davinci_us_drug_formulary_test_kit 0.9.0
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- checksums.yaml +7 -0
- data/LICENSE +201 -0
- data/lib/davinci_us_drug_formulary_test_kit/custom_groups/capability_statement/conformance_support_test.rb +41 -0
- data/lib/davinci_us_drug_formulary_test_kit/custom_groups/capability_statement/fhir_version_test.rb +15 -0
- data/lib/davinci_us_drug_formulary_test_kit/custom_groups/capability_statement/instantiate_test.rb +19 -0
- data/lib/davinci_us_drug_formulary_test_kit/custom_groups/capability_statement/json_support_test.rb +40 -0
- data/lib/davinci_us_drug_formulary_test_kit/custom_groups/capability_statement/profile_support_test.rb +39 -0
- data/lib/davinci_us_drug_formulary_test_kit/custom_groups/v2.0.1/capability_statement_group.rb +78 -0
- data/lib/davinci_us_drug_formulary_test_kit/date_search_validation.rb +121 -0
- data/lib/davinci_us_drug_formulary_test_kit/fhir_resource_navigation.rb +155 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_code_search_test.rb +54 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_drug_tier_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_formulary_include_search_test.rb +40 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_formulary_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_id_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_lastupdated_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_must_support_test.rb +46 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_period_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_pharmacy_benefit_type_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_read_test.rb +26 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_reference_resolution_test.rb +40 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_status_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_subject_include_search_test.rb +40 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_subject_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/basic_validation_test.rb +39 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic/metadata.yml +292 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/basic_group.rb +107 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_coverage_area_search_test.rb +45 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_coverage_type_search_test.rb +45 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_formulary_coverage_search_test.rb +45 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_id_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_identifier_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_lastupdated_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_must_support_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_name_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_period_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_read_test.rb +26 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_status_search_test.rb +53 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_type_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/formulary_validation_test.rb +39 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary/metadata.yml +278 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/formulary_group.rb +104 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location/location_address_city_search_test.rb +44 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location/location_address_postalcode_search_test.rb +44 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location/location_address_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location/location_address_state_search_test.rb +44 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location/location_id_search_test.rb +56 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location/location_lastupdated_search_test.rb +44 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location/location_must_support_test.rb +37 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location/location_read_test.rb +26 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location/location_validation_test.rb +39 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location/metadata.yml +177 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/location_group.rb +92 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge/medication_knowledge_code_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge/medication_knowledge_doseform_search_test.rb +45 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge/medication_knowledge_drug_name_search_test.rb +44 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge/medication_knowledge_id_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge/medication_knowledge_lastupdated_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge/medication_knowledge_must_support_test.rb +47 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge/medication_knowledge_read_test.rb +26 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge/medication_knowledge_status_search_test.rb +53 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge/medication_knowledge_validation_test.rb +39 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge/metadata.yml +214 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/medication_knowledge_group.rb +91 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/metadata.yml +1192 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/metadata.yml +371 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_coverage_area_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_coverage_type_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_formulary_coverage_include_search_test.rb +40 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_formulary_coverage_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_id_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_identifier_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_lastupdated_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_must_support_test.rb +66 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_name_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_period_search_test.rb +42 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_read_test.rb +26 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_reference_resolution_test.rb +40 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_status_search_test.rb +53 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_type_search_test.rb +43 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan/payer_insurance_plan_validation_test.rb +39 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/payer_insurance_plan_group.rb +108 -0
- data/lib/davinci_us_drug_formulary_test_kit/generated/v2.0.1/usdf_test_suite.rb +114 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/group_generator.rb +181 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/group_metadata.rb +79 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/group_metadata_extractor.rb +329 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/ig_loader.rb +77 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/ig_metadata.rb +33 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/ig_metadata_extractor.rb +40 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/ig_resources.rb +60 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/include_search_test_generator.rb +68 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/must_support_metadata_extractor.rb +384 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/must_support_test_generator.rb +117 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/naming.rb +28 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/read_test_generator.rb +92 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/reference_resolution_test_generator.rb +91 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/search_definition_metadata_extractor.rb +187 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/search_metadata_extractor.rb +59 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/search_test_generator.rb +270 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/suite_generator.rb +94 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/terminology_binding_metadata_extractor.rb +116 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/validation_test_generator.rb +102 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator/value_extractor.rb +113 -0
- data/lib/davinci_us_drug_formulary_test_kit/generator.rb +94 -0
- data/lib/davinci_us_drug_formulary_test_kit/igs/package/r4_search-parameters.json +65408 -0
- data/lib/davinci_us_drug_formulary_test_kit/igs/package.tgz +0 -0
- data/lib/davinci_us_drug_formulary_test_kit/must_support_test.rb +224 -0
- data/lib/davinci_us_drug_formulary_test_kit/read_test.rb +62 -0
- data/lib/davinci_us_drug_formulary_test_kit/reference_resolution_test.rb +174 -0
- data/lib/davinci_us_drug_formulary_test_kit/request_logger.rb +46 -0
- data/lib/davinci_us_drug_formulary_test_kit/search_test.rb +767 -0
- data/lib/davinci_us_drug_formulary_test_kit/search_test_properties.rb +58 -0
- data/lib/davinci_us_drug_formulary_test_kit/validation_test.rb +56 -0
- data/lib/davinci_us_drug_formulary_test_kit/version.rb +5 -0
- data/lib/davinci_us_drug_formulary_test_kit.rb +1 -0
- metadata +245 -0
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require_relative 'date_search_validation'
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require_relative 'fhir_resource_navigation'
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require_relative 'search_test_properties'
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module DaVinciUSDrugFormularyTestKit
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module SearchTest
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extend Forwardable
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include DateSearchValidation
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include FHIRResourceNavigation
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def_delegators 'self.class', :metadata, :provenance_metadata, :properties
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def_delegators 'properties',
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:resource_type,
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:search_param_names,
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:include_param,
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:saves_delayed_references?,
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:first_search?,
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:fixed_value_search?,
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:test_post_search?,
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:token_search_params,
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:test_reference_variants?,
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:params_with_comparators,
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:multiple_or_search_params
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def all_search_params
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param_values = if resource_type == 'Location' && first_search?
