datasketches 0.1.2 → 0.2.3
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- checksums.yaml +4 -4
- data/CHANGELOG.md +17 -0
- data/LICENSE +40 -3
- data/NOTICE +1 -1
- data/ext/datasketches/cpc_wrapper.cpp +12 -13
- data/ext/datasketches/ext.cpp +1 -1
- data/ext/datasketches/ext.h +4 -0
- data/ext/datasketches/extconf.rb +1 -1
- data/ext/datasketches/fi_wrapper.cpp +6 -8
- data/ext/datasketches/hll_wrapper.cpp +13 -14
- data/ext/datasketches/kll_wrapper.cpp +28 -76
- data/ext/datasketches/theta_wrapper.cpp +27 -41
- data/ext/datasketches/vo_wrapper.cpp +4 -6
- data/lib/datasketches/version.rb +1 -1
- data/vendor/datasketches-cpp/CMakeLists.txt +10 -0
- data/vendor/datasketches-cpp/LICENSE +40 -3
- data/vendor/datasketches-cpp/NOTICE +1 -1
- data/vendor/datasketches-cpp/README.md +4 -4
- data/vendor/datasketches-cpp/common/include/MurmurHash3.h +18 -7
- data/vendor/datasketches-cpp/common/include/binomial_bounds.hpp +8 -8
- data/vendor/datasketches-cpp/common/include/bounds_binomial_proportions.hpp +12 -15
- data/vendor/datasketches-cpp/common/include/common_defs.hpp +26 -0
- data/vendor/datasketches-cpp/common/include/conditional_forward.hpp +20 -8
- data/vendor/datasketches-cpp/common/include/count_zeros.hpp +2 -2
- data/vendor/datasketches-cpp/common/include/memory_operations.hpp +12 -0
- data/vendor/datasketches-cpp/common/include/serde.hpp +7 -7
- data/vendor/datasketches-cpp/common/test/CMakeLists.txt +24 -0
- data/vendor/datasketches-cpp/common/test/integration_test.cpp +77 -0
- data/vendor/datasketches-cpp/common/test/test_allocator.hpp +9 -1
- data/vendor/datasketches-cpp/cpc/include/cpc_common.hpp +13 -3
- data/vendor/datasketches-cpp/cpc/include/cpc_compressor.hpp +20 -20
- data/vendor/datasketches-cpp/cpc/include/cpc_compressor_impl.hpp +116 -105
- data/vendor/datasketches-cpp/cpc/include/cpc_sketch.hpp +22 -6
- data/vendor/datasketches-cpp/cpc/include/cpc_sketch_impl.hpp +140 -101
- data/vendor/datasketches-cpp/cpc/include/cpc_union.hpp +2 -2
- data/vendor/datasketches-cpp/cpc/include/cpc_union_impl.hpp +20 -20
- data/vendor/datasketches-cpp/cpc/include/cpc_util.hpp +10 -16
- data/vendor/datasketches-cpp/cpc/include/icon_estimator.hpp +6 -6
- data/vendor/datasketches-cpp/cpc/include/u32_table.hpp +10 -10
- data/vendor/datasketches-cpp/cpc/include/u32_table_impl.hpp +21 -21
- data/vendor/datasketches-cpp/cpc/test/CMakeLists.txt +1 -0
- data/vendor/datasketches-cpp/cpc/test/compression_test.cpp +10 -10
- data/vendor/datasketches-cpp/cpc/test/cpc_sketch_allocation_test.cpp +237 -0
- data/vendor/datasketches-cpp/cpc/test/cpc_sketch_test.cpp +25 -0
- data/vendor/datasketches-cpp/cpc/test/cpc_union_test.cpp +1 -1
- data/vendor/datasketches-cpp/fi/include/frequent_items_sketch.hpp +15 -10
- data/vendor/datasketches-cpp/fi/include/frequent_items_sketch_impl.hpp +102 -105
- data/vendor/datasketches-cpp/fi/include/reverse_purge_hash_map.hpp +19 -13
- data/vendor/datasketches-cpp/fi/include/reverse_purge_hash_map_impl.hpp +141 -125
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_custom_type_test.cpp +15 -12
- data/vendor/datasketches-cpp/fi/test/reverse_purge_hash_map_test.cpp +5 -5
- data/vendor/datasketches-cpp/hll/CMakeLists.txt +3 -0
- data/vendor/datasketches-cpp/hll/include/AuxHashMap-internal.hpp +81 -109
- data/vendor/datasketches-cpp/hll/include/AuxHashMap.hpp +25 -24
- data/vendor/datasketches-cpp/hll/include/CompositeInterpolationXTable-internal.hpp +15 -15
- data/vendor/datasketches-cpp/hll/include/CompositeInterpolationXTable.hpp +5 -5
- data/vendor/datasketches-cpp/hll/include/CouponHashSet-internal.hpp +89 -105
- data/vendor/datasketches-cpp/hll/include/CouponHashSet.hpp +13 -13
- data/vendor/datasketches-cpp/hll/include/CouponList-internal.hpp +130 -165
- data/vendor/datasketches-cpp/hll/include/CouponList.hpp +21 -22
- data/vendor/datasketches-cpp/hll/include/CubicInterpolation-internal.hpp +2 -4
- data/vendor/datasketches-cpp/hll/include/CubicInterpolation.hpp +2 -2
- data/vendor/datasketches-cpp/hll/include/HarmonicNumbers-internal.hpp +1 -1
- data/vendor/datasketches-cpp/hll/include/HarmonicNumbers.hpp +2 -2
- data/vendor/datasketches-cpp/hll/include/Hll4Array-internal.hpp +88 -83
- data/vendor/datasketches-cpp/hll/include/Hll4Array.hpp +9 -9
- data/vendor/datasketches-cpp/hll/include/Hll6Array-internal.hpp +34 -45
- data/vendor/datasketches-cpp/hll/include/Hll6Array.hpp +7 -8
- data/vendor/datasketches-cpp/hll/include/Hll8Array-internal.hpp +41 -52
- data/vendor/datasketches-cpp/hll/include/Hll8Array.hpp +7 -8
- data/vendor/datasketches-cpp/hll/include/HllArray-internal.hpp +220 -251
- data/vendor/datasketches-cpp/hll/include/HllArray.hpp +42 -42
- data/vendor/datasketches-cpp/hll/include/HllSketch-internal.hpp +36 -38
- data/vendor/datasketches-cpp/hll/include/HllSketchImpl-internal.hpp +22 -22
- data/vendor/datasketches-cpp/hll/include/HllSketchImpl.hpp +15 -14
- data/vendor/datasketches-cpp/hll/include/HllSketchImplFactory.hpp +47 -44
- data/vendor/datasketches-cpp/hll/include/HllUnion-internal.hpp +62 -87
- data/vendor/datasketches-cpp/hll/include/HllUtil.hpp +121 -128
- data/vendor/datasketches-cpp/hll/include/RelativeErrorTables.hpp +1 -1
- data/vendor/datasketches-cpp/hll/include/coupon_iterator-internal.hpp +9 -9
- data/vendor/datasketches-cpp/hll/include/coupon_iterator.hpp +5 -5
- data/vendor/datasketches-cpp/hll/include/hll.hpp +25 -53
- data/vendor/datasketches-cpp/hll/test/AuxHashMapTest.cpp +8 -8
- data/vendor/datasketches-cpp/hll/test/CouponHashSetTest.cpp +36 -36
- data/vendor/datasketches-cpp/hll/test/CouponListTest.cpp +28 -28
- data/vendor/datasketches-cpp/hll/test/CrossCountingTest.cpp +2 -2
- data/vendor/datasketches-cpp/hll/test/HllArrayTest.cpp +37 -37
- data/vendor/datasketches-cpp/hll/test/HllSketchTest.cpp +57 -61
