cwords 0.1.9
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- data/LICENSE +28 -0
- data/README +110 -0
- data/bin/cwords +17 -0
- data/bin/cwords_mkdb +16 -0
- data/lib/ushuffle.jar +0 -0
- data/lib/wordRS-lib.rb +169 -0
- data/resources/genemap.tsv +18956 -0
- data/resources/word_annotation.tsv +1801 -0
- data/scripts/cluster_words.rb +394 -0
- data/scripts/complementary_words.rb +205 -0
- data/scripts/cwords.rb +430 -0
- data/scripts/cwords_mkdb.rb +92 -0
- metadata +102 -0
metadata
ADDED
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@@ -0,0 +1,102 @@
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--- !ruby/object:Gem::Specification
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name: cwords
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version: !ruby/object:Gem::Version
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prerelease: false
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segments:
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- 0
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- 9
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version: 0.1.9
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platform: ruby
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authors:
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- Anders Jacobsen
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2010-03-12 00:00:00 +01:00
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default_executable:
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- bin/cwords
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dependencies:
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- !ruby/object:Gem::Dependency
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name: progressbar
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prerelease: false
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requirement: &id001 !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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segments:
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- 0
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- 9
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- 0
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version: 0.9.0
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type: :runtime
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version_requirements: *id001
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- !ruby/object:Gem::Dependency
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name: peach
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prerelease: false
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requirement: &id002 !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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segments:
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- 0
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- 2
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- 0
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version: 0.2.0
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type: :runtime
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version_requirements: *id002
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description: Word correlation analysis in ranked nucleotide sequences (bioinformatics)
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email: andersmbj@gmail.com
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executables:
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- cwords
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- cwords_mkdb
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extensions: []
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extra_rdoc_files: []
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files:
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- README
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- LICENSE
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- bin/cwords
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- bin/cwords_mkdb
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- lib/ushuffle.jar
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- lib/wordRS-lib.rb
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- resources/genemap.tsv
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- resources/word_annotation.tsv
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- scripts/cwords.rb
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- scripts/cwords_mkdb.rb
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- scripts/cluster_words.rb
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- scripts/complementary_words.rb
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has_rdoc: true
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homepage: https://github.com/andersjacobsen/cWords/
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licenses: []
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post_install_message:
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rdoc_options: []
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require_paths:
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- lib
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required_ruby_version: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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segments:
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- 0
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version: "0"
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required_rubygems_version: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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segments:
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- 0
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version: "0"
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requirements: []
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rubyforge_project:
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rubygems_version: 1.3.6
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signing_key:
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specification_version: 3
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summary: Word correlation analysis
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101
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test_files: []
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102
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