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resource_id_list
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else
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resource_status
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end
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@all_search_params ||=
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param_values.each_with_object({}) do |value, params|
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params[value] ||= []
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new_params =
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if fixed_value_search?
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fixed_value_search_param_values.map { |fixed_value| fixed_value_search_params(fixed_value, value) }
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else
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[search_params_with_values(search_param_names, value)]
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end
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new_params.reject! do |params|
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params.any? { |_key, value| value.blank? }
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end
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params[value].concat(new_params)
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end
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end
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def all_include_search_params
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@all_include_search_params ||=
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search_param_names.each_with_object({}) do |value, params|
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params[value] ||= fixed_value_search_param_values.filter_map do |fixed_value|
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fixed_value_search_params(fixed_value, value).merge('_include' => include_param)
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end
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end
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end
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def any_valid_search_params?(search_params)
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search_params.any? { |_resource_id, params| params.present? }
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end
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def run_search_test
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# TODO: skip if not supported?
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skip_if !any_valid_search_params?(all_search_params), unable_to_resolve_params_message
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resources_returned =
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all_search_params.flat_map do |resource_input, params_list|
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params_list.flat_map { |params| perform_search(params, resource_input) }
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end
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skip_if resources_returned.empty?, no_resources_skip_message
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perform_multiple_or_search_test if multiple_or_search_params.present?
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end
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def run_include_search_test
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any_include_references = false
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all_include_search_params.each_value do |params_list|
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params_list.each do |params|
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fhir_search(resource_type, params:)
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check_search_response
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page_count = 1
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bundle = resource
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until bundle.nil? || page_count == 20
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matched_resources = bundle&.entry&.filter_map do |entry|
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entry&.resource if entry&.search&.mode == 'match' && entry&.resource&.resourceType == resource_type
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end
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included_resources = bundle&.entry&.filter_map { |entry| entry.resource if entry.search&.mode == 'include' }
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# For resources in the bundle with the relevant reference, check the bundle for the referenced resource
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matched_resources&.each do |match|
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search_param_paths(include_param).each do |include_ref_path|
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include_ref = resolve_path(match, include_ref_path).first
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next unless include_ref.present?
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any_include_references = true
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include_ref_id = include_ref.reference_id
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include_target_present = included_resources.any? { |resource| resource.id == include_ref_id }
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assert(include_target_present,
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"#{include_ref.type}/#{include_ref_id} referenced by #{resource_type}/#{match.id} " \
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'was not included in the bundle')
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end
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end
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# Fetch the next bundle page
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next_bundle_link = bundle&.link&.find { |link| link.relation == 'next' }&.url
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break if next_bundle_link.blank?
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reply = fhir_client.raw_read_url(next_bundle_link)
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store_request('outgoing') { reply }
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bundle = fhir_client.parse_reply(FHIR::Bundle, fhir_client.default_format, reply)
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page_count += 1
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end
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end
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end
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skip_if !any_include_references,
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"Could not find any resources with a reference matching the include param #{include_param}"
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end
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def perform_search(params, resource_input)
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fhir_search(resource_type, params:)
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check_search_response
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resources_returned =
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fetch_all_bundled_resources.select { |resource| resource.resourceType == resource_type }
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return [] if resources_returned.blank?
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|
136
|
+
perform_comparator_searches(params, resource_input) if params_with_comparators.present?
|
137
|
+
|
138
|
+
filter_insurance_plan(resources_returned) if resource_type == 'InsurancePlan'
|
139
|
+
|
140
|
+
if first_search?
|
141
|
+
all_scratch_resources.concat(resources_returned).uniq!
|
142
|
+
scratch_resources_for_group(metadata.profile_url).concat(resources_returned).uniq!
|
143
|
+
# scratch_resources_for_group(resource_input).concat(resources_returned).uniq!
|
144
|
+
|
145
|
+
end
|
146
|
+
|
147
|
+
resources_returned.each do |resource|
|
148
|
+
check_resource_against_params(resource, params)
|
149
|
+
end
|
150
|
+
|
151
|
+
save_delayed_references(resources_returned) if saves_delayed_references?