- data/vendor/datasketches-cpp/hll/test/HllUnionTest.cpp +10 -14
- data/vendor/datasketches-cpp/hll/test/IsomorphicTest.cpp +3 -3
- data/vendor/datasketches-cpp/hll/test/ToFromByteArrayTest.cpp +4 -4
- data/vendor/datasketches-cpp/kll/include/kll_helper.hpp +5 -4
- data/vendor/datasketches-cpp/kll/include/kll_helper_impl.hpp +6 -6
- data/vendor/datasketches-cpp/kll/include/kll_quantile_calculator.hpp +14 -6
- data/vendor/datasketches-cpp/kll/include/kll_quantile_calculator_impl.hpp +40 -25
- data/vendor/datasketches-cpp/kll/include/kll_sketch.hpp +50 -6
- data/vendor/datasketches-cpp/kll/include/kll_sketch_impl.hpp +164 -136
- data/vendor/datasketches-cpp/kll/include/kolmogorov_smirnov.hpp +67 -0
- data/vendor/datasketches-cpp/kll/include/kolmogorov_smirnov_impl.hpp +78 -0
- data/vendor/datasketches-cpp/kll/test/CMakeLists.txt +1 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_custom_type_test.cpp +11 -10
- data/vendor/datasketches-cpp/kll/test/kll_sketch_test.cpp +178 -88
- data/vendor/datasketches-cpp/kll/test/kolmogorov_smirnov_test.cpp +111 -0
- data/vendor/datasketches-cpp/pyproject.toml +4 -2
- data/vendor/datasketches-cpp/python/CMakeLists.txt +12 -6
- data/vendor/datasketches-cpp/python/README.md +52 -49
- data/vendor/datasketches-cpp/python/pybind11Path.cmd +3 -0
- data/vendor/datasketches-cpp/python/src/cpc_wrapper.cpp +1 -1
- data/vendor/datasketches-cpp/python/src/datasketches.cpp +2 -0
- data/vendor/datasketches-cpp/python/src/hll_wrapper.cpp +4 -6
- data/vendor/datasketches-cpp/python/src/kll_wrapper.cpp +4 -2
- data/vendor/datasketches-cpp/python/src/req_wrapper.cpp +246 -0
- data/vendor/datasketches-cpp/python/src/theta_wrapper.cpp +38 -28
- data/vendor/datasketches-cpp/python/src/vector_of_kll.cpp +11 -5
- data/vendor/datasketches-cpp/python/src/vo_wrapper.cpp +2 -2
- data/vendor/datasketches-cpp/python/tests/hll_test.py +1 -2
- data/vendor/datasketches-cpp/python/tests/kll_test.py +5 -5
- data/vendor/datasketches-cpp/python/tests/req_test.py +126 -0
- data/vendor/datasketches-cpp/python/tests/theta_test.py +28 -3
- data/vendor/datasketches-cpp/python/tests/vector_of_kll_test.py +4 -4
- data/vendor/datasketches-cpp/python/tests/vo_test.py +3 -3
- data/vendor/datasketches-cpp/req/CMakeLists.txt +60 -0
- data/vendor/datasketches-cpp/{tuple/include/theta_a_not_b_experimental_impl.hpp → req/include/req_common.hpp} +18 -8
- data/vendor/datasketches-cpp/req/include/req_compactor.hpp +137 -0
- data/vendor/datasketches-cpp/req/include/req_compactor_impl.hpp +488 -0
- data/vendor/datasketches-cpp/req/include/req_quantile_calculator.hpp +69 -0
- data/vendor/datasketches-cpp/req/include/req_quantile_calculator_impl.hpp +60 -0
- data/vendor/datasketches-cpp/req/include/req_sketch.hpp +395 -0
- data/vendor/datasketches-cpp/req/include/req_sketch_impl.hpp +810 -0
- data/vendor/datasketches-cpp/req/test/CMakeLists.txt +43 -0
- data/vendor/datasketches-cpp/req/test/req_float_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_exact_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_raw_items_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_float_single_item_from_java.sk +0 -0
- data/vendor/datasketches-cpp/req/test/req_sketch_custom_type_test.cpp +128 -0
- data/vendor/datasketches-cpp/req/test/req_sketch_test.cpp +494 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_sketch.hpp +19 -13
- data/vendor/datasketches-cpp/sampling/include/var_opt_sketch_impl.hpp +130 -127
- data/vendor/datasketches-cpp/sampling/include/var_opt_union.hpp +5 -5
- data/vendor/datasketches-cpp/sampling/include/var_opt_union_impl.hpp +41 -49
- data/vendor/datasketches-cpp/sampling/test/CMakeLists.txt +1 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_allocation_test.cpp +96 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_sketch_test.cpp +6 -6
- data/vendor/datasketches-cpp/sampling/test/var_opt_union_test.cpp +13 -44
- data/vendor/datasketches-cpp/setup.py +11 -6
- data/vendor/datasketches-cpp/theta/CMakeLists.txt +30 -3
- data/vendor/datasketches-cpp/{tuple → theta}/include/bounds_on_ratios_in_sampled_sets.hpp +3 -2
- data/vendor/datasketches-cpp/{tuple → theta}/include/bounds_on_ratios_in_theta_sketched_sets.hpp +1 -1
- data/vendor/datasketches-cpp/theta/include/compact_theta_sketch_parser.hpp +67 -0
- data/vendor/datasketches-cpp/theta/include/compact_theta_sketch_parser_impl.hpp +70 -0
- data/vendor/datasketches-cpp/theta/include/theta_a_not_b.hpp +12 -29
- data/vendor/datasketches-cpp/theta/include/theta_a_not_b_impl.hpp +5 -46
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_comparators.hpp +0 -0
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_constants.hpp +11 -4
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_helpers.hpp +0 -0
- data/vendor/datasketches-cpp/theta/include/theta_intersection.hpp +26 -28
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_intersection_base.hpp +0 -0
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_intersection_base_impl.hpp +0 -0
- data/vendor/datasketches-cpp/theta/include/theta_intersection_impl.hpp +8 -90
- data/vendor/datasketches-cpp/{tuple/test/theta_union_experimental_test.cpp → theta/include/theta_jaccard_similarity.hpp} +11 -18
- data/vendor/datasketches-cpp/{tuple/include/jaccard_similarity.hpp → theta/include/theta_jaccard_similarity_base.hpp} +24 -36
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_set_difference_base.hpp +0 -0
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_set_difference_base_impl.hpp +5 -0
- data/vendor/datasketches-cpp/theta/include/theta_sketch.hpp +163 -256
- data/vendor/datasketches-cpp/theta/include/theta_sketch_impl.hpp +250 -651
- data/vendor/datasketches-cpp/theta/include/theta_union.hpp +27 -60
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_union_base.hpp +1 -1
