data_structures_rmolinari 0.4.4 → 0.5.1
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- checksums.yaml +4 -4
- data/CHANGELOG.md +11 -0
- data/README.md +98 -29
- data/ext/c_segment_tree_template/segment_tree_template.c +2 -1
- data/ext/cc.h +3879 -0
- data/ext/shared.h +33 -0
- data/lib/data_structures_rmolinari/algorithms.rb +5 -5
- data/lib/data_structures_rmolinari/c_segment_tree_template_impl.rb +3 -100
- data/lib/data_structures_rmolinari/disjoint_union.rb +2 -0
- data/lib/data_structures_rmolinari/segment_tree.rb +126 -0
- data/lib/data_structures_rmolinari/segment_tree_template.rb +3 -3
- data/lib/data_structures_rmolinari.rb +2 -67
- metadata +5 -2
data/ext/shared.h
ADDED
@@ -0,0 +1,33 @@
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#ifndef SHARED_H
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#define SHARED_H
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#include <stddef.h>
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#include "ruby.h"
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#define mShared rb_define_module("Shared")
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#define eSharedDataError rb_const_get(mShared, rb_intern_const("DataError"))
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#define eSharedInternalLogicError rb_const_get(mShared, rb_intern_const("InternalLogicError"))
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#define mDataStructuresRMolinari rb_define_module("DataStructuresRMolinari")
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//#define debug(...) printf(__VA_ARGS__)
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#define debug(...)
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/* What we might think of as vector[index]. It is assignable */
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#define lval(vector, index) (*get(vector, index))
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/*
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* Binary tree arithmetic for an implicit tree in an array, 1-based.
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*
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* TODO: into shared header
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*/
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#define TREE_ROOT 1
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size_t midpoint(size_t left, size_t right);
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size_t left_child(size_t i);
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size_t right_child(size_t i);
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/*
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* Check that a Ruby value is a non-negative Fixnum and convert it to a C unsigned long
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*/
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unsigned long checked_nonneg_fixnum(VALUE val);
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#endif
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#
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# Algorithms that use the module's data structures but don't belong as a method on one of the data structures
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module DataStructuresRMolinari::Algorithms
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include Shared
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@@ -11,12 +11,12 @@ module DataStructuresRMolinari::Algorithms
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#
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# A _maximal empty rectangle_ (MER) for P is an empty rectangle for P not properly contained in any other.
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#
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# We enumerate all maximal empty rectangles for P, yielding each as (left, right, bottom, top)
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#
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#
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# We enumerate all maximal empty rectangles for P, yielding each as (left, right, bottom, top). The algorithm is due to De, M.,
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# Maheshwari, A., Nandy, S. C., Smid, M., _An In-Place Min-max Priority Search Tree_, Computational Geometry, v46 (2013), pp
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# 310-327.
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#
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# It runs in O(m log n) time, where m is the number of MERs enumerated and n is the number of points in P. (Contructing the
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# MaxPST
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# MaxPST takes O(n log^2 n) time, but m = O(n^2) so we are still O(m log n) overall.)
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#
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# @param points [Array] an array of points in the x-y plane. Each must respond to +x+ and +y+.
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def self.maximal_empty_rectangles(points)
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@@ -3,110 +3,13 @@ require 'must_be'
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require_relative 'shared'
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require_relative 'c_segment_tree_template'
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# The
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# max) on a arbitrary subarray of a given array.
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# The underlying functionality of the Segment Tree data type, implemented in C as a Ruby extension.
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#
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#
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# Wikipedia article (https://en.wikipedia.org/wiki/Segment_tree) appears to describe a different data structure which is sometimes
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# called an "interval tree."
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#
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# For more details (and some close-to-metal analysis of run time, especially for large datasets) see
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# https://en.algorithmica.org/hpc/data-structures/segment-trees/. In particular, this shows how to do a bottom-up implementation,
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# which is faster, at least for large datasets and cache-relevant compiled code. These issues don't really apply to code written in
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# Ruby.
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#
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# This is a generic implementation, intended to allow easy configuration for concrete instances. See the parameters to the
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# initializer and the definitions of concrete realisations like MaxValSegmentTree.
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#
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# We do O(n) work to build the internal data structure at initialization. Then we answer queries in O(log n) time.
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# See SegmentTreeTemplate for more information.
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class DataStructuresRMolinari::CSegmentTreeTemplate
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# Construct a concrete instance of a Segment Tree. See details at the links above for the underlying concepts here.
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# @param combine a lambda that takes two values and munges them into a combined value.
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# - For example, if we are calculating sums over subintervals, combine.call(a, b) = a + b, while if we are doing maxima we will
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# return max(a, b).
