datalog-theme 0.6.1 → 0.8.0

data/_sass/_features.scss

@@ -0,0 +1,17 @@
+// Optional features whose styles the stylesheet includes.
+//
+// assets/css/main.scss configures this module from the site's settings before
+// it loads the theme, so a site carries only the styles of the features it
+// uses. Partials read the flags and load the matching styles with
+// `@if features.$flag { @include meta.load-css(...) }` at the position those
+// rules always had, so turning every flag on leaves the stylesheet unchanged.
+//
+// Every flag defaults to true: a site that replaces main.scss with a plain
+// `@use "theme"` keeps the complete stylesheet.
+
+$search: true !default;
+$visualizations: true !default;
+$notebooks: true !default;
+$packages: true !default;
+$academic-dashboard: true !default;
+$open-science-badges: true !default;

data/_sass/_font-fallbacks.scss

@@ -0,0 +1,43 @@
+// Metric-compatible local fallbacks for the IBM Plex web fonts.
+//
+// The Google Fonts stylesheet loads with `display=swap`, so text first paints
+// in a local font and swaps once Plex arrives. These faces scale the local
+// fonts to Plex's metrics (size-adjust from the average glyph width, the
+// overrides from ascent, descent and line gap), so the swap barely moves the
+// layout. Values derive from the fonts' metric tables (@capsizecss/metrics).
+
+@font-face {
+  font-family: 'IBM Plex Sans Fallback';
+  src: local('Arial'), local('Liberation Sans'), local('Helvetica Neue'), local('Helvetica');
+  size-adjust: 101.17%;
+  ascent-override: 101.32%;
+  descent-override: 27.18%;
+  line-gap-override: 0%;
+}
+
+@font-face {
+  font-family: 'IBM Plex Serif Fallback';
+  src: local('Georgia');
+  size-adjust: 106.1%;
+  ascent-override: 96.61%;
+  descent-override: 25.92%;
+  line-gap-override: 0%;
+}
+
+@font-face {
+  font-family: 'IBM Plex Serif Fallback Times';
+  src: local('Times New Roman'), local('Liberation Serif'), local('Times');
+  size-adjust: 116.43%;
+  ascent-override: 88.04%;
+  descent-override: 23.62%;
+  line-gap-override: 0%;
+}
+
+@font-face {
+  font-family: 'IBM Plex Mono Fallback';
+  src: local('Courier New'), local('Liberation Mono'), local('Courier');
+  size-adjust: 99.98%;
+  ascent-override: 102.52%;
+  descent-override: 27.5%;
+  line-gap-override: 0%;
+}

data/_sass/_header.scss

@@ -226,6 +226,16 @@ body.dark-mode .header-control {
   }
 }
 
+// The menu is collapsed in the markup so the page does not reflow (and animate
+// the reflow) when the navigation script initialises. Without JavaScript
+// nothing could open it, so keep it visible in that case; head.html adds the
+// `js` class before the body renders.
+html:not(.js) .site-nav {
+  max-height: none;
+  opacity: 1;
+  pointer-events: auto;
+}
+
 .nav-list {
   display: flex;
   flex-direction: column;

data/_sass/_layout.scss

@@ -259,7 +259,7 @@ body.dark-mode .footer {
   font-size: map.get($font-size-scale, sm);
   line-height: $line-height-base;
 
-  h3 {
+  h2 {
     color: #fff;
     font-size: map.get($font-size-scale, sm);
     font-weight: 700;
@@ -278,6 +278,12 @@ body.dark-mode .footer {
     }
   }
 
+  // body.dark-mode a outranks the rule above; on the navy footer the dark
+  // accent needs the lighter shade to reach 4.5:1 through the muted paragraphs.
+  body.dark-mode & a {
+    color: #93c5fd;
+  }
+
   p {
     margin: 0 0 map.get($spacing, 2);
   }
@@ -359,7 +365,7 @@ body.dark-mode .footer {
 
