datacite-mapping 0.1.0
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- checksums.yaml +7 -0
- data/.gitignore +42 -0
- data/.rubocop.yml +28 -0
- data/.ruby-version +1 -0
- data/.travis.yml +2 -0
- data/.yardopts +2 -0
- data/CHANGES.md +3 -0
- data/Gemfile +3 -0
- data/LICENSE.md +22 -0
- data/README.md +168 -0
- data/Rakefile +49 -0
- data/datacite-mapping.gemspec +37 -0
- data/examples/reading.rb +75 -0
- data/examples/writing.rb +49 -0
- data/lib/datacite/mapping.rb +36 -0
- data/lib/datacite/mapping/alternate_identifier.rb +45 -0
- data/lib/datacite/mapping/contributor.rb +125 -0
- data/lib/datacite/mapping/creator.rb +48 -0
- data/lib/datacite/mapping/date.rb +153 -0
- data/lib/datacite/mapping/description.rb +121 -0
- data/lib/datacite/mapping/geo_location.rb +49 -0
- data/lib/datacite/mapping/geo_location_box.rb +137 -0
- data/lib/datacite/mapping/geo_location_point.rb +102 -0
- data/lib/datacite/mapping/identifier.rb +45 -0
- data/lib/datacite/mapping/module_info.rb +12 -0
- data/lib/datacite/mapping/name_identifier.rb +48 -0
- data/lib/datacite/mapping/related_identifier.rb +209 -0
- data/lib/datacite/mapping/resource.rb +201 -0
- data/lib/datacite/mapping/resource_type.rb +83 -0
- data/lib/datacite/mapping/rights.rb +36 -0
- data/lib/datacite/mapping/subject.rb +55 -0
- data/lib/datacite/mapping/title.rb +69 -0
- data/spec/.rubocop.yml +7 -0
- data/spec/data/resource.xml +61 -0
- data/spec/rspec_custom_matchers.rb +69 -0
- data/spec/spec_helper.rb +31 -0
- data/spec/unit/datacite/mapping/alternate_identifier_spec.rb +60 -0
- data/spec/unit/datacite/mapping/contributor_spec.rb +129 -0
- data/spec/unit/datacite/mapping/creator_spec.rb +125 -0
- data/spec/unit/datacite/mapping/date_spec.rb +246 -0
- data/spec/unit/datacite/mapping/description_spec.rb +89 -0
- data/spec/unit/datacite/mapping/geo_location_box_spec.rb +241 -0
- data/spec/unit/datacite/mapping/geo_location_point_spec.rb +148 -0
- data/spec/unit/datacite/mapping/geo_location_spec.rb +116 -0
- data/spec/unit/datacite/mapping/identifier_spec.rb +75 -0
- data/spec/unit/datacite/mapping/name_identifier_spec.rb +89 -0
- data/spec/unit/datacite/mapping/related_identifier_spec.rb +157 -0
- data/spec/unit/datacite/mapping/resource_spec.rb +727 -0
- data/spec/unit/datacite/mapping/resource_type_spec.rb +69 -0
- data/spec/unit/datacite/mapping/rights_spec.rb +78 -0
- data/spec/unit/datacite/mapping/subject_spec.rb +108 -0
- data/spec/unit/datacite/mapping/title_spec.rb +113 -0
- metadata +262 -0
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require 'xml/mapping_extensions'
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module Datacite
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module Mapping
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# Controlled vocabulary of general resource types.
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class ResourceTypeGeneral < TypesafeEnum::Base
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# @!parse AUDIOVISUAL = Audiovisual
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new :AUDIOVISUAL, 'Audiovisual'
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# @!parse COLLECTION = Collection
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new :COLLECTION, 'Collection'
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# @!parse DATASET = Dataset
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new :DATASET, 'Dataset'
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# @!parse EVENT = Event
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new :EVENT, 'Event'
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# @!parse IMAGE = Image
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new :IMAGE, 'Image'
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# @!parse INTERACTIVE_RESOURCE = InteractiveResource
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new :INTERACTIVE_RESOURCE, 'InteractiveResource'
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# @!parse MODEL = Model
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new :MODEL, 'Model'
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# @!parse PHYSICAL_OBJECT = PhysicalObject
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new :PHYSICAL_OBJECT, 'PhysicalObject'
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# @!parse SERVICE = Service
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new :SERVICE, 'Service'
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# @!parse SOFTWARE = Software
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new :SOFTWARE, 'Software'
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# @!parse SOUND = Sound
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new :SOUND, 'Sound'
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# @!parse TEXT = Text
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new :TEXT, 'Text'
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# @!parse WORKFLOW = Workflow
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new :WORKFLOW, 'Workflow'
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# @!parse OTHER = Other
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new :OTHER, 'Other'
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end
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# The type of the resource
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class ResourceType
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include XML::Mapping
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root_element_name 'resourceType'
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# @!attribute [rw] resource_type_general
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# @return [ResourceTypeGeneral] the general resource type
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typesafe_enum_node :resource_type_general, '@resourceTypeGeneral', class: ResourceTypeGeneral
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# @!attribute [rw] value
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# @return [String] additional free text description of the resource type. Optional.