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_union_base_impl.hpp +6 -1
- data/vendor/datasketches-cpp/theta/include/theta_union_impl.hpp +13 -69
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_update_sketch_base.hpp +10 -21
- data/vendor/datasketches-cpp/{tuple → theta}/include/theta_update_sketch_base_impl.hpp +44 -30
- data/vendor/datasketches-cpp/theta/test/CMakeLists.txt +1 -0
- data/vendor/datasketches-cpp/theta/test/theta_a_not_b_test.cpp +23 -1
- data/vendor/datasketches-cpp/theta/test/theta_intersection_test.cpp +21 -1
- data/vendor/datasketches-cpp/{tuple → theta}/test/theta_jaccard_similarity_test.cpp +60 -5
- data/vendor/datasketches-cpp/theta/test/theta_sketch_test.cpp +74 -235
- data/vendor/datasketches-cpp/theta/test/theta_union_test.cpp +22 -2
- data/vendor/datasketches-cpp/tuple/CMakeLists.txt +3 -35
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_sketch_impl.hpp +47 -60
- data/vendor/datasketches-cpp/tuple/include/tuple_jaccard_similarity.hpp +38 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_sketch.hpp +28 -13
- data/vendor/datasketches-cpp/tuple/include/tuple_sketch_impl.hpp +57 -70
- data/vendor/datasketches-cpp/tuple/test/CMakeLists.txt +1 -6
- data/vendor/datasketches-cpp/tuple/test/array_of_doubles_sketch_test.cpp +1 -1
- data/vendor/datasketches-cpp/tuple/test/tuple_a_not_b_test.cpp +18 -21
- data/vendor/datasketches-cpp/tuple/test/tuple_intersection_test.cpp +13 -16
- data/vendor/datasketches-cpp/tuple/test/tuple_jaccard_similarity_test.cpp +7 -6
- data/vendor/datasketches-cpp/tuple/test/tuple_sketch_allocation_test.cpp +3 -3
- data/vendor/datasketches-cpp/tuple/test/tuple_sketch_test.cpp +20 -20
- data/vendor/datasketches-cpp/tuple/test/tuple_union_test.cpp +13 -16
- metadata +51 -36
- data/vendor/datasketches-cpp/tuple/include/theta_a_not_b_experimental.hpp +0 -53
- data/vendor/datasketches-cpp/tuple/include/theta_intersection_experimental.hpp +0 -78
- data/vendor/datasketches-cpp/tuple/include/theta_intersection_experimental_impl.hpp +0 -43
- data/vendor/datasketches-cpp/tuple/include/theta_sketch_experimental.hpp +0 -393
- data/vendor/datasketches-cpp/tuple/include/theta_sketch_experimental_impl.hpp +0 -481
- data/vendor/datasketches-cpp/tuple/include/theta_union_experimental.hpp +0 -88
- data/vendor/datasketches-cpp/tuple/include/theta_union_experimental_impl.hpp +0 -47
- data/vendor/datasketches-cpp/tuple/test/theta_a_not_b_experimental_test.cpp +0 -250
- data/vendor/datasketches-cpp/tuple/test/theta_compact_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/theta_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/theta_compact_single_item_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/theta_intersection_experimental_test.cpp +0 -224
- data/vendor/datasketches-cpp/tuple/test/theta_sketch_experimental_test.cpp +0 -247
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ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
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=============================================================
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BSD License
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=============================================================
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Original source code:
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Copyright (c) 2016 Wenzel Jakob <wenzel.jakob@epfl.ch>, All rights reserved.
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this list of conditions and the following disclaimer in the documentation
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without specific prior written permission.
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THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
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DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
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SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
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CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
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OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
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OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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Public Domain
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# DataSketches Core C++ Library Component
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This is the core C++ component of the DataSketches library. It contains all of the key sketching algorithms that are in the Java component and can be accessed directly from user applications.
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# Apache DataSketches Core C++ Library Component
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This is the core C++ component of the Apache DataSketches library. It contains all of the key sketching algorithms that are in the Java component and can be accessed directly from user applications.
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This component is also a dependency of other components of the library that create adaptors for target systems, such as PostgreSQL.
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Note that we have a parallel core component for Java implementations of the same sketch algorithms,
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[datasketches-java](https://github.com/apache/datasketches-java).
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Please visit the main [DataSketches website](https://datasketches.apache.org) for more information.
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Please visit the main [Apache DataSketches website](https://datasketches.apache.org) for more information.
