dbd 0.0.6 → 0.0.7
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/HISTORY.txt +5 -0
- data/README.md +49 -40
- data/dbd.gemspec +1 -1
- data/docs/test.rb +48 -39
- data/lib/dbd/fact.rb +19 -4
- data/lib/dbd/graph.rb +1 -1
- data/lib/dbd/time_stamp.rb +13 -2
- data/lib/dbd/version.rb +1 -1
- data/spec/lib/dbd/graph/from_csv_spec.rb +32 -12
- data/spec/lib/dbd/time_stamp/methods_spec.rb +5 -0
- metadata +4 -4
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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---
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SHA1:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 34e70c3c3d08093acee3610c0e3d93ac5bace6b6
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data.tar.gz: 64f2171e686baaa681c3dccef02ef7feb543b71b
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 202ce2b19b1c53a04aa84c0089935baf715f76ed0836d0aaf2259ea930f528592e71ad45f6580679dd1fb5d3174755cbe943092f6c2ac275016294b5908e1920
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data.tar.gz: 64dd10c180cb960f408d3de9be9227c392a2dddc93a6db8c4e0e1baa11345b6591df0a3a227fe3ca79d57366c6cfd584378cddabb1b5a327e0c1baf22955b90a
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data/HISTORY.txt
CHANGED
data/README.md
CHANGED
@@ -48,65 +48,74 @@ Open Source [MIT]
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## Examples
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Also see the file `docs/test.rb
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Also see the file `docs/test.rb` to execute the script below.
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```
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require 'dbd'
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provenance = Dbd::ProvenanceResource.new
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provenance << fact_context_public
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provenance << fact_source_dbd
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provenance << fact_creator_peter_v
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provenance << fact_created_now
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provenance << fact_license_MIT
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provenance << Dbd::ProvenanceFact.new(predicate: "prov:context", object: "public")
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provenance << Dbd::ProvenanceFact.new(predicate: "prov:source", object: "http://github.com/petervandenabeele/dbd")
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provenance << Dbd::ProvenanceFact.new(predicate: "dcterms:creator", object: "@peter_v")
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provenance << Dbd::ProvenanceFact.new(predicate: "dcterms:created", object: Time.now.utc)
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provenance << Dbd::ProvenanceFact.new(predicate: "prov:license", object: "MIT")
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nobel_peace_2012 = Dbd::Resource.new(provenance_subject: provenance.subject)
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nobel_peace_2012 << fact_nobel_peace_2012
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nobel_peace_2012 << fact_EU_label
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nobel_peace_2012 << fact_EU_comment
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nobel_peace_2012 << fact_EU_story
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nobel_peace_2012 << Dbd::Fact.new(predicate: "todo:nobelPeacePriceWinner", object: "2012")
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nobel_peace_2012 << Dbd::Fact.new(predicate: "rdfs:label", object: "EU") # this will use some RDF predicates in future
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nobel_peace_2012 << Dbd::Fact.new(predicate: "rdfs:comment", object: "European Union")
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nobel_peace_2012 << Dbd::Fact.new(predicate: "todo:story", object: "A long period of peace,\n that is a \"bliss\".")
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graph = Dbd::Graph.new
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graph <<
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graph << provenance << nobel_peace_2012
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puts "facts in short representation:"
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puts graph.map(&:short)
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# facts in short representation:
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# [ prov ] :
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# [ prov ] :
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# [ prov ] :
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# [ prov ] :
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# [ prov ] :
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#
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#
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#
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#
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# [ prov ] : 5eb1ea27 : prov:context : public
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# [ prov ] : 5eb1ea27 : prov:source : http://github.com/petervandenabeele/dbd
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# [ prov ] : 5eb1ea27 : dcterms:creator : @peter_v
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# [ prov ] : 5eb1ea27 : dcterms:created : 2013-06-19 22:02:20 UTC
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# [ prov ] : 5eb1ea27 : prov:license : MIT
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# 5eb1ea27 : 3767c493 : todo:nobelPeacePriceWinn : 2012
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# 5eb1ea27 : 3767c493 : rdfs:label : EU
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# 5eb1ea27 : 3767c493 : rdfs:comment : European Union
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# 5eb1ea27 : 3767c493 : todo:story : A long period of peace,_ that is a "bliss".