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# - Things get more complicated when we are calculating, say, the _index_ of the maximal value in a subinterval. Now it is not
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# enough simply to store that index at each tree node, because to combine the indices from two child nodes we need to know
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# both the index of the maximal element in each child node's interval, but also the maximal values themselves, so we know
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# which one "wins" for the parent node. This affects the sort of work we need to do when combining and the value provided by
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# the +single_cell_array_val+ lambda.
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# @param single_cell_array_val a lambda that takes an index i and returns the value we need to store in the #build
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# operation for the subinterval i..i.
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# - This will often simply be the value data[i], but in some cases it will be something else. For example, when we are
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# calculating the index of the maximal value on each subinterval we need [i, data[i]] here.
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# - If +update_at+ is called later, this lambda must close over the underlying data in a way that captures the updated value.
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# @param size the size of the underlying data array, used in certain internal arithmetic.
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# @param identity the value to return when we are querying on an empty interval
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# - for sums, this will be zero; for maxima, this will be -Infinity, etc
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# (see SegmentTreeTemplate::initialize)
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def initialize(combine:, single_cell_array_val:, size:, identity:)
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# having sorted out the keyword arguments, pass them more easily to the C layer.
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c_initialize(combine, single_cell_array_val, size, identity)
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end
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end
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# A segment tree that for an array A(0...n) answers questions of the form "what is the maximum value in the subinterval A(i..j)?"
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# in O(log n) time.
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#
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# C version
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#
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# TODO: share the definition with (non-C) MasValSegmentTree. The only difference is the class of the underlying segment tree
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# template.
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module DataStructuresRMolinari
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class CMaxValSegmentTree
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extend Forwardable
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# Tell the tree that the value at idx has changed
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def_delegator :@structure, :update_at
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# @param data an object that contains values at integer indices based at 0, via +data[i]+.
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# - This will usually be an Array, but it could also be a hash or a proc.
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def initialize(data)
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@structure = CSegmentTreeTemplate.new(
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combine: ->(a, b) { [a, b].max },
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single_cell_array_val: ->(i) { data[i] },
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size: data.size,
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identity: -Shared::INFINITY
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)
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end
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# The maximum value in A(i..j).
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#
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# The arguments must be integers in 0...(A.size)
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# @return the largest value in A(i..j) or -Infinity if i > j.
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def max_on(i, j)
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@structure.query_on(i, j)
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end
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end
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# A segment tree that for an array A(0...n) answers questions of the form "what is the index of the maximal value in the
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# subinterval A(i..j)?" in O(log n) time.
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#
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# C version
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class CIndexOfMaxValSegmentTree
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extend Forwardable
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# Tell the tree that the value at idx has changed
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def_delegator :@structure, :update_at
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# @param (see MaxValSegmentTree#initialize)
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def initialize(data)
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@structure = CSegmentTreeTemplate.new(
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combine: ->(p1, p2) { p1[1] >= p2[1] ? p1 : p2 },
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single_cell_array_val: ->(i) { [i, data[i]] },
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size: data.size,
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identity: nil
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)
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end
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# The index of the maximum value in A(i..j)
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#
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# The arguments must be integers in 0...(A.size)
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# @return (Integer, nil) the index of the largest value in A(i..j) or +nil+ if i > j.
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# - If there is more than one entry with that value, return one the indices. There is no guarantee as to which one.
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# - Return +nil+ if i > j
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def index_of_max_val_on(i, j)
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@structure.query_on(i, j)&.first # discard the value part of the pair, which is a bookkeeping
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end
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end
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end
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require_relative 'shared'
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# A namespace to hold the various bits and bobs related to the SegmentTree implementation
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module DataStructuresRMolinari::SegmentTree
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end
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require_relative 'segment_tree_template' # Ruby implementation of the generic API
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require_relative 'c_segment_tree_template' # C implementation of the generic API
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# Segment Tree: various concrete implementations
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#
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# There is an excellent description of the data structure at https://cp-algorithms.com/data_structures/segment_tree.html. The
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# Wikipedia article (https://en.wikipedia.org/wiki/Segment_tree) appears to describe a different data structure which is sometimes
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# called an "interval tree."
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#
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# For more details (and some close-to-metal analysis of run time, especially for large datasets) see
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# https://en.algorithmica.org/hpc/data-structures/segment-trees/. In particular, this shows how to do a bottom-up implementation,
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# which is faster, at least for large datasets and cache-relevant compiled code. These issues don't really apply to code written in
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# Ruby.