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If you are interested in making contributions to this site please see our [Community](https://datasketches.apache.org/docs/Community/) page for how to contact us.
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---
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This code requires C++11.
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This code requires C++11.
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This includes Python bindings. For the Python interface, see the README notes in [the python subdirectory](https://github.com/apache/datasketches-cpp/tree/master/python).
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// * Changed input seed in MurmurHash3_x64_128 to uint64_t
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// * Define and use HashState reference to return result
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// * Made entire hash function defined inline
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// * Added compute_seed_hash
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//-----------------------------------------------------------------------------
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// MurmurHash3 was written by Austin Appleby, and is placed in the public
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// domain. The author hereby disclaims copyright to this source code.
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#ifndef _MURMURHASH3_H_
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#define _MURMURHASH3_H_
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#include <cstring>
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//-----------------------------------------------------------------------------
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// Platform-specific functions and macros
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@@ -75,9 +78,11 @@ typedef struct {
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// Block read - if your platform needs to do endian-swapping or can only
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// handle aligned reads, do the conversion here
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FORCE_INLINE uint64_t getblock64 ( const uint64_t * p,
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FORCE_INLINE uint64_t getblock64 ( const uint64_t * p, size_t i )
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{
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uint64_t res;
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memcpy(&res, p + i, sizeof(res));
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return res;
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}
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//-----------------------------------------------------------------------------
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return k;
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}
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FORCE_INLINE void MurmurHash3_x64_128(const void* key,
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FORCE_INLINE void MurmurHash3_x64_128(const void* key, size_t lenBytes, uint64_t seed, HashState& out) {
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static const uint64_t c1 = BIG_CONSTANT(0x87c37b91114253d5);
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static const uint64_t c2 = BIG_CONSTANT(0x4cf5ad432745937f);
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// Number of full 128-bit blocks of 16 bytes.
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// Possible exclusion of a remainder of up to 15 bytes.
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const
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const size_t nblocks = lenBytes >> 4; // bytes / 16
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// Process the 128-bit blocks (the body) into the hash
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const uint64_t* blocks = (const uint64_t*)(data);
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for (
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uint64_t k1 = getblock64(blocks,i*2+0);
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uint64_t k2 = getblock64(blocks,i*2+1);
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for (size_t i = 0; i < nblocks; ++i) { // 16 bytes per block
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uint64_t k1 = getblock64(blocks, i * 2 + 0);
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uint64_t k2 = getblock64(blocks, i * 2 + 1);
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k1 *= c1; k1 = ROTL64(k1,31); k1 *= c2; out.h1 ^= k1;
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out.h1 = ROTL64(out.h1,27);
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//-----------------------------------------------------------------------------
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FORCE_INLINE uint16_t compute_seed_hash(uint64_t seed) {
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HashState hashes;
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MurmurHash3_x64_128(&seed, sizeof(seed), 0, hashes);
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return static_cast<uint16_t>(hashes.h1 & 0xffff);
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}
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#endif // _MURMURHASH3_H_
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// The following computes an approximation to the lower bound of a Frequentist
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// confidence interval based on the tails of the Binomial distribution.