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csv = graph.to_CSV
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puts "facts in full detail in CSV:"
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puts
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puts csv
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# facts in full detail in CSV:
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# "
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# "
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# "
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# "
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# "
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# "
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# "
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# "
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# "
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#
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# "4720034a-01ea-4b6b-b9aa-45cb8c7c5e64","2013-06-19 22:02:20.489834224 UTC","","5eb1ea27-6691-4a57-ab13-8a59021968e1","prov:context","public"
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# "d05a0a6c-a003-4320-b52b-a6e49e854437","2013-06-19 22:02:20.489889896 UTC","","5eb1ea27-6691-4a57-ab13-8a59021968e1","prov:source","http://github.com/petervandenabeele/dbd"
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# "fc47abbd-da2d-4562-bb6b-ed8b84005734","2013-06-19 22:02:20.489913758 UTC","","5eb1ea27-6691-4a57-ab13-8a59021968e1","dcterms:creator","@peter_v"
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# "f240e975-5d39-41eb-bb5a-cc59ede4c1a6","2013-06-19 22:02:20.489932320 UTC","","5eb1ea27-6691-4a57-ab13-8a59021968e1","dcterms:created","2013-06-19 22:02:20 UTC"
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# "d592b1e8-2910-4329-b502-7d960cebb399","2013-06-19 22:02:20.489950713 UTC","","5eb1ea27-6691-4a57-ab13-8a59021968e1","prov:license","MIT"
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# "a2d55e46-03f2-470e-8347-c36b31e7facc","2013-06-19 22:02:20.489973271 UTC","5eb1ea27-6691-4a57-ab13-8a59021968e1","3767c493-79d3-4a97-a832-79e6361ddc4c","todo:nobelPeacePriceWinner","2012"
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# "0766dd24-70e5-487d-a018-d58da75dcdad","2013-06-19 22:02:20.489996422 UTC","5eb1ea27-6691-4a57-ab13-8a59021968e1","3767c493-79d3-4a97-a832-79e6361ddc4c","rdfs:label","EU"
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# "eda61baa-b331-462e-b7b5-5d6eb2e9a053","2013-06-19 22:02:20.490014676 UTC","5eb1ea27-6691-4a57-ab13-8a59021968e1","3767c493-79d3-4a97-a832-79e6361ddc4c","rdfs:comment","European Union"
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# "a3da9295-b43a-4c3a-8e8c-97c3f04c1fa3","2013-06-19 22:02:20.490036790 UTC","5eb1ea27-6691-4a57-ab13-8a59021968e1","3767c493-79d3-4a97-a832-79e6361ddc4c","todo:story","A long period of peace,
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# that is a ""bliss""."
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imported_graph = Dbd::Graph.from_CSV(csv)
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puts imported_graph.map(&:short)
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# [ prov ] : 5eb1ea27 : prov:context : public
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# [ prov ] : 5eb1ea27 : prov:source : http://github.com/petervandenabeele/dbd
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# [ prov ] : 5eb1ea27 : dcterms:creator : @peter_v
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# [ prov ] : 5eb1ea27 : dcterms:created : 2013-06-19 22:02:20 UTC
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# [ prov ] : 5eb1ea27 : prov:license : MIT
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# 5eb1ea27 : 3767c493 : todo:nobelPeacePriceWinn : 2012
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# 5eb1ea27 : 3767c493 : rdfs:label : EU
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# 5eb1ea27 : 3767c493 : rdfs:comment : European Union
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# 5eb1ea27 : 3767c493 : todo:story : A long period of peace,_ that is a "bliss".
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```
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[RDF]: http://www.w3.org/RDF/
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data/dbd.gemspec
CHANGED
@@ -26,5 +26,5 @@ Gem::Specification.new do |spec|
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spec.add_development_dependency 'yard'
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spec.add_runtime_dependency 'neography'
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spec.add_runtime_dependency 'rdf', '~> 1.0.6'
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spec.add_runtime_dependency 'ruby_peter_v', '>= 0.0.
