dbd 0.0.5 → 0.0.6

data/spec/lib/dbd/provenance_fact/new_spec.rb

@@ -0,0 +1,51 @@
+require 'spec_helper'
+
+module Dbd
+  describe ProvenanceFact do
+
+    let(:subject) { described_class.new_subject }
+    let(:id_class) { described_class.new_id.class }
+
+    let(:provenance_fact_1) do
+      Factories::ProvenanceFact.context(subject)
+    end
+
+    let(:provenance_fact_2) do
+      Factories::ProvenanceFact.created_by(subject)
+    end
+
+    describe "#new" do
+      it "has a unique id (new_id.class)" do
+        provenance_fact_1.id.should be_a(id_class)
+      end
+
+      it "two provenance_facts have different id" do
+        provenance_fact_1.id.should_not == provenance_fact_2.id
+      end
+
+      it "has nil provenance_subject" do
+        provenance_fact_1.provenance_subject.should be_nil
+      end
+
+      it "has correct subject" do
+        provenance_fact_1.subject.should == subject
+      end
+
+      it "has correct predicate" do
+        provenance_fact_1.predicate.should == "https://data.vandenabeele.com/ontologies/provenance#context"
+      end
+
+      it "has correct object" do
+        provenance_fact_1.object.should == "public"
+      end
+
+      it "raises an ProvenanceError when provenance_subject is present in options hash" do
+        lambda { described_class.new(
+          provenance_subject: described_class.new_subject,
+          predicate: "test",
+          object: "test") } .
+            should raise_error ProvenanceError
+      end
+    end
+  end
+end

data/spec/lib/dbd/{provenance_resource_spec.rb → provenance_resource/provenance_resource_spec.rb}

@@ -15,14 +15,15 @@ module Dbd
 
       describe "with a subject argument" do
         it "has stored the resource_subject" do
-          described_class.new(subject: provenance_resource_subject).subject.should == provenance_resource_subject
+          described_class.new(subject: provenance_resource_subject).subject.
+            should == provenance_resource_subject
         end
       end
 
       describe "with a provenance_subject argument" do
         it "raises an ProvenanceError" do
           lambda{ described_class.new(provenance_subject: provenance_resource_subject) }.
-            should raise_error(ProvenanceError)
+            should raise_error(ArgumentError)
         end
       end
     end
@@ -46,13 +47,13 @@ module Dbd
       let(:provenance_fact_context_with_correct_subject) { Factories::ProvenanceFact.context(provenance_resource_subject) }
       let(:fact_1) { Factories::Fact.fact_1(provenance_resource_subject) }
 
-      describe "data facts" do
+      describe "adding provenance facts with << " do
         it "with correct subject it works" do
           provenance_resource << provenance_fact_context_with_correct_subject
           provenance_resource.first.subject.should == provenance_resource_subject
         end
 
-        it "with incorrect subject it raises SubjectError" do
+        it "with incorrect subject it raises SetOnceError" do
           lambda{ provenance_resource << provenance_fact_context_with_incorrect_subject }.
             should raise_error(RubyPeterV::SetOnceError),
               "Value of subject was #{provenance_fact_context_with_incorrect_subject.subject}, " \
@@ -64,15 +65,10 @@ module Dbd
           provenance_resource.first.subject.should == provenance_resource_subject
         end
 
-        it "with nil (=correct) provenance_subject" do
+        it "with nil (=correct) provenance_subject it is a noop" do
           provenance_resource << provenance_fact_context
           provenance_resource.first.provenance_subject.should be_nil
         end
-
-        it "with incorrect provenance_subject it raises ProvenanceError" do
-          lambda{ provenance_resource << fact_1 }.
-            should raise_error ProvenanceError
-        end
       end
     end
   end

data/spec/lib/dbd/{resource_spec.rb → resource/collection_spec.rb}

@@ -5,46 +5,10 @@ module Dbd
 
     let(:provenance_subject) { Factories::ProvenanceResource.provenance_resource.subject }
 
