
@@ -1,5 +1,5 @@
|
|
1
1
|
#
|
2
|
-
# Copyright (C) 2014-
|
2
|
+
# Copyright (C) 2014-2020 Enrico Rivarola
|
3
3
|
#
|
4
4
|
# This file is part of DcmDict gem (dcm_dict).
|
5
5
|
#
|
@@ -60,9 +60,9 @@ describe "String refinement" do
|
|
60
60
|
describe "should permit access to single data uid dictionary information" do
|
61
61
|
describe "for regular uids" do
|
62
62
|
[
|
63
|
-
'1.2.840.10008.1.1', "Verification SOP Class",
|
64
|
-
'1.2.840.10008.1.2.1', "Explicit VR Little Endian",
|
65
|
-
'1.2.840.10008.5.1.4.1.2.1.1', "Patient Root Query/Retrieve Information Model - FIND",
|
63
|
+
'1.2.840.10008.1.1', "Verification SOP Class", 'Verification',
|
64
|
+
'1.2.840.10008.1.2.1', "Explicit VR Little Endian", 'ExplicitVRLittleEndian',
|
65
|
+
'1.2.840.10008.5.1.4.1.2.1.1', "Patient Root Query/Retrieve Information Model - FIND", 'PatientRootQueryRetrieveInformationModelFind',
|
66
66
|
'1.2.3.4.5.6'
|
67
67
|
].each do |uid|
|
68
68
|
describe "as #{uid.inspect}" do
|
@@ -1,5 +1,5 @@
|
|
1
1
|
#
|
2
|
-
# Copyright (C) 2014-
|
2
|
+
# Copyright (C) 2014-2020 Enrico Rivarola
|
3
3
|
#
|
4
4
|
# This file is part of DcmDict gem (dcm_dict).
|
5
5
|
#
|
@@ -38,4 +38,29 @@ describe "Symbol refinement" do
|
|
38
38
|
[],
|
39
39
|
Proc.new {|tag| tag.inspect}
|
40
40
|
|
41
|
+
{
|
42
|
+
:uid_1_2_840_10008_5_1_4_1_1_12_77 => { :uid_value => '1.2.840.10008.5.1.4.1.1.12.77',
|
43
|
+
:uid => '1.2.840.10008.5.1.4.1.1.12.77',
|
44
|
+
:uid_name => '1.2.840.10008.5.1.4.1.1.12.77 (Retired)',
|
45
|
+
:uid_key => 'UID_1_2_840_10008_5_1_4_1_1_12_77',
|
46
|
+
:uid_sym => :uid_1_2_840_10008_5_1_4_1_1_12_77,
|
47
|
+
:uid_type => :sop_class
|
48
|
+
},
|
49
|
+
:color_palette_query_retrieve_information_model_move => { :uid_value => '1.2.840.10008.5.1.4.39.3',
|
50
|
+
:uid => '1.2.840.10008.5.1.4.39.3',
|
51
|
+
:uid_name => 'Color Palette Query/Retrieve Information Model - MOVE',
|
52
|
+
:uid_key => 'ColorPaletteQueryRetrieveInformationModelMove',
|
53
|
+
:uid_sym => :color_palette_query_retrieve_information_model_move,
|
54
|
+
:uid_type => :sop_class
|
55
|
+
},
|
56
|
+
}.each do |sym, sym_data|
|
57
|
+
it "for uid as symbol (#{sym.inspect})" do
|
58
|
+
DcmDict::Dictionary::UidMethod.each do |method|
|
59
|
+
expr = "#{sym.inspect}.#{method.to_s}"
|
60
|
+
expected_value = sym_data[method]
|
61
|
+
value = eval(expr)
|
62
|
+
expect(value).to eq(expected_value)
|
63
|
+
end
|
64
|
+
end
|
65
|
+
end
|
41
66
|
end
|