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#
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# Here we provide several concrete segment tree implementations built on top of the template (generic) versions. Each instance is
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# backed either by the pure Ruby SegmentTreeTemplate or its C-based sibling CSegmentTreeTemplate
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module DataStructuresRMolinari
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module SegmentTree
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# A convenience method to construct a Segment Tree that, for a given array A(0...size), answers questions of the kind given by
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# operation, using the template written in lang
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#
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# - @param data: the array A.
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# - It must respond to +#size+ and to +#[]+ with non-negative integer arguments.
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# - @param operation: a supported "style" of Segment Tree
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# - for now, must be one of these (but you can write your own concrete version)
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# - +:max+: implementing +max_on(i, j)+, returning the maximum value in A(i..j)
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# - +:index_of_max+: implementing +index_of_max_val_on(i, j)+, returning an index corresponding to the maximum value in
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# A(i..j).
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# - @param lang: the language in which the underlying "template" is written
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# - +:c+ or +:ruby+
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# - the C version will run faster but for now may be buggier and harder to debug
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module_function def construct(data, operation, lang)
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operation.must_be_in [:max, :index_of_max]
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lang.must_be_in [:ruby, :c]
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klass = operation == :max ? MaxValSegmentTree : IndexOfMaxValSegmentTree
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template = lang == :ruby ? SegmentTreeTemplate : CSegmentTreeTemplate
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klass.new(template, data)
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end
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# A segment tree that for an array A(0...n) answers questions of the form "what is the maximum value in the subinterval A(i..j)?"
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# in O(log n) time.
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class MaxValSegmentTree
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extend Forwardable
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# Tell the tree that the value at idx has changed
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def_delegator :@structure, :update_at
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# @param template_klass the "template" class that provides the generic implementation of the Segment Tree functionality.
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# @param data an object that contains values at integer indices based at 0, via +data[i]+.
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# - This will usually be an Array, but it could also be a hash or a proc.
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def initialize(template_klass, data)
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data.must_be_a Enumerable
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@structure = template_klass.new(
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combine: ->(a, b) { [a, b].max },
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single_cell_array_val: ->(i) { data[i] },
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size: data.size,
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identity: -Shared::INFINITY
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)
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end
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+
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# The maximum value in A(i..j).
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#
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# The arguments must be integers in 0...(A.size)
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# @return the largest value in A(i..j) or -Infinity if i > j.
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def max_on(i, j)
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@structure.query_on(i, j)
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end
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end
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+
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# A segment tree that for an array A(0...n) answers questions of the form "what is the index of the maximal value in the
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# subinterval A(i..j)?" in O(log n) time.
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class IndexOfMaxValSegmentTree
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extend Forwardable
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+
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# Tell the tree that the value at idx has changed
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def_delegator :@structure, :update_at
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# @param (see MaxValSegmentTree#initialize)
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def initialize(template_klass, data)
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data.must_be_a Enumerable
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@structure = template_klass.new(
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combine: ->(p1, p2) { p1[1] >= p2[1] ? p1 : p2 },
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single_cell_array_val: ->(i) { [i, data[i]] },
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size: data.size,
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identity: nil
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)
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end
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# The index of the maximum value in A(i..j)
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#
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# The arguments must be integers in 0...(A.size)
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# @return (Integer, nil) the index of the largest value in A(i..j) or +nil+ if i > j.
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# - If there is more than one entry with that value, return one the indices. There is no guarantee as to which one.
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# - Return +nil+ if i > j
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def index_of_max_val_on(i, j)
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@structure.query_on(i, j)&.first # discard the value part of the pair, which is a bookkeeping
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end
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end
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+
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# The underlying functionality of the Segment Tree data type, implemented in C as a Ruby extension.
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#
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# See SegmentTreeTemplate for more information.
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#
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# Implementation note
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#
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# The functionality is entirely written in C. But we write the constructor in Ruby because keyword arguments are difficult to
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# parse on the C side.
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class CSegmentTreeTemplate
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# (see SegmentTreeTemplate::initialize)
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def initialize(combine:, single_cell_array_val:, size:, identity:)
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# having sorted out the keyword arguments, pass them more easily to the C layer.
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c_initialize(combine, single_cell_array_val, size, identity)
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end
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end
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end
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end
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@@ -1,7 +1,7 @@
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require_relative 'shared'
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2
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3
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#
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# max) on a arbitrary subarray of a given array.
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# A generic implementation of Segment Tree, which can be used for various interval-related purposes, like efficiently finding the
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# sum (or min or max) on a arbitrary subarray of a given array.
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5
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#
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6
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# There is an excellent description of the data structure at https://cp-algorithms.com/data_structures/segment_tree.html. The
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7
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# Wikipedia article (https://en.wikipedia.org/wiki/Segment_tree) appears to describe a different data structure which is sometimes
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@@ -16,7 +16,7 @@ require_relative 'shared'
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# initializer and the definitions of concrete realisations like MaxValSegmentTree.
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#
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# We do O(n) work to build the internal data structure at initialization. Then we answer queries in O(log n) time.
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class DataStructuresRMolinari::SegmentTreeTemplate
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class DataStructuresRMolinari::SegmentTree::SegmentTreeTemplate
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include Shared
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include Shared::BinaryTreeArithmetic
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@@ -14,77 +14,12 @@ require_relative 'data_structures_rmolinari/algorithms'
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require_relative 'data_structures_rmolinari/disjoint_union'
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require_relative 'data_structures_rmolinari/c_disjoint_union' # version as a C extension
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require_relative 'data_structures_rmolinari/
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require_relative 'data_structures_rmolinari/c_segment_tree_template_impl'
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+
require_relative 'data_structures_rmolinari/segment_tree'
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require_relative 'data_structures_rmolinari/heap'
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require_relative 'data_structures_rmolinari/max_priority_search_tree'
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require_relative 'data_structures_rmolinari/min_priority_search_tree'
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module DataStructuresRMolinari
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-
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# Concrete instances of Segment Tree
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#
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# @todo consider moving these into generic_segment_tree.rb and renaming that file
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# A segment tree that for an array A(0...n) answers questions of the form "what is the maximum value in the subinterval A(i..j)?"
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# in O(log n) time.
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class MaxValSegmentTree
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extend Forwardable
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-
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# Tell the tree that the value at idx has changed
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def_delegator :@structure, :update_at
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-
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# @param data an object that contains values at integer indices based at 0, via +data[i]+.
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# - This will usually be an Array, but it could also be a hash or a proc.
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def initialize(data)
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data.must_be_a Enumerable
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-
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@structure = SegmentTreeTemplate.new(
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combine: ->(a, b) { [a, b].max },
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single_cell_array_val: ->(i) { data[i] },
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size: data.size,
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identity: -Shared::INFINITY
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)
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end
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# The maximum value in A(i..j).
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#
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# The arguments must be integers in 0...(A.size)
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# @return the largest value in A(i..j) or -Infinity if i > j.
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def max_on(i, j)
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@structure.query_on(i, j)
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end
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end
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# A segment tree that for an array A(0...n) answers questions of the form "what is the index of the maximal value in the
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# subinterval A(i..j)?" in O(log n) time.
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class IndexOfMaxValSegmentTree
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extend Forwardable
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# Tell the tree that the value at idx has changed
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def_delegator :@structure, :update_at
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# @param (see MaxValSegmentTree#initialize)
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def initialize(data)
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data.must_be_a Enumerable
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@structure = SegmentTreeTemplate.new(
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combine: ->(p1, p2) { p1[1] >= p2[1] ? p1 : p2 },
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single_cell_array_val: ->(i) { [i, data[i]] },
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size: data.size,
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identity: nil
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)
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end
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# The index of the maximum value in A(i..j)
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#
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# The arguments must be integers in 0...(A.size)
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# @return (Integer, nil) the index of the largest value in A(i..j) or +nil+ if i > j.
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# - If there is more than one entry with that value, return one the indices. There is no guarantee as to which one.
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# - Return +nil+ if i > j
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def index_of_max_val_on(i, j)
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@structure.query_on(i, j)&.first # discard the value part of the pair, which is a bookkeeping
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end
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end
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# Add things here if needed
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end
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metadata
CHANGED
@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
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name: data_structures_rmolinari
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version: !ruby/object:Gem::Version
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version: 0.
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version: 0.5.1
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platform: ruby
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authors:
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- Rory Molinari
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2023-02-
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+
date: 2023-02-03 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: must_be
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@@ -89,7 +89,9 @@ files:
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- ext/c_disjoint_union/extconf.rb
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- ext/c_segment_tree_template/extconf.rb
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- ext/c_segment_tree_template/segment_tree_template.c
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+
- ext/cc.h
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- ext/shared.c
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- ext/shared.h
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- lib/data_structures_rmolinari.rb
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- lib/data_structures_rmolinari/algorithms.rb
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- lib/data_structures_rmolinari/c_segment_tree_template_impl.rb
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@@ -97,6 +99,7 @@ files:
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- lib/data_structures_rmolinari/heap.rb
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- lib/data_structures_rmolinari/max_priority_search_tree.rb
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- lib/data_structures_rmolinari/min_priority_search_tree.rb
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102
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+
- lib/data_structures_rmolinari/segment_tree.rb
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- lib/data_structures_rmolinari/segment_tree_template.rb
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- lib/data_structures_rmolinari/shared.rb
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homepage: https://github.com/rmolinari/data_structures
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