|
152
|
+
|
153
|
+
return resources_returned if all_search_variants_tested?
|
154
|
+
|
155
|
+
perform_post_search(resources_returned, params) if test_post_search?
|
156
|
+
perform_reference_with_type_search(params, resources_returned.count) if test_reference_variants?
|
157
|
+
perform_search_with_system(params, resource_input) if token_search_params.present?
|
158
|
+
|
159
|
+
resources_returned
|
160
|
+
end
|
161
|
+
|
162
|
+
def perform_post_search(get_search_resources, params)
|
163
|
+
fhir_search resource_type, params:, search_method: :post
|
164
|
+
|
165
|
+
check_search_response
|
166
|
+
|
167
|
+
post_search_resources = fetch_all_bundled_resources.select { |resource| resource.resourceType == resource_type }
|
168
|
+
|
169
|
+
filter_insurance_plan(post_search_resources) if resource_type == 'InsurancePlan'
|
170
|
+
|
171
|
+
get_resource_count = get_search_resources.length
|
172
|
+
post_resource_count = post_search_resources.length
|
173
|
+
|
174
|
+
search_variant_test_records[:post_variant] = true
|
175
|
+
|
176
|
+
assert get_resource_count == post_resource_count,
|
177
|
+
'Expected search by POST to return the same results as search by GET, ' \
|
178
|
+
"but GET search returned #{get_resource_count} resources, and POST search " \
|
179
|
+
"returned #{post_resource_count} resources."
|
180
|
+
end
|
181
|
+
|
182
|
+
def filter_insurance_plan(resources)
|
183
|
+
if metadata.profile_name.include?('Formulary')
|
184
|
+
resources.select! { |resource| formulary_insurance_plan? resource }
|
185
|
+
else
|
186
|
+
resources.select! { |resource| payer_insurance_plan? resource }
|
187
|
+
end
|
188
|
+
end
|
189
|
+
|
190
|
+
def formulary_insurance_plan?(resource)
|
191
|
+
resource&.type&.first&.coding&.any? { |coding| drugpol_coding? coding }
|
192
|
+
end
|
193
|
+
|
194
|
+
def payer_insurance_plan?(resource)
|
195
|
+
return false if formulary_insurance_plan? resource
|
196
|
+
|
197
|
+
true
|
198
|
+
end
|
199
|
+
|
200
|
+
def drugpol_coding?(coding)
|
201
|
+
coding&.code == 'DRUGPOL' && coding&.system == 'http://terminology.hl7.org/CodeSystem/v3-ActCode'
|
202
|
+
end
|
203
|
+
|
204
|
+
def search_and_check_response(params, resource_type = self.resource_type)
|
205
|
+
fhir_search(resource_type, params:)
|
206
|
+
|
207
|
+
check_search_response
|
208
|
+
end
|
209
|
+
|
210
|
+
def check_search_response
|
211
|
+
assert_response_status(200)
|
212
|
+
assert_resource_type(:bundle)
|
213
|
+
# NOTE: how do we want to handle validating Bundles?
|
214
|
+
end
|
215
|
+
|
216
|
+
def search_variant_test_records
|
217
|
+
@search_variant_test_records ||= initial_search_variant_test_records
|
218
|
+
end
|
219
|
+
|
220
|
+
def initial_search_variant_test_records
|
221
|
+
{}.tap do |records|
|
222
|
+
records[:post_variant] = false if test_post_search?
|
223
|
+
records[:reference_variants] = false if test_reference_variants?
|
224
|
+
records[:token_variants] = false if token_search_params.present?
|
225
|
+
records[:comparator_searches] = Set.new if params_with_comparators.present?
|
226
|
+
end
|
227
|
+
end
|
228
|
+
|
229
|
+
def all_search_variants_tested?
|
230
|
+
search_variant_test_records.all? { |_variant, tested| tested.present? } &&
|
231
|
+
all_comparator_searches_tested?
|
232
|
+
end
|
233
|
+
|
234
|
+
def all_comparator_searches_tested?
|
235
|
+
return true if params_with_comparators.blank?