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spec.add_runtime_dependency 'ruby_peter_v', '>= 0.0.8'
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end
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data/docs/test.rb
CHANGED
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provenance = Dbd::ProvenanceResource.new
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provenance << fact_context_public
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provenance << fact_source_dbd
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provenance << fact_creator_peter_v
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provenance << fact_created_now
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provenance << fact_license_MIT
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provenance << Dbd::ProvenanceFact.new(predicate: "prov:context", object: "public")
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provenance << Dbd::ProvenanceFact.new(predicate: "prov:source", object: "http://github.com/petervandenabeele/dbd")
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provenance << Dbd::ProvenanceFact.new(predicate: "dcterms:creator", object: "@peter_v")
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provenance << Dbd::ProvenanceFact.new(predicate: "dcterms:created", object: Time.now.utc)
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provenance << Dbd::ProvenanceFact.new(predicate: "prov:license", object: "MIT")
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nobel_peace_2012 = Dbd::Resource.new(provenance_subject: provenance.subject)
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nobel_peace_2012 << fact_nobel_peace_2012
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nobel_peace_2012 << fact_EU_label
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nobel_peace_2012 << fact_EU_comment
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nobel_peace_2012 << fact_EU_story
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nobel_peace_2012 << Dbd::Fact.new(predicate: "todo:nobelPeacePriceWinner", object: "2012")
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nobel_peace_2012 << Dbd::Fact.new(predicate: "rdfs:label", object: "EU") # this will use some RDF predicates in future
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nobel_peace_2012 << Dbd::Fact.new(predicate: "rdfs:comment", object: "European Union")
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nobel_peace_2012 << Dbd::Fact.new(predicate: "todo:story", object: "A long period of peace,\n that is a \"bliss\".")
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graph = Dbd::Graph.new
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graph <<
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graph << provenance << nobel_peace_2012
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puts "facts in short representation:"
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puts graph.map(&:short)
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# facts in short representation:
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# [ prov ] :
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# [ prov ] :
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# [ prov ] :
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#
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#
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#
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# [ prov ] : 5eb1ea27 : prov:context : public
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# [ prov ] : 5eb1ea27 : prov:source : http://github.com/petervandenabeele/dbd
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# [ prov ] : 5eb1ea27 : dcterms:creator : @peter_v
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# [ prov ] : 5eb1ea27 : dcterms:created : 2013-06-19 22:02:20 UTC
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# [ prov ] : 5eb1ea27 : prov:license : MIT
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# 5eb1ea27 : 3767c493 : todo:nobelPeacePriceWinn : 2012
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# 5eb1ea27 : 3767c493 : rdfs:label : EU
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# 5eb1ea27 : 3767c493 : rdfs:comment : European Union
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# 5eb1ea27 : 3767c493 : todo:story : A long period of peace,_ that is a "bliss".
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csv = graph.to_CSV
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puts "facts in full detail in CSV:"
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puts
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puts csv
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# facts in full detail in CSV:
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# "
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# "
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# "
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#
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# "4720034a-01ea-4b6b-b9aa-45cb8c7c5e64","2013-06-19 22:02:20.489834224 UTC","","5eb1ea27-6691-4a57-ab13-8a59021968e1","prov:context","public"
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# "d05a0a6c-a003-4320-b52b-a6e49e854437","2013-06-19 22:02:20.489889896 UTC","","5eb1ea27-6691-4a57-ab13-8a59021968e1","prov:source","http://github.com/petervandenabeele/dbd"
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# "fc47abbd-da2d-4562-bb6b-ed8b84005734","2013-06-19 22:02:20.489913758 UTC","","5eb1ea27-6691-4a57-ab13-8a59021968e1","dcterms:creator","@peter_v"
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# "f240e975-5d39-41eb-bb5a-cc59ede4c1a6","2013-06-19 22:02:20.489932320 UTC","","5eb1ea27-6691-4a57-ab13-8a59021968e1","dcterms:created","2013-06-19 22:02:20 UTC"
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# "d592b1e8-2910-4329-b502-7d960cebb399","2013-06-19 22:02:20.489950713 UTC","","5eb1ea27-6691-4a57-ab13-8a59021968e1","prov:license","MIT"
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# "a2d55e46-03f2-470e-8347-c36b31e7facc","2013-06-19 22:02:20.489973271 UTC","5eb1ea27-6691-4a57-ab13-8a59021968e1","3767c493-79d3-4a97-a832-79e6361ddc4c","todo:nobelPeacePriceWinner","2012"
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# "0766dd24-70e5-487d-a018-d58da75dcdad","2013-06-19 22:02:20.489996422 UTC","5eb1ea27-6691-4a57-ab13-8a59021968e1","3767c493-79d3-4a97-a832-79e6361ddc4c","rdfs:label","EU"
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# "eda61baa-b331-462e-b7b5-5d6eb2e9a053","2013-06-19 22:02:20.490014676 UTC","5eb1ea27-6691-4a57-ab13-8a59021968e1","3767c493-79d3-4a97-a832-79e6361ddc4c","rdfs:comment","European Union"
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# "a3da9295-b43a-4c3a-8e8c-97c3f04c1fa3","2013-06-19 22:02:20.490036790 UTC","5eb1ea27-6691-4a57-ab13-8a59021968e1","3767c493-79d3-4a97-a832-79e6361ddc4c","todo:story","A long period of peace,
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# that is a ""bliss""."