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static double compute_approx_binomial_lower_bound(unsigned long long num_samples, double theta, unsigned num_std_devs) {
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if (theta == 1) return num_samples;
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if (theta == 1) return static_cast<double>(num_samples);
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if (num_samples == 0) return 0;
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if (num_samples == 1) {
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const double delta = delta_of_num_std_devs[num_std_devs];
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}
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// at this point we know 2 <= num_samples <= 120
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if (theta > (1 - 1e-5)) { // empirically-determined threshold
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return num_samples;
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return static_cast<double>(num_samples);
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}
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if (theta < (num_samples / 360.0)) { // empirically-determined threshold
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// here we use the Gaussian approximation, but with a modified num_std_devs
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const unsigned index = 3 * num_samples + (num_std_devs - 1);
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const unsigned index = 3 * static_cast<unsigned>(num_samples) + (num_std_devs - 1);
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const double raw_lb = cont_classic_lb(num_samples, theta, lb_equiv_table[index]);
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return raw_lb - 0.5; // fake round down
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}
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// This is the most difficult range to approximate; we will compute an "exact" LB.
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// We know that est <= 360, so specialNStar() shouldn't be ridiculously slow.
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const double delta = delta_of_num_std_devs[num_std_devs];
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return special_n_star(num_samples, theta, delta); // no need to round
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return static_cast<double>(special_n_star(num_samples, theta, delta)); // no need to round
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}
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// The following computes an approximation to the upper bound of a Frequentist
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// confidence interval based on the tails of the Binomial distribution.
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static double compute_approx_binomial_upper_bound(unsigned long long num_samples, double theta, unsigned num_std_devs) {
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if (theta == 1) return num_samples;
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if (theta == 1) return static_cast<double>(num_samples);
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if (num_samples == 0) {
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const double delta = delta_of_num_std_devs[num_std_devs];
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const double raw_ub = std::log(delta) / std::log(1 - theta);
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}
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// at this point we know 2 <= num_samples <= 120
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if (theta > (1 - 1e-5)) { // empirically-determined threshold
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return num_samples + 1;
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return static_cast<double>(num_samples + 1);
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}
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if (theta < (num_samples / 360.0)) { // empirically-determined threshold
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// here we use the Gaussian approximation, but with a modified num_std_devs
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const unsigned index = 3 * num_samples + (num_std_devs - 1);
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const unsigned index = 3 * static_cast<unsigned>(num_samples) + (num_std_devs - 1);
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const double raw_ub = cont_classic_ub(num_samples, theta, ub_equiv_table[index]);
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return raw_ub + 0.5; // fake round up
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}
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// This is the most difficult range to approximate; we will compute an "exact" UB.
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// We know that est <= 360, so specialNPrimeF() shouldn't be ridiculously slow.
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const double delta = delta_of_num_std_devs[num_std_devs];
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return special_n_prime_f(num_samples, theta, delta); // no need to round
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return static_cast<double>(special_n_prime_f(num_samples, theta, delta)); // no need to round
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}
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static void check_theta(double theta) {
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* @return the lower bound of the approximate Clopper-Pearson confidence interval for the
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* unknown success probability.
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*/
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static inline double approximate_lower_bound_on_p(
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static inline double approximate_lower_bound_on_p(uint64_t n, uint64_t k, double num_std_devs) {
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check_inputs(n, k);
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if (n == 0) { return 0.0; } // the coin was never flipped, so we know nothing
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else if (k == 0) { return 0.0; }
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else if (k == 1) { return (exact_lower_bound_on_p_k_eq_1(n, delta_of_num_stdevs(num_std_devs))); }
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else if (k == n) { return (exact_lower_bound_on_p_k_eq_n(n, delta_of_num_stdevs(num_std_devs))); }
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else {
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double x = abramowitz_stegun_formula_26p5p22((n - k) + 1, k, (-1.0 * num_std_devs));
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double x = abramowitz_stegun_formula_26p5p22((n - k) + 1.0, static_cast<double>(k), (-1.0 * num_std_devs));
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return (1.0 - x); // which is p
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}
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}
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* @return the upper bound of the approximate Clopper-Pearson confidence interval for the
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* unknown success probability.
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*/
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static inline double approximate_upper_bound_on_p(
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static inline double approximate_upper_bound_on_p(uint64_t n, uint64_t k, double num_std_devs) {
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check_inputs(n, k);
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if (n == 0) { return 1.0; } // the coin was never flipped, so we know nothing
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else if (k == n) { return 1.0; }
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else if (k == (n - 1)) {
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return (
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return (exact_upper_bound_on_p_k_eq_minusone(n, delta_of_num_stdevs(num_std_devs)));
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}
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else if (k == 0) {
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return (exact_upper_bound_on_p_k_eq_zero(n, delta_of_num_stdevs(num_std_devs)));
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}
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else {
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double x = abramowitz_stegun_formula_26p5p22(n - k, k + 1, num_std_devs);
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double x = abramowitz_stegun_formula_26p5p22(static_cast<double>(n - k), k + 1.0, num_std_devs);
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return (1.0 - x); // which is p
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}
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}
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* @param k is the number of successes. Must be non-negative, and cannot exceed n.
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* @return the estimate of the unknown binomial proportion.