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text_node :value, 'text()', default_value: nil
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alias_method :_resource_type_general=, :resource_type_general=
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private :_resource_type_general=
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# Initializes a new {ResourceType}
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# @param resource_type_general [ResourceTypeGeneral] the general resource type
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# @param value [String] additional free text description of the resource type.
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def initialize(resource_type_general:, value: nil)
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self.resource_type_general = resource_type_general
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self.value = value
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end
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def resource_type_general=(val)
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fail ArgumentError, 'General resource type cannot be nil' unless val
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self._resource_type_general = val
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end
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end
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end
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end
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require 'xml/mapping_extensions'
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module Datacite
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module Mapping
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# Rights information for the {Resource}
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class Rights
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include XML::Mapping
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# @!attribute [rw] uri
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# @return [URI, nil] a URI for the license. Optional.
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uri_node :uri, '@rightsURI', default_value: nil
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# @!attribute [rw] value
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# @return [String] the rights statement. Cannot be empty or nil.
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text_node :value, 'text()'
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# Initializes a new {Rights} object
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#
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# @param uri [URI, nil] a URI for the license. Optional.
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# @param value [String] the rights statement. Cannot be empty or nil.
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def initialize(uri: nil, value:)
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self.uri = uri
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self.value = value
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end
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alias_method :_value=, :value=
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private :_value=
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def value=(v)
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fail ArgumentError, 'Value cannot be empty or nil' unless v && !v.empty?
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self._value = v.strip
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end
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end
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end
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end
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require 'xml/mapping'
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module Datacite
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module Mapping
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# Subject, keyword, classification code, or key phrase describing the {Resource}.
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class Subject
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include XML::Mapping
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# @!attribute [rw] scheme
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# @return [String, nil] the subject scheme or classification code or authority if one is used. Optional.
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text_node :scheme, '@subjectScheme', default_value: nil
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# @!attribute [rw] scheme_uri
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# @return [URI, nil] the URI of the subject scheme or classification code or authority if one is used. Optional.
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uri_node :scheme_uri, '@schemeURI', default_value: nil
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# @!attribute [rw] language
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# @return [String] an IETF BCP 47, ISO 639-1 language code identifying the language.
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# It's unclear from the spec whether language is required; to play it safe, if it's missing, we default to 'en'.
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text_node :language, '@xml:lang', default_value: nil
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# @!attribute [rw] value
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# @return [String] the subject itself.
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text_node :value, 'text()'
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alias_method :_language, :language
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private :_language
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alias_method :_language=, :language=
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private :_language=
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# Initializes a new {Subject}
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# @param scheme [String, nil] the subject scheme or classification code or authority if one is used. Optional.
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# @param scheme_uri [URI, nil] the URI of the subject scheme or classification code or authority if one is used. Optional.
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# @param language [String] an IETF BCP 47, ISO 639-1 language code identifying the language.
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# It's unclear from the spec whether language is required; to play it safe, if it's missing, we default to 'en'.
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# @param value [String] the subject itself.
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def initialize(scheme: nil, scheme_uri: nil, language: 'en', value:)
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self.scheme = scheme
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self.scheme_uri = scheme_uri
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self.language = language
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self.value = value
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end
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def language
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_language || 'en'
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end
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def language=(value)
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self._language = value.strip if value
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end
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end
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end
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end
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require 'xml/mapping_extensions'
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module Datacite
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module Mapping
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# Controlled vocabulary of title types (for titles other than the main/default title).