|
236
|
+
|
237
|
+
Set.new(params_with_comparators) == search_variant_test_records[:comparator_searches]
|
238
|
+
end
|
239
|
+
|
240
|
+
def date_comparator_value(comparator, date)
|
241
|
+
date = date.start || date.end if date.is_a? FHIR::Period
|
242
|
+
case comparator
|
243
|
+
when 'lt', 'le'
|
244
|
+
comparator + (DateTime.xmlschema(date) + 1).xmlschema
|
245
|
+
when 'gt', 'ge'
|
246
|
+
comparator + (DateTime.xmlschema(date) - 1).xmlschema
|
247
|
+
else
|
248
|
+
# ''
|
249
|
+
raise "Unsupported comparator '#{comparator}'"
|
250
|
+
end
|
251
|
+
end
|
252
|
+
|
253
|
+
def required_comparators(name)
|
254
|
+
metadata
|
255
|
+
.search_definitions
|
256
|
+
.dig(name.to_sym, :comparators)
|
257
|
+
.select { |_comparator, expectation| expectation == 'SHALL' }
|
258
|
+
.keys
|
259
|
+
.map(&:to_s)
|
260
|
+
end
|
261
|
+
|
262
|
+
def perform_comparator_searches(params, _resource_input)
|
263
|
+
params_with_comparators.each do |name|
|
264
|
+
next if search_variant_test_records[:comparator_searches].include? name
|
265
|
+
|
266
|
+
required_comparators(name).each do |comparator|
|
267
|
+
paths = search_param_paths(name).first
|
268
|
+
date_element = find_a_value_at(scratch_resources_for_group(metadata.profile_url), paths)
|
269
|
+
params_with_comparator = params.merge(name => date_comparator_value(comparator, date_element))
|
270
|
+
|
271
|
+
search_and_check_response(params_with_comparator)
|
272
|
+
|
273
|
+
fetch_all_bundled_resources.each do |resource|
|
274
|
+
check_resource_against_params(resource, params_with_comparator) if resource.resourceType == resource_type
|
275
|
+
end
|
276
|
+
end
|
277
|
+
|
278
|
+
search_variant_test_records[:comparator_searches] << name
|
279
|
+
end
|
280
|
+
end
|
281
|
+
|
282
|
+
def perform_reference_with_type_search(params, resource_count)
|
283
|
+
return if resource_count.zero?
|
284
|
+
return if search_variant_test_records[:reference_variants]
|
285
|
+
|
286
|
+
new_search_params = params.each_with_object({}) do |(name, value), new_params|
|
287
|
+
definition = metadata.search_definitions[name.to_sym]
|
288
|
+
if definition[:type] != 'Reference'
|
289
|
+
new_params[name] = value
|
290
|
+
next
|
291
|
+
end
|
292
|
+
|
293
|
+
target_type = metadata.search_definitions[name.to_sym][:target]
|
294
|
+
new_value =
|
295
|
+
if value.start_with?("#{target_type}/")
|
296
|
+
value.delete_prefix("#{target_type}/")
|
297
|
+
else
|
298
|
+
"#{target_type}/#{value}"
|
299
|
+
end
|
300
|
+
new_params[name] = new_value
|
301
|
+
end
|
302
|
+
|
303
|
+
search_and_check_response(new_search_params)
|
304
|
+
|
305
|
+
reference_with_type_resources = fetch_all_bundled_resources.select do |resource|
|
306
|
+
resource.resourceType == resource_type
|
307
|
+
end
|
308
|
+
|
309
|
+
filter_insurance_plan(reference_with_type_resources) if resource_type == 'InsurancePlan'
|
310
|
+
|
311
|
+
new_resource_count = reference_with_type_resources.count
|
312
|
+
|
313
|
+
assert new_resource_count == resource_count,
|
314
|
+
"Expected search by `#{params['patient']}` to to return the same results as searching " \
|
315
|
+
"by `#{new_search_params['patient']}`, but found #{resource_count} resources with " \
|
316
|
+
"`#{params['patient']}` and #{new_resource_count} with `#{new_search_params['patient']}`"
|
317
|
+
|
318
|
+
search_variant_test_records[:reference_variants] = true
|
319
|
+
end
|
320
|
+
|
321
|
+
def perform_search_with_system(params, resource_input)
|
322
|
+
return if search_variant_test_records[:token_variants]
|
323
|
+
|
324
|
+
new_search_params = search_params_with_values(token_search_params, resource_input, include_system: true)
|
325
|
+
return if new_search_params.any? { |_name, value| value.blank? }
|
326
|
+
|
327
|
+
search_params = params.merge(new_search_params)
|
328
|
+
search_and_check_response(search_params)
|
329
|
+
|
330
|
+
resources_returned =
|
331
|
+
fetch_all_bundled_resources
|
332
|
+
.select { |resource| resource.resourceType == resource_type }
|
333
|
+
|
334
|
+
assert resources_returned.present?, 'No resources were returned when searching by `system|code`'
|
335
|
+
|
336
|
+
search_variant_test_records[:token_variants] = true
|
337
|
+
end
|
338
|
+
|
339
|
+
def status_search_param_name
|
340
|
+
@status_search_param_name ||=
|
341
|
+
metadata.search_definitions.keys.find { |key| key.to_s.include? 'status' }
|
342
|
+
end
|
343
|
+
|
344
|
+
def status_search_values
|
345
|
+
default_search_values(status_search_param_name)
|
346
|
+
end
|
347
|
+
|
348
|
+
def default_search_values(param_name)
|
349
|
+
definition = metadata.search_definitions[param_name]
|
350
|
+
return [] if definition.blank?
|
351
|
+
|
352
|
+
definition[:multiple_or] == 'SHALL' ? [definition[:values].join(',')] : Array.wrap(definition[:values])
|
353
|
+
end
|
354
|
+
|
355
|
+
def perform_multiple_or_search_test
|
356
|
+
resolved_one = false
|
357
|
+
|
358
|
+
all_search_params.each_value do |params_list|
|
359
|
+
next unless params_list.present?