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*/
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static inline double estimate_unknown_p(
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static inline double estimate_unknown_p(uint64_t n, uint64_t k) {
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check_inputs(n, k);
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if (n == 0) { return 0.5; } // the coin was never flipped, so we know nothing
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else { return ((double) k / (double) n); }
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}
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private:
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static inline void check_inputs(
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if (n < 0) { throw std::invalid_argument("N must be non-negative"); }
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if (k < 0) { throw std::invalid_argument("K must be non-negative"); }
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static inline void check_inputs(uint64_t n, uint64_t k) {
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if (k > n) { throw std::invalid_argument("K cannot exceed N"); }
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}
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// and it is worth keeping it that way so that it will always be easy to verify
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// that the formula was typed in correctly.
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static inline double abramowitz_stegun_formula_26p5p22(double a, double b,
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double yp) {
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static inline double abramowitz_stegun_formula_26p5p22(double a, double b, double yp) {
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const double b2m1 = (2.0 * b) - 1.0;
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const double a2m1 = (2.0 * a) - 1.0;
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const double lambda = ((yp * yp) - 3.0) / 6.0;
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// Formulas for some special cases.
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static inline double exact_upper_bound_on_p_k_eq_zero(
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static inline double exact_upper_bound_on_p_k_eq_zero(uint64_t n, double delta) {
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return (1.0 - pow(delta, (1.0 / n)));
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}
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static inline double exact_lower_bound_on_p_k_eq_n(
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static inline double exact_lower_bound_on_p_k_eq_n(uint64_t n, double delta) {
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return (pow(delta, (1.0 / n)));
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}
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static inline double exact_lower_bound_on_p_k_eq_1(
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static inline double exact_lower_bound_on_p_k_eq_1(uint64_t n, double delta) {
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return (1.0 - pow((1.0 - delta), (1.0 / n)));
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}
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static inline double
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static inline double exact_upper_bound_on_p_k_eq_minusone(uint64_t n, double delta) {
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return (pow((1.0 - delta), (1.0 / n)));
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}
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@@ -23,11 +23,14 @@
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#include <cstdint>
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#include <string>
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#include <memory>
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#include <iostream>
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namespace datasketches {
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static const uint64_t DEFAULT_SEED = 9001;
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enum resize_factor { X1 = 0, X2, X4, X8 };
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template<typename A> using AllocChar = typename std::allocator_traits<A>::template rebind_alloc<char>;
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template<typename A> using string = std::basic_string<char, std::char_traits<char>, AllocChar<A>>;
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@@ -46,6 +49,29 @@ constexpr uint8_t lg_size_from_count(uint32_t n, double load_factor) {
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return log2(n) + ((n > static_cast<uint32_t>((1 << (log2(n) + 1)) * load_factor)) ? 2 : 1);
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}
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// stream helpers to hide casts
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template<typename T>
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static inline T read(std::istream& is) {
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T value;
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is.read(reinterpret_cast<char*>(&value), sizeof(T));
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return value;
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}
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template<typename T>
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static inline void read(std::istream& is, T* ptr, size_t size_bytes) {
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is.read(reinterpret_cast<char*>(ptr), size_bytes);
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}
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template<typename T>
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static inline void write(std::ostream& os, T& value) {
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os.write(reinterpret_cast<const char*>(&value), sizeof(T));
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}
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template<typename T>
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static inline void write(std::ostream& os, const T* ptr, size_t size_bytes) {
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os.write(reinterpret_cast<const char*>(ptr), size_bytes);
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}
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} // namespace
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#endif // _COMMON_DEFS_HPP_
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@@ -38,29 +38,41 @@ fwd_type<T1, T2> conditional_forward(T2&& value) {
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// Forward container as iterators
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template<typename Container>
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-
auto forward_begin(Container&& c) ->
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-
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auto forward_begin(Container&& c) -> typename std::enable_if<
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std::is_lvalue_reference<Container>::value ||
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std::is_same<typename std::remove_reference<Container>::type::const_iterator, decltype(c.begin())>::value,
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decltype(c.begin())
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>::type
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{
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return c.begin();