-    let(:resource) do
-      described_class.new(provenance_subject: provenance_subject)
-    end
+    let(:resource) { described_class.new(provenance_subject: provenance_subject) }
 
     let(:resource_subject) { resource.subject }
 
-    describe ".new_subject" do
-      it "returns a Fact#new_subject" do
-        described_class.new_subject.should be_a(Fact.new_subject.class)
-      end
-    end
-
-    describe ".new" do
-      describe "with a provenance_subject argument" do
-        it "has created a subject" do
-          resource.subject.should be_a(described_class.new_subject.class)
-        end
-
-        it "has stored the provenance_subject" do
-          resource.provenance_subject.should == provenance_subject
-        end
-      end
-
-      describe "with an explicit subject argument" do
-        it "has stored the given subject" do
-          explicit_subject = described_class.new_subject
-          described_class.new(
-            subject: explicit_subject,
-            provenance_subject: provenance_subject).subject.should == explicit_subject
-        end
-      end
-
-      describe "with a nil provenance_subject argument" do
-        it "raises a ProvenanceError" do
-          lambda { described_class.new(provenance_subject: nil) } .
-            should raise_error ProvenanceError
-        end
-      end
-    end
-
     describe "the fact collection" do
 
       let(:fact_2_with_subject) { Factories::Fact.fact_2_with_subject }
@@ -68,6 +32,12 @@ module Dbd
           resource.size.should == 2
         end
 
+        it "complains if a provenance_subject is added" do
+          lambda{ resource << provenance_fact_context }.should raise_error(
+            ArgumentError,
+            "Trying to add a ProvenanceFact to a Resource.")
+         end
+
         describe "checks and sets subject :" do
           describe "adding a fact with subject :" do
             describe "when the subject of the fact is equal to the resource_subject" do
@@ -138,9 +108,7 @@ module Dbd
               resource << fact_with_resource_subject
             end
 
-            let(:fact_in_resource) do
-              resource.single
-            end
+            let(:fact_in_resource) { resource.single }
 
             it "inserts the same instance" do
               fact_in_resource.should be_equal(fact_with_resource_subject)
@@ -150,15 +118,8 @@ module Dbd
              fact_in_resource.provenance_subject.should == provenance_subject
             end
           end
-
         end
       end
     end
-
-    describe "Factories::Resource" do
-      it ".facts_resource works" do
-        Factories::Resource.facts_resource(provenance_subject)
-      end
-    end
   end
 end

data/spec/lib/dbd/resource/factory_spec.rb

@@ -0,0 +1,14 @@
+require 'spec_helper'
+
+module Dbd
+  describe Resource do
+
+    let(:provenance_subject) { Factories::ProvenanceResource.provenance_resource.subject }
+
+    describe "Factories::Resource" do
+      it ".facts_resource works" do
+        Factories::Resource.facts_resource(provenance_subject)
+      end
+    end
+  end
+end

data/spec/lib/dbd/resource/new_spec.rb

@@ -0,0 +1,44 @@
+require 'spec_helper'
+
+module Dbd
+  describe Resource do
+
+    let(:provenance_subject) { Factories::ProvenanceResource.provenance_resource.subject }
+
+    let(:resource) { described_class.new(provenance_subject: provenance_subject) }
+
+    describe ".new_subject" do
+      it "returns a Fact#new_subject" do
+        described_class.new_subject.should be_a(Fact.new_subject.class)
+      end
+    end
+
+    describe ".new" do
+      describe "with a provenance_subject argument" do
+        it "has created a subject" do
+          resource.subject.should be_a(described_class.new_subject.class)
+        end
+
+        it "has stored the provenance_subject" do
+          resource.provenance_subject.should == provenance_subject
+        end
+      end
+
+      describe "with an explicit subject argument" do
+        it "has stored the given subject" do
+          explicit_subject = described_class.new_subject
+          described_class.new(
+            subject: explicit_subject,
+            provenance_subject: provenance_subject).subject.should == explicit_subject
+        end
+      end
+
+      describe "with a nil provenance_subject argument" do
+        it "raises a ProvenanceError" do
+          lambda { described_class.new(provenance_subject: nil) } .
+            should raise_error ProvenanceError
+        end
+      end
+    end
+  end
+end