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imported_graph = Dbd::Graph.from_CSV(csv)
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puts imported_graph.map(&:short)
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# [ prov ] : 5eb1ea27 : prov:context : public
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# [ prov ] : 5eb1ea27 : prov:source : http://github.com/petervandenabeele/dbd
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# [ prov ] : 5eb1ea27 : dcterms:creator : @peter_v
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# [ prov ] : 5eb1ea27 : dcterms:created : 2013-06-19 22:02:20 UTC
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# [ prov ] : 5eb1ea27 : prov:license : MIT
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# 5eb1ea27 : 3767c493 : todo:nobelPeacePriceWinn : 2012
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# 5eb1ea27 : 3767c493 : rdfs:label : EU
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# 5eb1ea27 : 3767c493 : rdfs:comment : European Union
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# 5eb1ea27 : 3767c493 : todo:story : A long period of peace,_ that is a "bliss".
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data/lib/dbd/fact.rb
CHANGED
@@ -143,13 +143,14 @@ module Dbd
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end
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##
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# Constructs a Fact from a values array
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# Constructs a Fact or ProvenanceFact from a values array
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# (e.g. pulled from a CSV row).
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#
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# @param [Array] values Required : the array with values, organized as in attributes
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# @return [Fact] the constructed fact
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# @return [Fact, ProvenanceFact] the constructed fact
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def self.from_values(values)
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hash = hash_from_values(values)
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fact_from_hash(hash)
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end
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##
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@@ -204,7 +205,7 @@ module Dbd
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end
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##
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# Confirms this is not a ProvenanceFact
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# Confirms this is not a ProvenanceFact.
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#
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|
# Needed for validations that depend on different behavior for
|
210
211
|
# a provenance_fact (mainly, no provenance_subject).
|
@@ -218,5 +219,19 @@ module Dbd
|
|
218
219
|
"#{provenance_subject.to_s[0...8]}"
|
219
220
|
end
|
220
221
|
|
222
|
+
def self.hash_from_values(values)
|
223
|
+
# Do not keep "empty" values (e.g. the provenance_subject for a ProvenanceFact).
|
224
|
+
attributes_values_array = [attributes, values].transpose.select{|a,v| v != ''}
|
225
|
+
Hash[attributes_values_array]
|
226
|
+
end
|
227
|
+
|
228
|
+
def self.fact_from_hash(hash)
|
229
|
+
if hash[:provenance_subject]
|
230
|
+
new(hash)
|
231
|
+
else
|
232
|
+
ProvenanceFact.new(hash)
|
233
|
+
end
|
234
|
+
end
|
235
|
+
|
221
236
|
end
|
222
237
|
end
|
data/lib/dbd/graph.rb
CHANGED
@@ -45,7 +45,7 @@ module Dbd
|
|
45
45
|
# @param [String] csv a string that contains the CSV serialization
|
46
46
|
# @return [Graph] the imported graph
|
47
47
|
def self.from_CSV(csv)
|
48
|
-
|
48
|
+
new.tap do |graph|
|
49
49
|
CSV.new(csv).each do |row|