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}
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template<typename Container>
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-
auto forward_begin(Container&& c) ->
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-
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auto forward_begin(Container&& c) -> typename std::enable_if<
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!std::is_lvalue_reference<Container>::value &&
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!std::is_same<typename std::remove_reference<Container>::type::const_iterator, decltype(c.begin())>::value,
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decltype(std::make_move_iterator(c.begin()))
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>::type
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{
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return std::make_move_iterator(c.begin());
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}
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template<typename Container>
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|
-
auto forward_end(Container&& c) ->
|
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|
-
|
61
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+
auto forward_end(Container&& c) -> typename std::enable_if<
|
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|
+
std::is_lvalue_reference<Container>::value ||
|
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+
std::is_same<typename std::remove_reference<Container>::type::const_iterator, decltype(c.begin())>::value,
|
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|
+
decltype(c.end())
|
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|
+
>::type
|
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|
{
|
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|
return c.end();
|
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68
|
}
|
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69
|
|
61
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|
template<typename Container>
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|
-
auto forward_end(Container&& c) ->
|
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|
-
|
71
|
+
auto forward_end(Container&& c) -> typename std::enable_if<
|
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|
+
!std::is_lvalue_reference<Container>::value &&
|
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|
+
!std::is_same<typename std::remove_reference<Container>::type::const_iterator, decltype(c.begin())>::value,
|
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|
+
decltype(std::make_move_iterator(c.end()))
|
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|
+
>::type
|
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|
{
|
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|
return std::make_move_iterator(c.end());
|
66
78
|
}
|
@@ -94,7 +94,7 @@ static inline uint8_t count_leading_zeros_in_u64(uint64_t input) {
|
|
94
94
|
static inline uint8_t count_trailing_zeros_in_u32(uint32_t input) {
|
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95
|
for (int i = 0; i < 4; i++) {
|
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96
|
const int byte = input & 0xff;
|
97
|
-
if (byte != 0) return (i << 3) + byte_trailing_zeros_table[byte];
|
97
|
+
if (byte != 0) return static_cast<uint8_t>((i << 3) + byte_trailing_zeros_table[byte]);
|
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98
|
input >>= 8;
|
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99
|
}
|
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|
return 32;
|
@@ -103,7 +103,7 @@ static inline uint8_t count_trailing_zeros_in_u32(uint32_t input) {
|
|
103
103
|
static inline uint8_t count_trailing_zeros_in_u64(uint64_t input) {
|
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|
for (int i = 0; i < 8; i++) {
|
105
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|
const int byte = input & 0xff;
|
106
|
-
if (byte != 0) return (i << 3) + byte_trailing_zeros_table[byte];
|
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|
+
if (byte != 0) return static_cast<uint8_t>((i << 3) + byte_trailing_zeros_table[byte]);
|
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|
input >>= 8;
|
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|
}
|
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|
return 64;
|
@@ -52,6 +52,18 @@ static inline size_t copy_to_mem(const void* src, void* dst, size_t size) {
|
|
52
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|
return size;
|
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|
}
|
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54
|
|
55
|
+
template<typename T>
|
56
|
+
static inline size_t copy_to_mem(const T& item, void* dst) {
|
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|
+
memcpy(dst, &item, sizeof(T));
|
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|
+
return sizeof(T);
|
59
|
+
}
|
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|
+
|
61
|
+
template<typename T>
|
62
|
+
static inline size_t copy_from_mem(const void* src, T& item) {
|
63
|
+
memcpy(&item, src, sizeof(T));
|
64
|
+
return sizeof(T);
|
65
|
+
}
|
66
|
+
|
55
67
|
} // namespace
|
56
68
|
|
57
69
|
#endif // _MEMORY_OPERATIONS_HPP_
|
@@ -51,7 +51,7 @@ struct serde<T, typename std::enable_if<std::is_arithmetic<T>::value>::type> {
|
|
51
51
|
bool failure = false;
|
52
52
|
try {
|
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53
|
os.write(reinterpret_cast<const char*>(items), sizeof(T) * num);
|
54
|
-
} catch (std::ostream::failure&
|
54
|
+
} catch (std::ostream::failure&) {
|
55
55
|
failure = true;
|
56
56
|
}
|
57
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|
if (failure || !os.good()) {
|
@@ -62,7 +62,7 @@ struct serde<T, typename std::enable_if<std::is_arithmetic<T>::value>::type> {
|
|
62
62
|
bool failure = false;
|
63
63
|
try {
|
64
64
|
is.read((char*)items, sizeof(T) * num);
|
65
|
-
} catch (std::istream::failure&
|
65
|
+
} catch (std::istream::failure&) {
|
66
66
|
failure = true;
|
67
67
|
}
|
68
68
|
if (failure || !is.good()) {
|
@@ -99,11 +99,11 @@ struct serde<std::string> {
|
|
99
99
|
bool failure = false;
|
100
100
|
try {
|
101
101
|
for (; i < num && os.good(); i++) {
|
102
|
-
uint32_t length = items[i].size();
|
102
|
+
uint32_t length = static_cast<uint32_t>(items[i].size());
|
103
103
|
os.write((char*)&length, sizeof(length));
|
104
104
|
os.write(items[i].c_str(), length);
|
105
105
|
}
|
106
|
-
} catch (std::ostream::failure&
|
106
|
+
} catch (std::ostream::failure&) {
|
107
107
|
failure = true;
|
108
108
|
}
|
109
109
|
if (failure || !os.good()) {
|
@@ -121,12 +121,12 @@ struct serde<std::string> {
|
|
121
121
|
std::string str;
|
122
122
|
str.reserve(length);
|
123
123
|
for (uint32_t j = 0; j < length; j++) {
|
124
|
-
str.push_back(is.get());
|
124
|
+
str.push_back(static_cast<char>(is.get()));
|
125
125
|
}
|
126
126
|
if (!is.good()) { break; }
|
127
127
|
new (&items[i]) std::string(std::move(str));
|
128
128
|
}
|
129
|
-
} catch (std::istream::failure&
|
129
|
+
} catch (std::istream::failure&) {
|
130
130
|
failure = true;
|
131
131
|
}
|
132
132
|
if (failure || !is.good()) {
|
@@ -143,7 +143,7 @@ struct serde<std::string> {
|
|
143
143
|
size_t serialize(void* ptr, size_t capacity, const std::string* items, unsigned num) const {
|
144
144
|
size_t bytes_written = 0;
|
145
145
|
for (unsigned i = 0; i < num; ++i) {
|
146
|
-
const uint32_t length = items[i].size();
|
146
|
+
const uint32_t length = static_cast<uint32_t>(items[i].size());
|
147
147
|
const size_t new_bytes = length + sizeof(length);
|
148
148
|
check_memory_size(bytes_written + new_bytes, capacity);
|
149
149
|
memcpy(ptr, &length, sizeof(length));