 .footer-privacy-note {
   font-size: map.get($font-size-scale, xs);
-  opacity: 0.5;
+  opacity: 0.8;
   margin-top: map.get($spacing, 1);
 }
 
@@ -369,7 +375,7 @@ body.dark-mode .footer {
 
 .footer-affiliation {
   display: block;
-  opacity: 0.65;
+  opacity: 0.85;
   font-size: map.get($font-size-scale, xs);
 }
 
@@ -377,12 +383,12 @@ body.dark-mode .footer {
 .footer-orcid,
 .footer-contact {
   font-size: map.get($font-size-scale, xs);
-  opacity: 0.65;
+  opacity: 0.85;
 }
 
 .footer-tagline {
   font-style: italic;
-  opacity: 0.7;
+  opacity: 0.85;
 }
 
 .footer-feeds {
@@ -395,7 +401,7 @@ body.dark-mode .footer {
   border-top: 1px solid rgba(#fff, 0.1);
   text-align: center;
   font-size: map.get($font-size-scale, xs);
-  opacity: 0.5;
+  opacity: 0.8;
 
   p { margin: 0; }
 }
@@ -470,7 +476,7 @@ body.dark-mode .research-metrics {
   transition: border-color $transition-base;
 
   h3 {
-    color: $color-accent-secondary;
+    color: $color-accent-secondary-text;
     margin: 0;
   }
 
@@ -480,7 +486,7 @@ body.dark-mode .research-metrics {
 
   &:hover {
     border-color: rgba($color-accent-secondary, 0.4);
-    h3 { color: $color-accent-secondary; }
+    h3 { color: $color-accent-secondary-text; }
   }
 }
 
@@ -640,7 +646,7 @@ body.dark-mode .author-profile__bio {
 
 .skill-tag--framework {
   background: rgba($color-accent-secondary, 0.08);
-  color: $color-accent-secondary;
+  color: $color-accent-secondary-text;
 }
 
 .skill-tag--tool {
@@ -926,7 +932,7 @@ body.dark-mode .post-meta {
   padding: 0.1rem 0.5rem;
   border-radius: map.get($radius, sm);
   background: rgba($color-accent-secondary, 0.1);
-  color: $color-accent-secondary;
+  color: $color-accent-secondary-text;
 }
 
 body.dark-mode .post-meta__badge {
@@ -1066,7 +1072,7 @@ body.dark-mode .post-tag {
 
 .post-category {
   background: rgba($color-accent-secondary, 0.08);
-  color: $color-accent-secondary;
+  color: $color-accent-secondary-text;
 
   &:hover { background: rgba($color-accent-secondary, 0.15); }
 }
@@ -1166,7 +1172,7 @@ body.dark-mode .code-block-meta {
 .code-language {
   font-family: $font-family-mono;
   font-weight: 600;
-  color: $color-accent-secondary;
+  color: $color-accent-secondary-text;
   letter-spacing: 0.03em;
 }
 

data/_sass/_mathematical.scss

@@ -267,7 +267,7 @@
   &:focus-visible {
     background: rgba($color-accent-secondary, 0.12);
     border-color: rgba($color-accent-secondary, 0.4);
-    color: $color-accent-secondary;
+    color: $color-accent-secondary-text;
   }
 }
 