|
360
|
+
|
361
|
+
search_params = params_list.first
|
362
|
+
existing_values = {}
|
363
|
+
missing_values = {}
|
364
|
+
|
365
|
+
multiple_or_search_params.each do |param_name|
|
366
|
+
search_value = default_search_values(param_name.to_sym)
|
367
|
+
search_params = search_params.merge(param_name.to_s => search_value)
|
368
|
+
existing_values[param_name.to_sym] =
|
369
|
+
scratch_resources_for_group(metadata.profile_url).map(¶m_name.to_sym).compact.uniq
|
370
|
+
end
|
371
|
+
|
372
|
+
# skip patient without multiple-or values
|
373
|
+
next if existing_values.values.any?(&:empty?)
|
374
|
+
|
375
|
+
resolved_one = true
|
376
|
+
|
377
|
+
search_and_check_response(search_params)
|
378
|
+
|
379
|
+
resources_returned =
|
380
|
+
fetch_all_bundled_resources
|
381
|
+
.select { |resource| resource.resourceType == resource_type }
|
382
|
+
|
383
|
+
multiple_or_search_params.each do |param_name|
|
384
|
+
missing_values[param_name.to_sym] =
|
385
|
+
existing_values[param_name.to_sym] - resources_returned.map(¶m_name.to_sym)
|
386
|
+
end
|
387
|
+
|
388
|
+
missing_value_message = missing_values
|
389
|
+
.reject { |_param_name, missing_value| missing_value.empty? }
|
390
|
+
.map { |param_name, missing_value| "#{missing_value.join(',')} values from #{param_name}" }
|
391
|
+
.join(' and ')
|
392
|
+
|
393
|
+
assert missing_value_message.blank?,
|
394
|
+
"Could not find #{missing_value_message} in any of the resources returned for #{metadata.profile_name}"
|
395
|
+
|
396
|
+
break if resolved_one
|
397
|
+
end
|
398
|
+
end
|
399
|
+
|
400
|
+
def all_scratch_resources
|
401
|
+
scratch_resources[:all] ||= []
|
402
|
+
end
|
403
|
+
|
404
|
+
def scratch_resources_for_group(resource_value)
|
405
|
+
return all_scratch_resources if resource_value.nil?
|
406
|
+
|
407
|
+
scratch_resources[resource_value] ||= []
|
408
|
+
end
|
409
|
+
|
410
|
+
def references_to_save(_resource_type = nil)
|
411
|
+
metadata.delayed_references
|
412
|
+
end
|
413
|
+
|
414
|
+
def fixed_value_search_param_name
|
415
|
+
(search_param_names - ['patient']).first
|
416
|
+
end
|
417
|
+
|
418
|
+
def fixed_value_search_param_values
|
419
|
+
metadata.search_definitions[fixed_value_search_param_name.to_sym][:values]
|
420
|
+
end
|
421
|
+
|
422
|
+
def fixed_value_search_params(value, resource_input)
|
423
|
+
search_param_names.each_with_object({}) do |name, params|
|
424
|
+
params[name] = resource_id_param?(name) ? resource_input : value
|
425
|
+
end
|
426
|
+
end
|
427
|
+
|
428
|
+
def search_params_with_values(search_param_names, input_value, include_system: false)
|
429
|
+
resources = scratch_resources_for_group(metadata.profile_url)
|
430
|
+
|
431
|
+
if resources.empty?
|
432
|
+
return search_param_names.each_with_object({}) do |name, params|
|
433
|
+
# if you get an input value, map that to name {{"_id"=>"StateOfCTLocation"}}
|
434
|
+
value = (input_value if status_param?(name) || resource_id_param?(name))
|
435
|
+
params[name] = value
|
436
|
+
end
|
437
|
+
end
|
438
|
+
resources.each_with_object({}) do |resource, outer_params|
|
439
|
+
results_from_one_resource = search_param_names.each_with_object({}) do |name, params|
|
440
|
+
value = if status_param?(name)
|
441
|
+
input_value
|
442
|
+
else
|
443
|
+
search_param_value(name, resource,
|
444
|
+
include_system:)
|
445
|
+
end
|
446
|
+
params[name] = value
|
447
|
+
end
|
448
|
+
|
449
|
+
outer_params.merge!(results_from_one_resource)
|
450
|
+
|
451
|
+
# stop if all parameter values are found
|
452
|
+
return outer_params if outer_params.all? { |_key, value| value.present? }
|
453
|
+
end
|
454
|
+
end
|
455
|
+
|
456
|
+
def resource_status
|
457
|
+
['active']
|
458
|
+
end
|
459
|
+
|
460
|
+
def resource_id_list
|
461
|
+
return [] unless respond_to? :input_ids
|
462
|
+
|
463
|
+
input_ids.split(',').map(&:strip)
|
464
|
+
# return [] if input_ids.blank? || !respond_to?(input_ids)
|
465
|
+
# send(input_ids).split(',').map(&:strip)
|
466
|
+
end
|
467
|
+
|
468
|
+
def resource_id_param?(name)
|
469
|
+
name == '_id'
|
470
|
+
# name == 'patient' || (name == '_id' && resource_type == 'Patient')
|
471
|
+
end
|
472
|
+
|
473
|
+
def status_param?(name)
|
474
|
+
name == 'status'
|
475
|
+
end
|
476
|
+
|
477
|
+
def search_param_paths(name)
|
478
|
+
paths = metadata.search_definitions[name.to_sym][:paths]
|
479
|
+
paths[0] = 'local_class' if paths.first == 'class'
|
480
|
+
paths.map { |path| path.delete_prefix('Resource.') }
|
481
|
+
end
|
482
|
+
|
483
|
+
def all_search_params_present?(params)
|
484
|
+
params.all? { |_name, value| value.present? }
|
485
|
+
end
|
486
|
+
|
487
|
+
def array_of_codes(array)
|
488
|
+
array.map { |name| "`#{name}`" }.join(', ')
|
489
|
+
end
|
490
|
+
|
491
|
+
def unable_to_resolve_params_message
|
492
|
+
"Could not find values for all search params #{array_of_codes(search_param_names)}"
|
493
|
+
end
|
494
|
+
|
495
|
+
def empty_search_params_message(empty_search_params)
|
496
|
+
"Could not find values for the search parameters #{array_of_codes(empty_search_params.keys)}"
|
497
|
+
end
|
498
|
+
|
499
|
+
def no_resources_skip_message(resource_type = self.resource_type)
|
500
|
+
msg = "No #{resource_type} resources appear to be available"
|
501
|
+
|
502
|
+
if resource_type == 'Device' && implantable_device_codes.present?