data/spec/lib/dbd/time_stamp/comparisons_spec.rb

@@ -0,0 +1,64 @@
+require 'spec_helper'
+
+module Dbd
+  describe TimeStamp do
+
+    let(:time_stamp_0) { described_class.new(time: Time.new(2013,5,18,12,0,0)) }
+    let(:time_stamp_1) { described_class.new(time: Time.new(2013,5,18,12,0,0)) }
+    let(:time_stamp_2) { described_class.new(time: Time.new(2013,5,18,12,0,1)) }
+
+    describe "==" do
+      it "should be ==" do
+        time_stamp_0.should == time_stamp_1
+      end
+
+      it "hash should also be equal" do
+        time_stamp_0.hash.should == time_stamp_1.hash
+      end
+    end
+
+    describe ">" do
+      it "is true if time_stamp is really larger" do
+        time_stamp_2.should > time_stamp_1
+      end
+    end
+
+    describe "<" do
+      it "is true if time_stamp is really smaller" do
+        time_stamp_1.should < time_stamp_2
+      end
+    end
+
+    describe ">=" do
+      it "is true if time_stamp_2 is really larger" do
+        time_stamp_2.should >= time_stamp_1
+      end
+    end
+
+    describe "<=" do
+      it "is true if time_stamp_1 is really smaller" do
+        time_stamp_1.should <= time_stamp_2
+      end
+    end
+
+    describe "+" do
+      it "returns a larger time_stamp" do
+        (subject + 1).should > subject
+      end
+
+      it "sees a difference of 1 nanosecond" do
+        (subject + Rational('1/1000_000_000')).should > subject
+      end
+    end
+
+    describe "-" do
+      it "returns the time difference" do
+        ((subject + 1) - subject).should == 1
+      end
+
+      it "sees a difference of 1 nanosecond" do
+        ((subject + Rational('1/1000_000_000')) - subject).should == Rational('1/1_000_000_000')
+      end
+    end
+  end
+end

data/spec/lib/dbd/time_stamp/factory_spec.rb

@@ -0,0 +1,17 @@
+require 'spec_helper'
+
+module Dbd
+  describe TimeStamp do
+    let(:fixed_time_stamp) { Factories::TimeStamp.fixed_time_stamp }
+
+    describe "factory works" do
+      it "is a TimeStamp" do
+        fixed_time_stamp.should be_a(TimeStamp)
+      end
+
+      it "has an exact time" do
+        fixed_time_stamp.to_s.should == "2013-06-17 21:55:09.967653012 UTC"
+      end
+    end
+  end
+end

data/spec/lib/dbd/time_stamp/methods_spec.rb

@@ -0,0 +1,37 @@
+require 'spec_helper'
+
+module Dbd
+  describe TimeStamp do
+
+    let(:a_time_stamp) { "2013-05-16 23:52:38.123456789 UTC" }
+
+    describe ".time_format_regexp" do
+      it "matches an example string" do
+        a_time_stamp.should match(described_class.to_s_regexp)
+      end
+    end
+
+    describe "#time to allow comparison" do
+      it "responds with a time" do
+        described_class.new.time.should be_a(Time)
+      end
+    end
+
+    describe "#to_s" do
+      it "returns a Time format string" do
+        subject.to_s.should match(described_class.to_s_regexp)
+      end
+    end
+
+    describe ".from_s" do
+      it "returns a TimeStamp" do
+        described_class.from_s(a_time_stamp).should be_a(described_class)
+      end
+
+      it "round trips with to_s" do
+        time_stamp = described_class.from_s(a_time_stamp)
+        time_stamp.to_s.should == a_time_stamp
+      end
+    end
+ end
+end