|
50
50
|
# TODO validate the input formats (e.g. invalid uuid codes)
|
51
51
|
graph << Fact.from_values(row)
|
data/lib/dbd/time_stamp.rb
CHANGED
@@ -81,8 +81,19 @@ module Dbd
|
|
81
81
|
##
|
82
82
|
# with a nanosecond granularity and in UTC
|
83
83
|
def self.from_s(time_string)
|
84
|
-
|
85
|
-
|
84
|
+
# For ns precision in JRuby this extended process is required
|
85
|
+
time_hash = DateTime._strptime(time_string, time_format)
|
86
|
+
raise(
|
87
|
+
ArgumentError,
|
88
|
+
"Time zone must be UTC, was #{time_hash[:zone]}") unless time_hash[:zone] == "UTC"
|
89
|
+
time = Time.utc(time_hash[:year],
|
90
|
+
time_hash[:mon],
|
91
|
+
time_hash[:mday],
|
92
|
+
time_hash[:hour],
|
93
|
+
time_hash[:min],
|
94
|
+
time_hash[:sec],
|
95
|
+
time_hash[:sec_fraction] * 1_000_000)
|
96
|
+
TimeStamp.new(time: time)
|
86
97
|
end
|
87
98
|
|
88
99
|
def >(other)
|
data/lib/dbd/version.rb
CHANGED
@@ -3,26 +3,46 @@ require 'spec_helper'
|
|
3
3
|
module Dbd
|
4
4
|
describe Graph do
|
5
5
|
|
6
|
-
def
|
7
|
-
|
6
|
+
def round_tripped_graph(graph)
|
7
|
+
Graph.from_CSV(StringIO.new(graph.to_CSV))
|
8
8
|
end
|
9
9
|
|
10
10
|
def validate_round_trip(graph)
|
11
|
-
|
12
|
-
|
13
|
-
#
|
14
|
-
|
11
|
+
graph_from_CSV = round_tripped_graph(graph)
|
12
|
+
# temporarily use to_csv as the "identity function" for Graph
|
13
|
+
# TODO define a proper Equality for Graph and Fact
|
14
|
+
graph_from_CSV.to_CSV.should == graph.to_CSV
|
15
15
|
end
|
16
16
|
|
17
17
|
describe "#from_CSV reads back a csv exported graph correctly" do
|
18
|
-
|
19
|
-
|
20
|
-
|
18
|
+
|
19
|
+
describe "for a graph with only provenance_facts" do
|
20
|
+
|
21
|
+
let(:graph) { Factories::Graph.only_provenance }
|
22
|
+
|
23
|
+
it "round_trip validates" do
|
24
|
+
validate_round_trip(graph)
|
25
|
+
end
|
26
|
+
|
27
|
+
it "for a provenance_fact, the provenance_subject must be equal (nil)" do
|
28
|
+
graph_from_CSV = round_tripped_graph(graph)
|
29
|
+
provenance_fact = graph_from_CSV.first
|
30
|
+
provenance_fact.provenance_subject.should be_nil
|
31
|
+
end
|
21
32
|
end
|
22
33
|
|
23
|
-
|
24
|
-
|
25
|
-
|
34
|
+
describe "for a graph with facts and provenance_facts" do
|
35
|
+
|
36
|
+
let(:graph) { Factories::Graph.full }
|
37
|
+
|
38
|
+
it "round_trip validates" do
|
39
|
+
validate_round_trip(graph)
|
40
|
+
end
|
41
|
+
|
42
|
+
it "the short export of a graph is correct after a round trip" do
|
43
|
+
imported_graph = Dbd::Graph.from_CSV(graph.to_CSV)
|
44
|
+
imported_graph.map(&:short).should == (graph.map(&:short))
|
45
|
+
end
|
26
46
|
end
|
27
47
|
end
|
28
48
|
end
|
@@ -32,6 +32,11 @@ module Dbd
|
|
32
32
|
time_stamp = described_class.from_s(a_time_stamp)
|
33
33
|
time_stamp.to_s.should == a_time_stamp
|
34
34
|
end
|
35
|
+
|
36
|
+
it "raises ArgumentError is time_zone is not UTC" do
|
37
|
+
time_CET = a_time_stamp.sub(/UTC/, 'CET')
|
38
|
+
lambda{ described_class.from_s(time_CET) }.should raise_error ArgumentError
|
39
|
+
end
|
35
40
|
end
|
36
41
|
end
|
37
42
|
end
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: dbd
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.0.
|
4
|
+
version: 0.0.7
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Peter Vandenabeele
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2013-06-
|
11
|
+
date: 2013-06-19 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: bundler
|
@@ -128,14 +128,14 @@ dependencies:
|
|
128
128
|
requirements:
|
129
129
|
- - '>='
|
130
130
|
- !ruby/object:Gem::Version
|
131
|
-
version: 0.0.
|
131
|
+
version: 0.0.8
|
132
132
|
type: :runtime
|
133
133
|
prerelease: false
|
134
134
|
version_requirements: !ruby/object:Gem::Requirement
|
135
135
|
requirements:
|
136
136
|
- - '>='
|
137
137
|
- !ruby/object:Gem::Version
|
138
|
-
version: 0.0.
|
138
|
+
version: 0.0.8
|
139
139
|
description: A data store that (almost) never forgets
|
140
140
|
email:
|
141
141
|
- peter@vandenabeele.com
|