|
503
|
+
msg.concat(" with the following Device Type Code filter: #{implantable_device_codes}")
|
504
|
+
end
|
505
|
+
|
506
|
+
"#{msg}. Please use resources with more information"
|
507
|
+
end
|
508
|
+
|
509
|
+
def fetch_all_bundled_resources(
|
510
|
+
reply_handler: nil,
|
511
|
+
max_pages: 20,
|
512
|
+
additional_resource_types: [],
|
513
|
+
resource_type: self.resource_type
|
514
|
+
)
|
515
|
+
page_count = 1
|
516
|
+
resources = []
|
517
|
+
bundle = resource
|
518
|
+
|
519
|
+
until bundle.nil? || page_count == max_pages
|
520
|
+
resources += bundle&.entry&.map { |entry| entry&.resource }
|
521
|
+
next_bundle_link = bundle&.link&.find { |link| link.relation == 'next' }&.url
|
522
|
+
reply_handler&.call(response)
|
523
|
+
|
524
|
+
break if next_bundle_link.blank?
|
525
|
+
|
526
|
+
reply = fhir_client.raw_read_url(next_bundle_link)
|
527
|
+
|
528
|
+
store_request('outgoing') { reply }
|
529
|
+
error_message = cant_resolve_next_bundle_message(next_bundle_link)
|
530
|
+
|
531
|
+
assert_response_status(200)
|
532
|
+
assert_valid_json(reply.body, error_message)
|
533
|
+
|
534
|
+
bundle = fhir_client.parse_reply(FHIR::Bundle, fhir_client.default_format, reply)
|
535
|
+
|
536
|
+
page_count += 1
|
537
|
+
end
|
538
|
+
|
539
|
+
valid_resource_types = [resource_type, 'OperationOutcome'].concat(additional_resource_types)
|
540
|
+
valid_resource_types << 'Medication' if resource_type == 'MedicationRequest'
|
541
|
+
|
542
|
+
invalid_resource_types =
|
543
|
+
resources.reject { |entry| valid_resource_types.include? entry.resourceType }
|
544
|
+
.map(&:resourceType)
|
545
|
+
.uniq
|
546
|
+
|
547
|
+
if invalid_resource_types.any?
|
548
|
+
info "Received resource type(s) #{invalid_resource_types.join(', ')} in search bundle, " \
|
549
|
+
"but only expected resource types #{valid_resource_types.join(', ')}. " \
|
550
|
+
'This is unusual but allowed if the server believes additional resource types are relevant.'
|
551
|
+
end
|
552
|
+
|
553
|
+
resources
|
554
|
+
end
|
555
|
+
|
556
|
+
def cant_resolve_next_bundle_message(link)
|
557
|
+
"Could not resolve next bundle: #{link}"
|
558
|
+
end
|
559
|
+
|
560
|
+
def search_param_value(name, resource, include_system: false)
|
561
|
+
paths = search_param_paths(name)
|
562
|
+
search_value = nil
|
563
|
+
paths.each do |path|
|
564
|
+
element = find_a_value_at(resource, path) { |element| element_has_valid_value?(element, include_system) }
|
565
|
+
search_value =
|
566
|
+
case element
|
567
|
+
when FHIR::Period
|
568
|
+
if element.start.present?
|
569
|
+
"gt#{(DateTime.xmlschema(element.start) - 1).xmlschema}"
|
570
|
+
else
|
571
|
+
end_datetime = get_fhir_datetime_range(element.end)[:end]
|
572
|
+
"lt#{(end_datetime + 1).xmlschema}"
|
573
|
+
end
|
574
|
+
when FHIR::Reference
|
575
|
+
element.reference
|
576
|
+
when FHIR::CodeableConcept
|
577
|
+
if include_system
|
578
|
+
coding =
|
579
|
+
find_a_value_at(element, 'coding') { |coding| coding.code.present? && coding.system.present? }
|
580
|
+
"#{coding.system}|#{coding.code}"
|
581
|
+
else
|
582
|
+
find_a_value_at(element, 'coding.code')
|
583
|
+
end
|
584
|
+
when FHIR::Identifier
|
585
|
+
include_system ? "#{element.system}|#{element.value}" : element.value
|
586
|
+
when FHIR::Coding
|
587
|
+
include_system ? "#{element.system}|#{element.code}" : element.code
|
588
|
+
when FHIR::HumanName
|
589
|
+
element.family || element.given&.first || element.text
|
590
|
+
when FHIR::Address
|
591
|
+
element.text || element.city || element.state || element.postalCode || element.country
|
592
|
+
else
|
593
|
+
if metadata.version != 'v3.1.1' &&
|
594
|
+
metadata.search_definitions[name.to_sym][:type] == 'date' &&
|
595
|
+
params_with_comparators&.include?(name)
|
596
|
+
# convert date search to greath-than comparator search with correct precision
|
597
|
+
# For all date search parameters:
|
598
|
+
# Patient.birthDate does not mandate comparators so cannot be converted
|
599
|
+
# Goal.target-date has day precision
|
600
|
+
# All others have second + time offset precision
|
601
|
+
if /^\d{4}(-\d{2})?$/.match?(element) || # YYYY or YYYY-MM
|
602
|
+
(/^\d{4}-\d{2}-\d{2}$/.match?(element) && resource_type != 'Goal') # YYY-MM-DD AND Resource is NOT Goal
|
603
|
+
"gt#{(DateTime.xmlschema(element) - 1).xmlschema}"
|
604
|
+
else
|
605
|
+
element
|
606
|
+
end
|
607
|
+
else
|
608
|
+
element
|
609
|
+
end
|
610
|
+
end
|
611
|
+
|
612
|
+
break if search_value.present?
|
613
|
+
end
|
614
|
+
|
615
|
+
search_value&.gsub(',', '\\,')
|
616
|
+
end
|
617
|
+
|
618
|
+
def element_has_valid_value?(element, include_system)
|
619
|
+
case element
|
620
|
+
when FHIR::Reference
|
621
|
+
element.reference.present?
|
622
|
+
when FHIR::CodeableConcept
|
623
|
+
if include_system
|
624
|
+
coding =
|
625
|
+
find_a_value_at(element, 'coding') { |coding| coding.code.present? && coding.system.present? }
|
626
|
+
coding.present?
|
627
|
+
else
|
628
|
+
find_a_value_at(element, 'coding.code').present?
|
629
|
+
end
|
630
|
+
when FHIR::Identifier
|
631
|
+
include_system ? element.value.present? && element.system.present? : element.value.present?
|
632
|
+
when FHIR::Coding
|
633
|
+
include_system ? element.code.present? && element.system.present? : element.code.present?
|
634
|
+
when FHIR::HumanName
|
635
|
+
(element.family || element.given&.first || element.text).present?
|
636
|
+
when FHIR::Address
|
637
|
+
(element.text || element.city || element.state || element.postalCode || element.country).present?
|
638
|
+
else
|
639
|
+
true
|
640
|
+
end
|
641
|
+
end
|
642
|
+
|
643
|
+
def save_resource_reference(resource_type, reference)
|
644
|
+
scratch[:references] ||= {}
|
645
|
+
scratch[:references][resource_type] ||= Set.new
|
646
|
+
scratch[:references][resource_type] << reference
|
647
|
+
end
|
648
|
+
|
649
|
+
def save_delayed_references(resources, containing_resource_type = resource_type)
|
650
|
+
resources.each do |resource|
|
651
|
+
references_to_save(containing_resource_type).each do |reference_to_save|
|
652
|
+
resolve_path(resource, reference_to_save[:path])
|
653
|
+
.select { |reference| reference.is_a?(FHIR::Reference) && !reference.contained? }
|
654
|
+
.each do |reference|
|
655
|
+
resource_type = reference.resource_class.name.demodulize
|
656
|
+
need_to_save = reference_to_save[:resources].include?(resource_type)
|
657
|
+
next unless need_to_save
|
658
|
+
|
659
|
+
save_resource_reference(resource_type, reference)
|
660
|
+
end
|
661
|
+
end
|
662
|
+
end
|
663
|
+
end
|
664
|
+
|
665
|
+
#### RESULT CHECKING ####
|
666
|
+
|
667
|
+
def check_resource_against_params(resource, params)
|
668
|
+
params.each do |name, escaped_search_value|
|
669
|
+
# unescape search value
|
670
|
+
search_value = escaped_search_value&.gsub('\\,', ',')
|
671
|
+
paths = search_param_paths(name)
|
672
|
+
match_found = false
|
673
|
+
values_found = []
|
674
|
+
|
675
|
+
paths.each do |path|
|
676
|
+
type = metadata.search_definitions[name.to_sym][:type]
|
677
|
+
values_found =
|
678
|
+
resolve_path(resource, path)
|
679
|
+
.map do |value|
|
680
|
+
if value.is_a? FHIR::Reference
|
681
|
+
value.reference
|
682
|
+
else
|
683
|
+
value
|
684
|
+
end
|
685
|
+
end
|
686
|
+
match_found =
|
687
|
+
case type
|
688
|
+
when 'Period', 'date', 'instant', 'dateTime'
|
689
|
+
values_found.any? { |date| validate_date_search(search_value, date) }
|
690
|
+
when 'HumanName'
|
691
|
+
# When a string search parameter refers to the types HumanName and Address,
|
692
|
+
# the search covers the elements of type string, and does not cover elements such as use and period
|
693
|
+
# https://www.hl7.org/fhir/search.html#string
|
694
|
+
search_value_downcase = search_value.downcase
|
695
|
+
values_found.any? do |name|
|
696
|
+
name&.text&.downcase&.start_with?(search_value_downcase) ||
|
697
|
+
name&.family&.downcase&.start_with?(search_value_downcase) ||
|
698
|
+
name&.given&.any? { |given| given.downcase.start_with?(search_value_downcase) } ||
|
699
|
+
name&.prefix&.any? { |prefix| prefix.downcase.start_with?(search_value_downcase) } ||
|
700
|
+
name&.suffix&.any? { |suffix| suffix.downcase.start_with?(search_value_downcase) }
|
701
|
+
end
|
702
|
+
when 'Address'
|
703
|
+
search_value_downcase = search_value.downcase
|
704
|
+
values_found.any? do |address|
|
705
|
+
address&.text&.downcase&.start_with?(search_value_downcase) ||
|
706
|
+
address&.city&.downcase&.start_with?(search_value_downcase) ||
|
707
|
+
address&.state&.downcase&.start_with?(search_value_downcase) ||
|
708
|
+
address&.postalCode&.downcase&.start_with?(search_value_downcase) ||
|
709
|
+
address&.country&.downcase&.start_with?(search_value_downcase)
|
710
|
+
end
|
711
|
+
when 'CodeableConcept'
|
712
|
+
# FHIR token search (https://www.hl7.org/fhir/search.html#token): "When in doubt, servers SHOULD
|
713
|
+
# treat tokens in a case-insensitive manner, on the grounds that including undesired data has
|
714
|
+
# less safety implications than excluding desired behavior".
|
715
|
+
codings = values_found.flat_map(&:coding)
|
716
|
+
if search_value.include? '|'
|
717
|
+
system = search_value.split('|').first
|
718
|
+
code = search_value.split('|').last
|
719
|
+
codings&.any? { |coding| coding.system == system && coding.code&.casecmp?(code) }
|
720
|
+
else
|
721
|
+
codings&.any? { |coding| coding.code&.casecmp?(search_value) }
|
722
|
+
end
|
723
|
+
when 'Coding'
|
724
|
+
if search_value.include? '|'
|
725
|
+
system = search_value.split('|').first
|
726
|
+
code = search_value.split('|').last
|
727
|
+
values_found.any? { |coding| coding.system == system && coding.code&.casecmp?(code) }
|
728
|
+
else
|
729
|
+
values_found.any? { |coding| coding.code&.casecmp?(search_value) }
|
730
|
+
end
|
731
|
+
when 'Identifier'
|
732
|
+
if search_value.include? '|'
|
733
|
+
values_found.any? { |identifier| "#{identifier.system}|#{identifier.value}" == search_value }
|
734
|
+
else
|
735
|
+
values_found.any? { |identifier| identifier.value == search_value }
|
736
|
+
end
|
737
|
+
when 'string'
|
738
|
+
searched_values = search_value.downcase.split(/(?<!\\\\),/).map { |string| string.gsub('\\,', ',') }
|
739
|
+
values_found.any? do |value_found|
|
740
|
+
searched_values.any? { |searched_value| value_found.downcase.starts_with? searched_value }
|
741
|
+
end
|
742
|
+
else
|
743
|
+
# searching by patient requires special case because we are searching by a resource identifier
|
744
|
+
# references can also be URLs, so we may need to resolve those URLs
|
745
|
+
if ['subject', 'patient'].include? name.to_s
|
746
|
+
id = search_value.split('Patient/').last
|
747
|
+
possible_values = [id, "Patient/#{id}", "#{url}/Patient/#{id}"]
|
748
|
+
values_found.any? do |reference|
|
749
|
+
possible_values.include? reference
|
750
|
+
end
|
751
|
+
else
|
752
|
+
search_values = search_value.split(/(?<!\\\\),/).map { |string| string.gsub('\\,', ',') }
|
753
|
+
values_found.any? { |value_found| search_values.include? value_found }
|
754
|
+
end
|
755
|
+
end
|
756
|
+
|
757
|
+
break if match_found
|
758
|
+
end
|
759
|
+
|
760
|
+
assert match_found,
|
761
|
+
"#{resource_type}/#{resource.id} did not match the search parameters:\n" \
|
762
|
+
"* Expected: #{search_value}\n" \
|
763
|
+
"* Found: #{values_found.map(&:inspect).join(', ')}"
|
764
|
+
end
|
765
|
+
end
|
766
|
+
end
|
767
|
+
end
|