data/spec/lib/dbd/time_stamp/new_spec.rb

@@ -0,0 +1,38 @@
+require 'spec_helper'
+
+module Dbd
+  describe TimeStamp do
+    describe ".new" do
+
+      let(:time) { Time.now.utc }
+
+      before(:each) do
+        time
+        Time.stub(:now).and_return(time)
+      end
+
+      it "creates a new (random) time_stamp" do
+        subject # should_not raise_error
+      end
+
+      it "with :time option, sets that to time" do
+        near_future = time + 100
+        time_stamp = described_class.new(time: near_future)
+        time_stamp.time.should == near_future
+      end
+
+      it "with :larger_than, sets a time that is strictly and slightly larger than this" do
+        larger_than = described_class.new(time: time + Rational('500/1000_000')) # 0.5 ms
+        time_stamp = described_class.new(larger_than: larger_than)
+        time_stamp.time.should > larger_than.time
+        (time_stamp.time - larger_than.time).should < Rational('1/1000_000') # 1 us
+      end
+
+      it "without :larger_than adds some random time to the generated time" do
+        time_stamp = described_class.new
+        time_stamp.time.should > time
+        (time_stamp.time - time).should < Rational('1/1000_000') # 1 us
+      end
+    end
+  end
+end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: dbd
 version: !ruby/object:Gem::Version
-  version: 0.0.5
+  version: 0.0.6
 platform: ruby
 authors:
 - Peter Vandenabeele
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2013-06-03 00:00:00.000000000 Z
+date: 2013-06-17 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: bundler
@@ -128,14 +128,14 @@ dependencies:
     requirements:
     - - '>='
       - !ruby/object:Gem::Version
-        version: 0.0.8
+        version: 0.0.9
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - '>='
       - !ruby/object:Gem::Version
-        version: 0.0.8
+        version: 0.0.9
 description: A data store that (almost) never forgets
 email:
 - peter@vandenabeele.com
@@ -167,6 +167,7 @@ files:
 - docs/stories/010_time_class.txt
 - docs/stories/011_store_resource_in_graph.txt
 - docs/stories/012_provenance_fact_properties_from_provenance_ontology.txt
+- docs/stories/013_read_graph_from_CSV.txt
 - docs/test.rb
 - lib/dbd.rb
 - lib/dbd/errors.rb
@@ -179,7 +180,7 @@ files:
 - lib/dbd/helpers/uuid.rb
 - lib/dbd/provenance_fact.rb
 - lib/dbd/provenance_resource.rb
-- lib/dbd/rdf.rb
+- lib/dbd/rdf_base.rb
 - lib/dbd/repo.rb
 - lib/dbd/repo/neo4j_repo.rb
 - lib/dbd/repo/neo4j_repo/base.rb
@@ -187,24 +188,42 @@ files:
 - lib/dbd/time_stamp.rb
 - lib/dbd/version.rb
 - spec/factories/fact.rb
+- spec/factories/fact/id.rb
+- spec/factories/fact/subject.rb
+- spec/factories/graph.rb
 - spec/factories/provenance_fact.rb
 - spec/factories/provenance_resource.rb
 - spec/factories/resource.rb
-- spec/lib/dbd/fact/collection_spec.rb
-- spec/lib/dbd/fact/id_spec.rb
-- spec/lib/dbd/fact/subject_spec.rb
-- spec/lib/dbd/fact_spec.rb
-- spec/lib/dbd/graph_spec.rb
-- spec/lib/dbd/helpers/ordered_set_collection_spec.rb
-- spec/lib/dbd/helpers/uuid_spec.rb
+- spec/factories/time_stamp.rb
+- spec/lib/dbd/fact/collection/collection_spec.rb
+- spec/lib/dbd/fact/factory_spec.rb
+- spec/lib/dbd/fact/id/factory_spec.rb
+- spec/lib/dbd/fact/id/id_spec.rb
+- spec/lib/dbd/fact/methods_spec.rb
+- spec/lib/dbd/fact/new_spec.rb
+- spec/lib/dbd/fact/subject/factory_spec.rb