data/_sass/_notebooks.scss

@@ -0,0 +1,322 @@
+// Notebook pages: _layouts/notebook.html and the cell and output markup that
+// _plugins/notebook_converter.rb generates. _components.scss loads this only when
+// the site has notebook pages.
+
+@use 'sass:map';
+@use "sass:color";
+
+@use 'variables' as *;
+@use 'mixins' as *;
+
+.notebook-article {
+  display: grid;
+  gap: map.get($spacing, 5);
+  margin: map.get($spacing, 6) auto;
+  max-width: 1200px;
+}
+
+.notebook-article__header {
+  background: rgba($color-surface-100, 0.8);
+  padding: map.get($spacing, 6);
+  border-radius: 1.25rem;
+  box-shadow: 0 20px 60px rgba($color-ink-900, 0.08);
+  position: relative;
+  overflow: hidden;
+}
+
+.notebook-article__header::after {
+  content: '';
+  position: absolute;
+  inset: auto -30% -45% auto;
+  width: 45%;
+  height: 45%;
+  background: radial-gradient(circle at center, rgba($color-accent-primary, 0.35), transparent 65%);
+  pointer-events: none;
+}
+
+.notebook-article__label {
+  text-transform: uppercase;
+  letter-spacing: 0.12em;
+  font-size: map.get($font-size-scale, xs);
+  color: $color-accent-primary;
+  margin-bottom: map.get($spacing, 2);
+}
+
+.notebook-article__title {
+  font-size: clamp(2.4rem, 4vw, 3.2rem);
+  margin: 0 0 map.get($spacing, 3);
+}
+
+.notebook-article__summary {
+  font-size: map.get($font-size-scale, md);
+  color: $color-ink-600;
+  max-width: 65ch;
+  margin-bottom: map.get($spacing, 4);
+}
+
+.notebook-article__meta {
+  list-style: none;
+  padding: 0;
+  margin: 0 0 map.get($spacing, 4);
+  display: flex;
+  flex-wrap: wrap;
+  gap: map.get($spacing, 3);
+  color: $color-ink-600;
+}
+
+.notebook-article__meta li {
+  display: flex;
+  gap: map.get($spacing, 1);
+  align-items: baseline;
+}
+
+.notebook-article__meta span {
+  font-weight: 600;
+  color: $color-ink-800;
+}
+
+.notebook-article__actions {
+  display: flex;
+  flex-wrap: wrap;
+  gap: map.get($spacing, 3);
+  margin-bottom: map.get($spacing, 4);
+}
+
+.notebook-article__actions .btn {
+  display: inline-flex;
+  align-items: center;
+  gap: map.get($spacing, 2);
+}
+
+.notebook-article__tags {
+  display: flex;
+  flex-wrap: wrap;
+  gap: map.get($spacing, 2);
+  padding: 0;
+  margin: 0;
+  list-style: none;
+}
+
+.notebook-article__tags li {
+  background: rgba($color-accent-tertiary, 0.18);
+  color: $color-accent-tertiary;
+  border-radius: 999px;
+  padding: map.get($spacing, 1) map.get($spacing, 3);
+  font-size: map.get($font-size-scale, xs);
+  letter-spacing: 0.04em;
+}
+
+.notebook-article__layout {
+  display: grid;
+  gap: map.get($spacing, 5);
+}
+
+@media (min-width: 960px) {
+  .notebook-article__layout {
+    grid-template-columns: minmax(0, 2.3fr) minmax(280px, 1fr);
+    gap: map.get($spacing, 6);
+  }
+}
+
+.notebook-article__content {
+  display: flex;
+  flex-direction: column;
+  gap: map.get($spacing, 4);
+}
+
+.notebook-article__sidebar {
+  position: sticky;
+  top: calc(var(--header-height, 96px) + map.get($spacing, 4));
+  align-self: start;
+  display: flex;
+  flex-direction: column;
+  gap: map.get($spacing, 4);
+}
+
+.notebook-sidebar__section {
+  background: rgba($color-surface-100, 0.8);
+  border-radius: 1rem;
+  padding: map.get($spacing, 4);
+  box-shadow: 0 12px 30px rgba($color-ink-900, 0.04);
+}
+
+.notebook-sidebar__section h2 {
+  font-size: map.get($font-size-scale, sm);
+  text-transform: uppercase;
+  letter-spacing: 0.08em;
+  margin-bottom: map.get($spacing, 3);
+}
+
+.notebook-sidebar__stats {
+  list-style: none;
+  padding: 0;
+  margin: 0;
+  display: grid;
+  gap: map.get($spacing, 2);
+}
+
+.notebook-sidebar__stats li {
+  font-size: map.get($font-size-scale, sm);
+  color: $color-ink-700;
+}
+
+.notebook-sidebar__metadata {
+  margin: 0;
+  display: grid;
+  gap: map.get($spacing, 2);
+}
+
+.notebook-sidebar__metadata div {
+  display: grid;
+  gap: map.get($spacing, 1);
+}
+
+.notebook-sidebar__metadata dt {
+  font-size: map.get($font-size-scale, xs);
+  text-transform: uppercase;
+  letter-spacing: 0.06em;
+  color: $color-ink-500;
+}
+
+.notebook-sidebar__metadata dd {
+  margin: 0;
+  font-size: map.get($font-size-scale, sm);
+  color: $color-ink-700;
+  word-break: break-word;
+}
+
+.notebook-sidebar__clone {
+  background: rgba($color-ink-900, 0.08);
+  border-radius: 0.75rem;
+  padding: map.get($spacing, 3);
+  font-family: $font-stack-code;
+  overflow-x: auto;
+}
+
+.notebook-sidebar__links {
+  list-style: none;
+  padding: 0;
+  margin: 0;
+  display: grid;
+  gap: map.get($spacing, 2);
+}
+
+.notebook-sidebar__link {
+  font-weight: 600;
+  color: $color-accent-primary;
+}
+
+.notebook-cell {
+  border-left: 4px solid $color-accent-primary;
+  padding: map.get($spacing, 4);
+  border-radius: 1rem;
+  background: rgba($color-accent-primary, 0.06);
+  margin: map.get($spacing, 3) 0;
+  box-shadow: inset 0 0 0 1px rgba($color-ink-900, 0.04);
+}
+
+.notebook-cell--input {
+  border-left-color: $color-accent-secondary;
+}
+
+.notebook-cell--output {
+  border-left-color: $color-accent-tertiary;
+}
+
+.notebook-cell__header {
+  display: flex;
+  align-items: center;
+  justify-content: space-between;
+  font-size: map.get($font-size-scale, xs);
+  color: $color-ink-500;
+  margin-bottom: map.get($spacing, 2);
+  text-transform: uppercase;
+  letter-spacing: 0.08em;
+}
+
+.notebook-cell__code {
+  margin: 0;
+  overflow: auto;
+  border-radius: 0.75rem;
+  background: rgba($color-ink-900, 0.08);
+  padding: map.get($spacing, 3);
+}
+
+.notebook-cell__outputs {
+  display: grid;
+  gap: map.get($spacing, 3);
+}
+
+.notebook-output {
+  border-radius: 0.75rem;
+  padding: map.get($spacing, 3);
+  font-family: $font-stack-code;
+  background: rgba($color-ink-900, 0.04);
+  overflow-x: auto;
+  margin: 0;
+}
+
+.notebook-output--stream {
+  color: $color-ink-700;
+}
+
+.notebook-output--error {
+  color: $color-critical-600;
+  background: rgba($color-critical-200, 0.35);
+  border: 1px solid rgba($color-critical-400, 0.6);
+}
+
+.notebook-output__trace {
+  margin-top: map.get($spacing, 2);
+  white-space: pre-wrap;
+}
+
+.notebook-output__figure {
+  margin: 0;
+}
+
+.notebook-output__figure img {
+  width: 100%;
+  height: auto;
+  border-radius: 0.75rem;
+  box-shadow: 0 10px 30px rgba($color-ink-900, 0.15);
+}
+
+.notebook-output-plotly,
+.notebook-output-vega {
+  min-height: 320px;
+  border-radius: 0.75rem;
+  background: rgba($color-ink-900, 0.04);
+  display: grid;
+  place-items: center;
+  padding: map.get($spacing, 3);
+}
+
+.notebook-output__warning {
+  font-size: map.get($font-size-scale, sm);
+  color: $color-ink-600;
+  text-align: center;
+  margin: 0;
+}
+
+.notebook-output--widget {
+  font-style: italic;
+  color: $color-accent-secondary-text;
+}
+
+.notebook-segment {
+  display: grid;
+  gap: map.get($spacing, 2);
+}
+
+.notebook-segment__label {
+  font-size: map.get($font-size-scale, xs);
+  letter-spacing: 0.1em;
+  text-transform: uppercase;
+  color: $color-ink-400;
+}
+
+.notebook-segment__body {
+  display: grid;
+  gap: map.get($spacing, 3);
+}

data/_sass/_open-science-badges.scss

@@ -0,0 +1,56 @@
+// Open science badges (_includes/components/open-science-badges.html), which render
+// only when _data/academic.yml defines badges; _components.scss loads this only then.
+
+@use 'sass:map';
+@use "sass:color";
+
+@use 'variables' as *;
+@use 'mixins' as *;
+
+.open-science-badges {
+  margin-block: 3rem;
+  padding: 1.5rem;
+  border-radius: 1rem;
+  background: linear-gradient(135deg, rgba(12, 35, 64, 0.05), rgba(50, 119, 246, 0.08));
+}
+
+.open-science-badges__intro {
+  margin-bottom: 1rem;
+  color: var(--muted-foreground, #4a5568);
+}
+
+.open-science-badges__list {
+  display: flex;
+  flex-wrap: wrap;
+  gap: 1rem;
+  padding: 0;
+  margin: 0;
+  list-style: none;
+}
+
+.open-science-badge {
+  display: grid;
+  gap: 0.25rem;
+  padding: 0.85rem 1rem;
+  min-width: 10rem;
+  border-radius: 0.75rem;
+  background: rgba(12, 35, 64, 0.08);
+  border: 1px solid rgba(12, 35, 64, 0.12);
+  transition: transform 0.2s ease, box-shadow 0.2s ease;
+}
+
+.open-science-badge:focus-within,
+.open-science-badge:hover {
+  transform: translateY(-2px);
+  box-shadow: 0 8px 24px rgba(12, 35, 64, 0.12);
+}
+
+.open-science-badge__label {
+  font-weight: 600;
+}
+
+.open-science-badge__description,
+.open-science-badge__criteria {
+  font-size: 0.85rem;
+  color: var(--muted-foreground, #4a5568);
+}

data/_sass/{_phase1-enhancements.scss → _post-components.scss}

@@ -1,5 +1,5 @@
 // ============================================================================
-// Phase 1 Enhancements - New Features Styles
+// Post components: what _layouts/post.html adds to every post
 // ============================================================================
 // - Social sharing buttons
 // - Breadcrumb navigation
@@ -545,6 +545,51 @@
   }
 }
 
+// Dark mode previously darkened only the badge background, leaving the level
+// colours (dark blue, dark green, dark red) on a near-black pill: the
+// intermediate badge measured 1.93:1. These invert the pairing instead.
+body.dark-mode .difficulty-badge {
+  &--beginner {
+    background-color: rgba(16, 185, 129, 0.15);
+    color: #6ee7b7;
+    border-color: rgba(16, 185, 129, 0.4);
+
+    &:hover {
+      background-color: rgba(16, 185, 129, 0.25);
+    }
+  }
+
+  &--intermediate {
+    background-color: rgba(59, 130, 246, 0.15);
+    color: #93c5fd;
+    border-color: rgba(59, 130, 246, 0.4);
+
+    &:hover {
+      background-color: rgba(59, 130, 246, 0.25);
+    }
+  }
+
+  &--advanced {
+    background-color: rgba(249, 115, 22, 0.15);
+    color: #fdba74;
+    border-color: rgba(249, 115, 22, 0.4);
+
+    &:hover {
+      background-color: rgba(249, 115, 22, 0.25);
+    }
+  }
+
+  &--expert {
+    background-color: rgba(239, 68, 68, 0.15);
+    color: #fca5a5;
+    border-color: rgba(239, 68, 68, 0.4);
+
+    &:hover {
+      background-color: rgba(239, 68, 68, 0.25);
+    }
+  }
+}
+
 // ============================================================================
 // Print Styles
 // ============================================================================