|
@@ -15,6 +15,10 @@
|
|
15
15
|
# specific language governing permissions and limitations
|
16
16
|
# under the License.
|
17
17
|
|
18
|
+
# two parts here, the common test code for other parts to use,
|
19
|
+
# and an integration test using the other parts of the library.
|
20
|
+
|
21
|
+
# common dependencies for tests
|
18
22
|
add_library(common_test OBJECT "")
|
19
23
|
|
20
24
|
set_target_properties(common_test PROPERTIES
|
@@ -36,3 +40,23 @@ target_sources(common_test
|
|
36
40
|
${CMAKE_CURRENT_SOURCE_DIR}/catch_runner.cpp
|
37
41
|
${CMAKE_CURRENT_SOURCE_DIR}/test_allocator.cpp
|
38
42
|
)
|
43
|
+
|
44
|
+
# now the integration test part
|
45
|
+
add_executable(integration_test)
|
46
|
+
|
47
|
+
target_link_libraries(integration_test cpc fi hll kll req sampling theta tuple common_test)
|
48
|
+
|
49
|
+
set_target_properties(integration_test PROPERTIES
|
50
|
+
CXX_STANDARD 11
|
51
|
+
CXX_STANDARD_REQUIRED YES
|
52
|
+
)
|
53
|
+
|
54
|
+
add_test(
|
55
|
+
NAME integration_test
|
56
|
+
COMMAND integration_test
|
57
|
+
)
|
58
|
+
|
59
|
+
target_sources(integration_test
|
60
|
+
PRIVATE
|
61
|
+
integration_test.cpp
|
62
|
+
)
|
@@ -0,0 +1,77 @@
|
|
1
|
+
/*
|
2
|
+
* Licensed to the Apache Software Foundation (ASF) under one
|
3
|
+
* or more contributor license agreements. See the NOTICE file
|
4
|
+
* distributed with this work for additional information
|
5
|
+
* regarding copyright ownership. The ASF licenses this file
|
6
|
+
* to you under the Apache License, Version 2.0 (the
|
7
|
+
* "License"); you may not use this file except in compliance
|
8
|
+
* with the License. You may obtain a copy of the License at
|
9
|
+
*
|
10
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
11
|
+
*
|
12
|
+
* Unless required by applicable law or agreed to in writing,
|
13
|
+
* software distributed under the License is distributed on an
|
14
|
+
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
|
15
|
+
* KIND, either express or implied. See the License for the
|
16
|
+
* specific language governing permissions and limitations
|
17
|
+
* under the License.
|
18
|
+
*/
|
19
|
+
|
20
|
+
#include <catch.hpp>
|
21
|
+
|
22
|
+
#include "cpc_sketch.hpp"
|
23
|
+
#include "cpc_union.hpp"
|
24
|
+
#include "frequent_items_sketch.hpp"
|
25
|
+
#include "hll.hpp"
|
26
|
+
#include "kll_sketch.hpp"
|
27
|
+
#include "req_sketch.hpp"
|
28
|
+
#include "var_opt_sketch.hpp"
|
29
|
+
#include "var_opt_union.hpp"
|
30
|
+
#include "theta_sketch.hpp"
|
31
|
+
#include "theta_union.hpp"
|
32
|
+
#include "theta_intersection.hpp"
|
33
|
+
#include "theta_a_not_b.hpp"
|
34
|
+
#include "tuple_sketch.hpp"
|
35
|
+
#include "tuple_union.hpp"
|
36
|
+
#include "tuple_intersection.hpp"
|
37
|
+
#include "tuple_a_not_b.hpp"
|
38
|
+
|
39
|
+
namespace datasketches {
|
40
|
+
|
41
|
+
template<typename Summary>
|
42
|
+
struct subtracting_intersection_policy {
|
43
|
+
void operator()(Summary& summary, const Summary& other) const {
|
44
|
+
summary -= other;
|
45
|
+
}
|
46
|
+
};
|
47
|
+
|
48
|
+
using tuple_intersection_float = tuple_intersection<float, subtracting_intersection_policy<float>>;
|
49
|
+
|
50
|
+
TEST_CASE("integration: declare all sketches", "[integration]") {
|
51
|
+
cpc_sketch cpc(12);
|
52
|
+
cpc_union cpc_u(12);
|
53
|
+
|
54
|
+
frequent_items_sketch<std::string> fi(100);
|
55
|
+
|
56
|
+
hll_sketch hll(13);
|
57
|
+
hll_union hll_u(13);
|
58
|
+
|
59
|
+
kll_sketch<double> kll(200);
|
60
|
+
|
61
|
+
req_sketch<double> req(12);
|
62
|
+
|
63
|
+
var_opt_sketch<std::string> vo(100);
|
64
|
+
var_opt_union<std::string> vo_u(100);
|
65
|
+
|
66
|
+
update_theta_sketch theta = update_theta_sketch::builder().build();
|
67
|
+
theta_union theta_u = theta_union::builder().build();
|
68
|
+
theta_intersection theta_i;
|
69
|
+
theta_a_not_b theta_anb;
|
70
|
+
|
71
|
+
auto tuple = update_tuple_sketch<float>::builder().build();
|
72
|
+
auto tuple_u = tuple_union<float>::builder().build();
|
73
|
+
tuple_intersection_float tuple_i;
|
74
|
+
tuple_a_not_b<float> tuple_anb;
|
75
|
+
}
|
76
|
+
|
77
|
+
} /* namespace datasketches */
|