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class TitleType < TypesafeEnum::Base
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# @!parse ALTERNATIVE_TITLE = AlternativeTitle
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new :ALTERNATIVE_TITLE, 'AlternativeTitle'
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# @!parse SUBTITLE = Subtitle
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new :SUBTITLE, 'Subtitle'
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# @!parse TRANSLATED_TITLE = TranslatedTitle
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new :TRANSLATED_TITLE, 'TranslatedTitle'
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end
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# A name or title by which a {Resource} is known.
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class Title
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include XML::Mapping
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# @!attribute [rw] language
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# @return [String] an IETF BCP 47, ISO 639-1 language code identifying the language.
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# It's unclear from the spec whether language is required; to play it safe, if it's missing, we default to 'en'.
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text_node :language, '@xml:lang', default_value: nil
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# @!attribute [rw] type
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# @return [TitleType, nil] the title type. Optional.
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typesafe_enum_node :type, '@titleType', class: TitleType, default_value: nil
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# @!attribute [rw] value
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# @return [String] the title itself.
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text_node :value, 'text()'
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alias_method :_language, :language
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private :_language
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alias_method :_language=, :language=
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private :_language=
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# Initializes a new {Title}.
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# @param language [String] an IETF BCP 47, ISO 639-1 language code identifying the language.
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# It's unclear from the spec whether language is required; to play it safe, if it's missing, we default to 'en'.
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# @param value [String] the title itself.
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# @param type [TitleType, nil] the title type. Optional.
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def initialize(language: 'en', value:, type: nil)
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self.language = language
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self.type = type
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self.value = value
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end
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def language
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_language || 'en'
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end
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def language=(value)
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self._language = value.strip if value
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end
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alias_method :_value=, :value=
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def value=(v)
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fail ArgumentError, 'Value cannot be empty or nil' unless v && !v.empty?
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self._value = v.strip
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end
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end
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end
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end
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data/spec/.rubocop.yml
ADDED
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<?xml version="1.0" encoding="UTF-8"?>
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<resource xsi:schemaLocation="http://datacite.org/schema/kernel-3 http://schema.datacite.org/meta/kernel-3/metadata.xsd" xmlns="http://datacite.org/schema/kernel-3" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
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<identifier identifierType="DOI">10.5072/example-full</identifier>
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<creators>
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<creator>
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<creatorName>Miller, Elizabeth</creatorName>
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<nameIdentifier schemeURI="http://orcid.org/" nameIdentifierScheme="ORCID">0000-0001-5000-0007</nameIdentifier>
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<affiliation>DataCite</affiliation>
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</creator>
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</creators>
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<titles>
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<title xml:lang="en-us">Full DataCite XML Example</title>
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<title xml:lang="en-us" titleType="Subtitle">Demonstration of DataCite Properties.</title>
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</titles>
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<publisher>DataCite</publisher>
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<publicationYear>2014</publicationYear>
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<subjects>
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<subject xml:lang="en-us" schemeURI="http://dewey.info/" subjectScheme="dewey">000 computer science</subject>
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</subjects>
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<contributors>
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<contributor contributorType="ProjectLeader">
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<contributorName>Starr, Joan</contributorName>
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<nameIdentifier schemeURI="http://orcid.org/" nameIdentifierScheme="ORCID">0000-0002-7285-027X</nameIdentifier>
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<affiliation>California Digital Library</affiliation>
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</contributor>
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</contributors>
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<dates>
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<date dateType="Updated">2014-10-17</date>
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</dates>
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<language>en-us</language>
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<resourceType resourceTypeGeneral="Software">XML</resourceType>
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<alternateIdentifiers>
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<alternateIdentifier alternateIdentifierType="URL">http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml</alternateIdentifier>
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</alternateIdentifiers>
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<relatedIdentifiers>
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<relatedIdentifier relatedIdentifierType="URL" relationType="HasMetadata" relatedMetadataScheme="citeproc+json" schemeURI="https://github.com/citation-style-language/schema/raw/master/csl-data.json">http://data.datacite.org/application/citeproc+json/10.5072/example-full</relatedIdentifier>
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<relatedIdentifier relatedIdentifierType="arXiv" relationType="IsReviewedBy">arXiv:0706.0001</relatedIdentifier>
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</relatedIdentifiers>
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<sizes>
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<size>3KB</size>
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</sizes>
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<formats>
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<format>application/xml</format>
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</formats>
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<version>3.1</version>
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<rightsList>
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<rights rightsURI="http://creativecommons.org/publicdomain/zero/1.0/">CC0 1.0 Universal</rights>
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</rightsList>
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<descriptions>
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<description xml:lang="en-us" descriptionType="Abstract">
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XML example of all DataCite Metadata Schema v3.1 properties.
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</description>
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</descriptions>
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<geoLocations>
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<geoLocation>
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<geoLocationPoint>31.233 -67.302</geoLocationPoint>
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<geoLocationBox>41.09 -71.032 42.893 -68.211</geoLocationBox>
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<geoLocationPlace>Atlantic Ocean</geoLocationPlace>
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</geoLocation>
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</geoLocations>
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</resource>
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require 'rspec/expectations'
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require 'equivalent-xml'
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RSpec::Matchers.define :be_xml do |expected|
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def to_nokogiri(xml)
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return nil unless xml
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case xml
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when Nokogiri::XML::Element
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xml
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when Nokogiri::XML::Document
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xml.root
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when String
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to_nokogiri(Nokogiri::XML(xml))
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when REXML::Element
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|
+
to_nokogiri(xml.to_s)
|
17
|
+
else
|
18
|
+
fail "be_xml() expected XML, got #{xml.class}"
|
19
|
+
end
|
20
|
+
end
|
21
|
+
|
22
|
+
def to_pretty(nokogiri)
|
23
|
+
return nil unless nokogiri
|
24
|
+
out = StringIO.new
|
25
|
+
save_options = Nokogiri::XML::Node::SaveOptions::FORMAT | Nokogiri::XML::Node::SaveOptions::NO_DECLARATION
|
26
|
+
nokogiri.write_xml_to(out, encoding: 'UTF-8', indent: 2, save_with: save_options)
|
27
|
+
out.string
|
28
|
+
end
|
29
|
+
|
30
|
+
match do |actual|
|
31
|
+
expected_xml = to_nokogiri(expected) || fail("expected value #{expected} does not appear to be XML")
|
32
|
+
actual_xml = to_nokogiri(actual)
|
33
|
+
|
34
|
+
EquivalentXml.equivalent?(expected_xml, actual_xml, element_order: false, normalize_whitespace: true)
|
35
|
+
end
|
36
|
+
|
37
|
+
failure_message do |actual|
|
38
|
+
expected_string = to_pretty(to_nokogiri(expected))
|
39
|
+
actual_string = to_pretty(to_nokogiri(actual)) || actual
|
40
|
+
"expected XML:\n#{expected_string}\n\nbut was:\n#{actual_string}"
|
41
|
+
end
|
42
|
+
|
43
|
+
failure_message_when_negated do |actual|
|
44
|
+
actual_xml = to_element(actual) || actual
|
45
|
+
"expected not to get XML:\n\t#{actual_xml}"
|
46
|
+
end
|
47
|
+
end
|
48
|
+
|
49
|
+
RSpec::Matchers.define :be_time do |expected|
|
50
|
+
|
51
|
+
def to_string(time)
|
52
|
+
time.is_a?(Time) ? time.utc.round(2).iso8601(2) : time.to_s
|
53
|
+
end
|
54
|
+
|
55
|
+
match do |actual|
|
56
|
+
if expected
|
57
|
+
fail "Expected value #{expected} is not a Time" unless expected.is_a?(Time)
|
58
|
+
actual.is_a?(Time) && (to_string(expected) == to_string(actual))
|
59
|
+
else
|
60
|
+
return actual.nil?
|
61
|
+
end
|
62
|
+
end
|
63
|
+
|
64
|
+
failure_message do |actual|
|
65
|
+
expected_str = to_string(expected)
|
66
|
+
actual_str = to_string(actual)
|
67
|
+
"expected time:\n#{expected_str}\n\nbut was:\n#{actual_str}"
|
68
|
+
end
|
69
|
+
end
|
data/spec/spec_helper.rb
ADDED
@@ -0,0 +1,31 @@
|
|
1
|
+
# ------------------------------------------------------------
|
2
|
+
# SimpleCov setup
|
3
|
+
|
4
|
+
if ENV['COVERAGE']
|
5
|
+
require 'simplecov'
|
6
|
+
require 'simplecov-console'
|
7
|
+
|
8
|
+
SimpleCov.minimum_coverage 100
|
9
|
+
SimpleCov.start do
|
10
|
+
add_filter '/spec/'
|
11
|
+
SimpleCov.formatter = SimpleCov::Formatter::MultiFormatter[
|
12
|
+
SimpleCov::Formatter::HTMLFormatter,
|
13
|
+
SimpleCov::Formatter::Console,
|
14
|
+
]
|
15
|
+
end
|
16
|
+
end
|
17
|
+
|
18
|
+
# ------------------------------------------------------------
|
19
|
+
# Rspec configuration
|
20
|
+
|
21
|
+
RSpec.configure do |config|
|
22
|
+
config.raise_errors_for_deprecations!
|
23
|
+
config.mock_with :rspec
|
24
|
+
end
|
25
|
+
|
26
|
+
require 'rspec_custom_matchers'
|
27
|
+
|
28
|
+
# ------------------------------------------------------------
|
29
|
+
# Stash::Wrapper
|
30
|
+
|
31
|
+
require 'datacite/mapping'
|
@@ -0,0 +1,60 @@
|
|
1
|
+
require 'spec_helper'
|
2
|
+
|
3
|
+
module Datacite
|
4
|
+
module Mapping
|
5
|
+
describe AlternateIdentifier do
|
6
|
+
|
7
|
+
describe '#initialize' do
|
8
|
+
it 'sets the identifier type and value' do
|
9
|
+
id = AlternateIdentifier.new(type: 'URL', value: 'http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml')
|
10
|
+
expect(id.type).to eq('URL')
|
11
|
+
expect(id.value).to eq('http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml')
|
12
|
+
end
|
13
|
+
end
|
14
|
+
|
15
|
+
describe 'type' do
|
16
|
+
it 'sets the type' do
|
17
|
+
rt = AlternateIdentifier.allocate
|
18
|
+
rt.type = 'URL'
|
19
|
+
expect(rt.type).to eq('URL')
|
20
|
+
end
|
21
|
+
it 'requires a type' do
|
22
|
+
rt = AlternateIdentifier.new(type: 'URL', value: 'http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml')
|
23
|
+
expect { rt.type = nil }.to raise_error(ArgumentError)
|
24
|
+
expect(rt.type).to eq('URL')
|
25
|
+
end
|
26
|
+
end
|
27
|
+
|
28
|
+
describe 'value' do
|
29
|
+
it 'sets the value' do
|
30
|
+
rt = AlternateIdentifier.allocate
|
31
|
+
rt.value = 'http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml'
|
32
|
+
expect(rt.value).to eq('http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml')
|
33
|
+
end
|
34
|
+
it 'requires a value' do
|
35
|
+
rt = AlternateIdentifier.new(type: 'URL', value: 'http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml')
|
36
|
+
expect { rt.value = nil }.to raise_error(ArgumentError)
|
37
|
+
expect(rt.value).to eq('http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml')
|
38
|
+
end
|
39
|
+
end
|
40
|
+
|
41
|
+
describe '#load_from_xml' do
|
42
|
+
it 'parses XML' do
|
43
|
+
xml_text = '<alternateIdentifier alternateIdentifierType="URL">http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml</alternateIdentifier>'
|
44
|
+
xml = REXML::Document.new(xml_text).root
|
45
|
+
id = AlternateIdentifier.load_from_xml(xml)
|
46
|
+
expect(id.type).to eq('URL')
|
47
|
+
expect(id.value).to eq('http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml')
|
48
|
+
end
|
49
|
+
end
|
50
|
+
|
51
|
+
describe '#save_to_xml' do
|
52
|
+
it 'writes XML' do
|
53
|
+
id = AlternateIdentifier.new(type: 'URL', value: 'http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml')
|
54
|
+
expected_xml = '<alternateIdentifier alternateIdentifierType="URL">http://schema.datacite.org/schema/meta/kernel-3.1/example/datacite-example-full-v3.1.xml</alternateIdentifier>'
|
55
|
+
expect(id.save_to_xml).to be_xml(expected_xml)
|
56
|
+
end
|
57
|
+
end
|
58
|
+
end
|
59
|
+
end
|
60
|
+
end
|