+- spec/lib/dbd/fact/subject/subject_spec.rb
+- spec/lib/dbd/graph/add_to_graph_spec.rb
+- spec/lib/dbd/graph/factory_spec.rb
+- spec/lib/dbd/graph/from_csv_spec.rb
+- spec/lib/dbd/graph/to_csv_spec.rb
+- spec/lib/dbd/helpers/ordered_set_collection/ordered_set_collection_spec.rb
+- spec/lib/dbd/helpers/uuid/uuid_spec.rb
 - spec/lib/dbd/performance_spec.rb
-- spec/lib/dbd/provenance_fact_spec.rb
-- spec/lib/dbd/provenance_resource_spec.rb
-- spec/lib/dbd/rdf_base_spec.rb
+- spec/lib/dbd/provenance_fact/factory_spec.rb
+- spec/lib/dbd/provenance_fact/methods_spec.rb
+- spec/lib/dbd/provenance_fact/new_spec.rb
+- spec/lib/dbd/provenance_resource/provenance_resource_spec.rb
+- spec/lib/dbd/rdf_base/rdf_base_spec.rb
 - spec/lib/dbd/repo/neo4j_repo/base_spec.rb
 - spec/lib/dbd/repo/neo4j_repo/performance_spec.rb
-- spec/lib/dbd/resource_spec.rb
-- spec/lib/dbd/time_stamp_spec.rb
+- spec/lib/dbd/resource/collection_spec.rb
+- spec/lib/dbd/resource/factory_spec.rb
+- spec/lib/dbd/resource/new_spec.rb
+- spec/lib/dbd/time_stamp/comparisons_spec.rb
+- spec/lib/dbd/time_stamp/factory_spec.rb
+- spec/lib/dbd/time_stamp/methods_spec.rb
+- spec/lib/dbd/time_stamp/new_spec.rb
 - spec/spec_helper.rb
 homepage: ''
 licenses:
@@ -232,23 +251,41 @@ specification_version: 4
 summary: A data store that (almost) never forgets
 test_files:
 - spec/factories/fact.rb
+- spec/factories/fact/id.rb
+- spec/factories/fact/subject.rb
+- spec/factories/graph.rb
 - spec/factories/provenance_fact.rb
 - spec/factories/provenance_resource.rb
 - spec/factories/resource.rb
-- spec/lib/dbd/fact/collection_spec.rb
-- spec/lib/dbd/fact/id_spec.rb
-- spec/lib/dbd/fact/subject_spec.rb
-- spec/lib/dbd/fact_spec.rb
-- spec/lib/dbd/graph_spec.rb
-- spec/lib/dbd/helpers/ordered_set_collection_spec.rb
-- spec/lib/dbd/helpers/uuid_spec.rb
+- spec/factories/time_stamp.rb
+- spec/lib/dbd/fact/collection/collection_spec.rb
+- spec/lib/dbd/fact/factory_spec.rb
+- spec/lib/dbd/fact/id/factory_spec.rb
+- spec/lib/dbd/fact/id/id_spec.rb
+- spec/lib/dbd/fact/methods_spec.rb
+- spec/lib/dbd/fact/new_spec.rb
+- spec/lib/dbd/fact/subject/factory_spec.rb
+- spec/lib/dbd/fact/subject/subject_spec.rb
+- spec/lib/dbd/graph/add_to_graph_spec.rb
+- spec/lib/dbd/graph/factory_spec.rb
+- spec/lib/dbd/graph/from_csv_spec.rb
+- spec/lib/dbd/graph/to_csv_spec.rb
+- spec/lib/dbd/helpers/ordered_set_collection/ordered_set_collection_spec.rb
+- spec/lib/dbd/helpers/uuid/uuid_spec.rb
 - spec/lib/dbd/performance_spec.rb
-- spec/lib/dbd/provenance_fact_spec.rb
-- spec/lib/dbd/provenance_resource_spec.rb
-- spec/lib/dbd/rdf_base_spec.rb
+- spec/lib/dbd/provenance_fact/factory_spec.rb
+- spec/lib/dbd/provenance_fact/methods_spec.rb
+- spec/lib/dbd/provenance_fact/new_spec.rb
+- spec/lib/dbd/provenance_resource/provenance_resource_spec.rb
+- spec/lib/dbd/rdf_base/rdf_base_spec.rb
 - spec/lib/dbd/repo/neo4j_repo/base_spec.rb
 - spec/lib/dbd/repo/neo4j_repo/performance_spec.rb
-- spec/lib/dbd/resource_spec.rb
-- spec/lib/dbd/time_stamp_spec.rb
+- spec/lib/dbd/resource/collection_spec.rb
+- spec/lib/dbd/resource/factory_spec.rb
+- spec/lib/dbd/resource/new_spec.rb
+- spec/lib/dbd/time_stamp/comparisons_spec.rb
+- spec/lib/dbd/time_stamp/factory_spec.rb
+- spec/lib/dbd/time_stamp/methods_spec.rb
+- spec/lib/dbd/time_stamp/new_spec.rb
 - spec/spec_helper.rb
 has_rdoc: