d_heap 0.4.0 → 0.5.0
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- checksums.yaml +4 -4
- data/CHANGELOG.md +19 -2
- data/Gemfile +4 -0
- data/Gemfile.lock +7 -1
- data/README.md +131 -107
- data/benchmarks/perf.rb +29 -0
- data/benchmarks/push_n.yml +6 -3
- data/benchmarks/push_n_pop_n.yml +4 -0
- data/benchmarks/push_pop.yml +6 -3
- data/benchmarks/stackprof.rb +31 -0
- data/docs/benchmarks-2.txt +63 -40
- data/docs/benchmarks-mem.txt +39 -0
- data/docs/benchmarks.txt +337 -265
- data/ext/d_heap/d_heap.c +202 -304
- data/ext/d_heap/d_heap.h +10 -4
- data/ext/d_heap/extconf.rb +8 -1
- data/lib/d_heap.rb +24 -0
- data/lib/d_heap/benchmarks.rb +2 -1
- data/lib/d_heap/benchmarks/benchmarker.rb +3 -0
- data/lib/d_heap/benchmarks/implementations.rb +86 -32
- data/lib/d_heap/version.rb +1 -1
- metadata +5 -2
data/ext/d_heap/d_heap.h
CHANGED
@@ -11,11 +11,17 @@
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11
11
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// comparisons as d gets further from 4.
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12
12
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#define DHEAP_MAX_D 32
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13
13
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14
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-
|
15
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-
#define DHEAP_MAX_SIZE (LONG_MAX / (int)sizeof(long double))
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14
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+
typedef long double SCORE;
|
16
15
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|
17
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-
|
18
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-
|
16
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+
typedef struct dheap_entry {
|
17
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+
SCORE score;
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18
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+
VALUE value;
|
19
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+
} ENTRY;
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20
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+
|
21
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+
#define DHEAP_DEFAULT_SIZE 256
|
22
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+
#define DHEAP_MAX_SIZE (LONG_MAX / (int)sizeof(ENTRY))
|
23
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+
|
24
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+
#define DHEAP_CAPA_INCR_MAX (10 * 1024 * 1024 / (int)sizeof(ENTRY))
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19
25
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20
26
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VALUE rb_cDHeap;
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21
27
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data/ext/d_heap/extconf.rb
CHANGED
@@ -4,6 +4,14 @@ require "mkmf"
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4
4
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5
5
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# For testing in CI (because I don't otherwise have easy access to Mac OS):
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6
6
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# $CFLAGS << " -D__D_HEAP_DEBUG" if /darwin/ =~ RUBY_PLATFORM
|
7
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+
# $CFLAGS << " -debug inline-debug-info "
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8
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+
# $CFLAGS << " -g -ginline-points "
|
9
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+
# $CFLAGS << " -fno-omit-frame-pointer "
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10
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+
|
11
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+
# CONFIG["debugflags"] << " -ggdb3 -gstatement-frontiers -ginline-points "
|
12
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+
CONFIG["optflags"] << " -O3 "
|
13
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+
CONFIG["optflags"] << " -fno-omit-frame-pointer "
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14
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+
CONFIG["warnflags"] << " -Werror"
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7
15
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8
16
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have_func "rb_gc_mark_movable" # since ruby-2.7
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9
17
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@@ -12,5 +20,4 @@ check_sizeof("unsigned long long")
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12
20
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check_sizeof("long double")
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13
21
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have_macro("LDBL_MANT_DIG", "float.h")
|
14
22
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|
15
|
-
CONFIG["warnflags"] << " -Werror"
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16
23
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create_makefile("d_heap/d_heap")
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data/lib/d_heap.rb
CHANGED
@@ -14,11 +14,35 @@ require "d_heap/version"
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|
14
14
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# worst-case time complexity.
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15
15
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#
|
16
16
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class DHeap
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17
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+
alias deq pop
|
18
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+
alias enq push
|
19
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+
alias first peek
|
20
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+
alias pop_below pop_lt
|
21
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+
|
22
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+
alias length size
|
23
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+
alias count size
|
24
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+
|
17
25
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# ruby 3.0+ (2.x can just use inherited initialize_clone)
|
18
26
|
if Object.instance_method(:initialize_clone).arity == -1
|
27
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+
# @!visibility private
|
19
28
|
def initialize_clone(other, freeze: nil)
|
20
29
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__init_clone__(other, freeze ? true : freeze)
|
21
30
|
end
|
22
31
|
end
|
23
32
|
|
33
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+
# Consumes the heap by popping each minumum value until it is empty.
|
34
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+
#
|
35
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+
# If you want to iterate over the heap without consuming it, you will need to
|
36
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+
# first call +#dup+
|
37
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+
#
|
38
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+
# @yieldparam value [Object] each value that would be popped
|
39
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+
#
|
40
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+
# @return [Enumerator] if no block is given
|
41
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+
# @return [nil] if a block is given
|
42
|
+
def each_pop
|
43
|
+
return to_enum(__method__) unless block_given?
|
44
|
+
yield pop until empty?
|
45
|
+
nil
|
46
|
+
end
|
47
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+
|
24
48
|
end
|
data/lib/d_heap/benchmarks.rb
CHANGED
@@ -93,7 +93,7 @@ module DHeap::Benchmarks
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|
93
93
|
include Randomness
|
94
94
|
include Scenarios
|
95
95
|
|
96
|
-
def initq(klass, count = 0)
|
96
|
+
def initq(klass, count = 0, clear: false)
|
97
97
|
queue = klass.new
|
98
98
|
while 0 < count
|
99
99
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queue << @dheap_bm_random_vals.fetch(
|
@@ -101,6 +101,7 @@ module DHeap::Benchmarks
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|
101
101
|
)
|
102
102
|
count -= 1
|
103
103
|
end
|
104
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+
queue.clear if clear
|
104
105
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queue
|
105
106
|
end
|
106
107
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@@ -87,6 +87,9 @@ module DHeap::Benchmarks
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87
87
|
--runner ips_zero_fail
|
88
88
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benchmarks/#{file}.yml
|
89
89
|
]
|
90
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+
if file == "push_n"
|
91
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+
cmd << "--filter" << /dheap|\bstl\b|\bbsearch\b|\brb_heap\b/.to_s
|
92
|
+
end
|
90
93
|
env = ENV.to_h.merge(
|
91
94
|
"BENCH_N" => size.to_s,
|
92
95
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"RUBYLIB" => File.expand_path("../..", __dir__),
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@@ -1,13 +1,19 @@
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1
1
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# frozen_string_literal: true
|
2
2
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|
3
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+
require "fc"
|
4
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+
|
3
5
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module DHeap::Benchmarks
|
4
6
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|
5
7
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# base class for example priority queues
|
6
8
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class ExamplePriorityQueue
|
7
9
|
attr_reader :a
|
8
10
|
|
9
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-
|
11
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+
# quick initialization by simply sorting the array once.
|
12
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+
def initialize(count = nil, &block)
|
10
13
|
@a = []
|
14
|
+
return unless count
|
15
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+
count.times {|i| @a << block.call(i) }
|
16
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+
@a.sort!
|
11
17
|
end
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12
18
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|
13
19
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def clear
|
@@ -98,70 +104,118 @@ module DHeap::Benchmarks
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|
98
104
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# rubocop:disable Metrics/MethodLength, Metrics/AbcSize
|
99
105
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class RbHeap < ExamplePriorityQueue
|
100
106
|
|
101
|
-
def <<(
|
102
|
-
raise ArgumentError unless
|
103
|
-
@a.push(
|
107
|
+
def <<(value)
|
108
|
+
raise ArgumentError unless value
|
109
|
+
@a.push(value)
|
104
110
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# shift up
|
105
111
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index = @a.size - 1
|
106
112
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while 0 < index # rubocop:disable Style/NumericPredicate
|
107
113
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parent_index = (index - 1) / 2
|
108
|
-
|
109
|
-
|
114
|
+
parent_value = @a[parent_index]
|
115
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+
break if parent_value <= value
|
116
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+
@a[index] = parent_value
|
110
117
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index = parent_index
|
111
|
-
@a[index] = score
|
112
|
-
# check_heap!(index)
|
113
118
|
end
|
114
|
-
|
119
|
+
@a[index] = value
|
120
|
+
# dbg "__push__(%p)" % [value]
|
121
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+
# check_heap!(index)
|
115
122
|
end
|
116
123
|
|
117
124
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def pop
|
118
125
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return if @a.empty?
|
119
126
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popped = @a.first
|
120
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-
|
121
|
-
@a.pop
|
122
|
-
# shift down
|
123
|
-
index = 0
|
127
|
+
value = @a.pop
|
124
128
|
last_index = @a.size - 1
|
125
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-
|
129
|
+
last_parent = (last_index - 1) / 2
|
130
|
+
return popped unless 0 <= last_index
|
131
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+
|
132
|
+
# sift down from 0
|
133
|
+
index = 0
|
134
|
+
child_index = 1
|
135
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+
while index <= last_parent
|
136
|
+
child_value = @a[child_index]
|
126
137
|
# select min child
|
127
|
-
if child_index < last_index
|
128
|
-
child_index
|
138
|
+
if child_index < last_index
|
139
|
+
other_child_index = child_index + 1
|
140
|
+
other_child_value = @a[other_child_index]
|
141
|
+
if other_child_value < child_value
|
142
|
+
child_value = other_child_value
|
143
|
+
child_index = other_child_index
|
144
|
+
end
|
129
145
|
end
|
130
|
-
break if
|
131
|
-
@a[index] =
|
146
|
+
break if value <= child_value
|
147
|
+
@a[index] = child_value
|
132
148
|
index = child_index
|
133
|
-
|
149
|
+
child_index = index * 2 + 1
|
134
150
|
end
|
151
|
+
@a[index] = value
|
152
|
+
|
135
153
|
popped
|
136
154
|
end
|
137
155
|
|
138
156
|
private
|
139
157
|
|
140
|
-
def check_heap!(idx
|
141
|
-
|
142
|
-
|
143
|
-
|
144
|
-
|
145
|
-
|
146
|
-
|
147
|
-
|
148
|
-
|
149
|
-
|
150
|
-
|
151
|
-
raise "#{
|
158
|
+
def check_heap!(idx)
|
159
|
+
check_heap_up!(idx)
|
160
|
+
check_heap_dn!(idx)
|
161
|
+
end
|
162
|
+
|
163
|
+
# compares index to its parent
|
164
|
+
def check_heap_at!(idx)
|
165
|
+
value = @a[idx]
|
166
|
+
unless idx <= 0
|
167
|
+
pidx = (idx - 1) / 2
|
168
|
+
pval = @a[pidx]
|
169
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+
raise "@a[#{idx}] == #{value}, #{pval} > #{value}" if pval > value
|
152
170
|
end
|
153
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-
|
171
|
+
value
|
172
|
+
end
|
173
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+
|
174
|
+
def check_heap_up!(idx)
|
175
|
+
return if idx <= 0
|
176
|
+
pidx = (idx - 1) / 2
|
177
|
+
check_heap_at!(pidx)
|
178
|
+
check_heap_up!(pidx)
|
179
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+
end
|
180
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+
|
181
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+
def check_heap_dn!(idx)
|
182
|
+
return unless @a.size <= idx
|
183
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+
check_heap_at!(idx)
|
184
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+
check_heap_down!(idx * 2 + 1)
|
185
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+
check_heap_down!(idx * 2 + 2)
|
154
186
|
end
|
155
187
|
|
156
188
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end
|
157
189
|
# rubocop:enable Metrics/MethodLength, Metrics/AbcSize
|
158
190
|
|
191
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+
# minor adjustments to the "priority_queue_cxx" gem, to match the API
|
192
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+
class CppSTL
|
193
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+
|
194
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+
def initialize
|
195
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+
clear
|
196
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+
end
|
197
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+
|
198
|
+
def <<(value); @q.push(value, value) end
|
199
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+
|
200
|
+
def clear
|
201
|
+
@q = FastContainers::PriorityQueue.new(:min)
|
202
|
+
end
|
203
|
+
|
204
|
+
def pop
|
205
|
+
@q.pop
|
206
|
+
rescue RuntimeError
|
207
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+
nil
|
208
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+
end
|
209
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+
|
210
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+
end
|
211
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+
|
159
212
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# Different duck-typed priority queue implemenations
|
160
213
|
IMPLEMENTATIONS = [
|
161
214
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OpenStruct.new(name: " push and resort", klass: Sorting).freeze,
|
162
215
|
OpenStruct.new(name: " find min + del", klass: FindMin).freeze,
|
163
216
|
OpenStruct.new(name: "bsearch + insert", klass: BSearch).freeze,
|
164
217
|
OpenStruct.new(name: "ruby binary heap", klass: RbHeap).freeze,
|
218
|
+
OpenStruct.new(name: "C++STL PriorityQ", klass: CppSTL).freeze,
|
165
219
|
OpenStruct.new(name: "quaternary DHeap", klass: DHeap).freeze,
|
166
220
|
].freeze
|
167
221
|
|
data/lib/d_heap/version.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: d_heap
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.
|
4
|
+
version: 0.5.0
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- nicholas a. evans
|
8
8
|
autorequire:
|
9
9
|
bindir: exe
|
10
10
|
cert_chain: []
|
11
|
-
date: 2021-01-
|
11
|
+
date: 2021-01-17 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: benchmark_driver
|
@@ -60,9 +60,11 @@ files:
|
|
60
60
|
- LICENSE.txt
|
61
61
|
- README.md
|
62
62
|
- Rakefile
|
63
|
+
- benchmarks/perf.rb
|
63
64
|
- benchmarks/push_n.yml
|
64
65
|
- benchmarks/push_n_pop_n.yml
|
65
66
|
- benchmarks/push_pop.yml
|
67
|
+
- benchmarks/stackprof.rb
|
66
68
|
- bin/bench_n
|
67
69
|
- bin/benchmark-driver
|
68
70
|
- bin/benchmarks
|
@@ -74,6 +76,7 @@ files:
|
|
74
76
|
- bin/setup
|
75
77
|
- d_heap.gemspec
|
76
78
|
- docs/benchmarks-2.txt
|
79
|
+
- docs/benchmarks-mem.txt
|
77
80
|
- docs/benchmarks.txt
|
78
81
|
- docs/profile.txt
|
79
82
|
- ext/d_heap/d_heap.c
|