curation_concerns-models 0.1.0

checksums.yaml

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data/.gitignore

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+*.gem
+*.rbc
+.bundle
+.config
+.yardoc
+Gemfile.lock
+InstalledFiles
+_yardoc
+coverage
+doc/
+lib/bundler/man
+pkg
+rdoc
+spec/reports
+test/tmp
+test/version_tmp
+tmp

data/Gemfile

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+source 'https://rubygems.org'
+
+# Specify your gem's dependencies in curation_concerns-models.gemspec
+gemspec

data/LICENSE.md

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data/README.md

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+# CurationConcerns::Models
+
+Models extracted from worthwhile-models and sufia-models.
+
+## Dependencies
+
+### FITS 0.6.2
+
+To install FITS:
+ * Go to http://projects.iq.harvard.edu/fits/downloads, download __fits-0.6.2.zip__, and unpack it somewhere on your machine. You can also install FITS on OSX with homebrew: `brew install fits` (you may also have to create a symlink from fits.sh -> fits in the next step).
+ * Mark fits.sh as executable (chmod a+x fits.sh)
+ * Run "fits.sh -h" from the command line and see a help message to ensure FITS is properly installed
+ * Give your app access to FITS by:
+     * Adding the full fits.sh path to your PATH (e.g., in your .bash_profile), OR
+     * Changing config/initializers/sufia.rb to point to your FITS location: config.fits_path = "/<your full path>/fits.sh"
+
+
+
+## Installation
+
+Add this line to your application's Gemfile:
+
+    gem 'curation_concerns-models'
+
+And then execute:
+
+    $ bundle
+
+Or install it yourself as:
+
+    $ gem install curation_concerns-models
+
+## Usage
+
+
+## Contributing
+
+1. Fork it
+2. Create your feature branch (`git checkout -b my-new-feature`)
+3. Commit your changes (`git commit -am 'Add some feature'`)
+4. Push to the branch (`git push origin my-new-feature`)
+5. Create new Pull Request

data/Rakefile

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+require "bundler/gem_tasks"

data/app/actors/concerns/curation_concerns/manages_embargoes_actor.rb

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+module CurationConcerns
+  #  To use this module, include it in your Actor class
+  #  and then add its interpreters wherever you want them to run.
+  #  They should be called _before_ apply_attributes is called because
+  #  they intercept values in the attributes Hash.
+  #
+  #  @example
+  #  class MyActorClass < BaseActor
+  #     include Worthwile::ManagesEmbargoesActor
+  #
+  #     def create
+  #       interpret_visibility && super && copy_visibility
+  #     end
+  #
+  #     def update
+  #       interpret_visibility && super && copy_visibility
+  #     end
+  #  end
+  #
+  module ManagesEmbargoesActor
+    extend ActiveSupport::Concern
+
+    # Interprets embargo & lease visibility if necessary
+    # returns false if there are any errors
+    def interpret_visibility(attributes=self.attributes)
+      should_continue = interpret_embargo_visibility(attributes) && interpret_lease_visibility(attributes)
+      if attributes[:visibility]
+        curation_concern.visibility = attributes[:visibility]
+      end
+      return should_continue
+    end
+
+    # If user has set visibility to embargo, interprets the relevant information and applies it
+    # Returns false if there are any errors and sets an error on the curation_concern
+    def interpret_embargo_visibility(attributes=self.attributes)
+      if attributes[:visibility] == Hydra::AccessControls::AccessRight::VISIBILITY_TEXT_VALUE_EMBARGO
+        if !attributes[:embargo_release_date]
+          curation_concern.errors.add(:visibility, 'When setting visibility to "embargo" you must also specify embargo release date.')
+          should_continue = false
+        else
+          attributes.delete(:visibility)
+          curation_concern.apply_embargo(attributes[:embargo_release_date], attributes.delete(:visibility_during_embargo),
+                                         attributes.delete(:visibility_after_embargo))
+          if curation_concern.embargo
+            curation_concern.embargo.save  # See https://github.com/projecthydra/hydra-head/issues/226
+          end
+          @needs_to_copy_visibility = true
+          should_continue = true
+        end
+      else
+        should_continue = true
+        # clear embargo_release_date if it isn't being used. Otherwise it sets the embargo_date
+        # even though they didn't select embargo on the form.
+        attributes.delete(:embargo_release_date)
+      end
+
+      attributes.delete(:visibility_during_embargo)
+      attributes.delete(:visibility_after_embargo)
+
+      return should_continue
+    end
+
+    # If user has set visibility to lease, interprets the relevant information and applies it
+    # Returns false if there are any errors and sets an error on the curation_concern
+    def interpret_lease_visibility(attributes=self.attributes)
+      if attributes[:visibility] == Hydra::AccessControls::AccessRight::VISIBILITY_TEXT_VALUE_LEASE
+        if !attributes[:lease_expiration_date]
+          curation_concern.errors.add(:visibility, 'When setting visibility to "lease" you must also specify lease expiration date.')
+          should_continue = false
+        else
+          curation_concern.apply_lease(attributes[:lease_expiration_date], attributes.delete(:visibility_during_lease),
+                                         attributes.delete(:visibility_after_lease))
+          if curation_concern.lease
+            curation_concern.lease.save  # See https://github.com/projecthydra/hydra-head/issues/226
+          end
+          @needs_to_copy_visibility = true
+          attributes.delete(:visibility)
+          should_continue = true
+        end
+      else
+        # clear lease_expiration_date if it isn't being used. Otherwise it sets the lease_expiration
+        # even though they didn't select lease on the form.
+        attributes.delete(:lease_expiration_date)
+        should_continue = true
+      end
+
+      attributes.delete(:visibility_during_lease)
+      attributes.delete(:visibility_after_lease)
+
+      return should_continue
+    end
+
+
+    def copy_visibility
+      CurationConcerns.queue.push(VisibilityCopyWorker.new(curation_concern.id)) if @needs_to_copy_visibility
+      true
+    end
+  end
+end

data/app/actors/curation_concerns/base_actor.rb

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+
+module CurationConcerns
+  # The CurationConcern base actor should respond to three primary actions:
+  # * #create
+  # * #update
+  # * #delete
+  class BaseActor
+    attr_reader :curation_concern, :user, :attributes, :cloud_resources
+    def initialize(curation_concern, user, input_attributes)
+      @curation_concern = curation_concern
+      @user = user
+      @attributes = input_attributes.dup.with_indifferent_access
+      @visibility = attributes[:visibility]
+      @cloud_resources= attributes.delete(:cloud_resources.to_s)
+    end
+
+    attr_reader :visibility
+    protected :visibility
+
+    delegate :visibility_changed?, to: :curation_concern
+
+    def create
+      apply_creation_data_to_curation_concern
+      apply_save_data_to_curation_concern
+      save
+    end
+
+    def update
+      apply_update_data_to_curation_concern
+      apply_save_data_to_curation_concern
+      save
+    end
+
+    protected
+    def apply_creation_data_to_curation_concern
+      apply_depositor_metadata
+      apply_deposit_date
+    end
+
+    def apply_update_data_to_curation_concern
+      true
+    end
+
+    def apply_depositor_metadata
+      curation_concern.apply_depositor_metadata(user.user_key)
+      curation_concern.edit_users += [user.user_key]
+    end
+
+    def apply_deposit_date
+      curation_concern.date_uploaded = Date.today
+    end
+
+    def save
+      curation_concern.save
+    end
+
+    def apply_save_data_to_curation_concern
+      attributes[:rights] = Array(attributes[:rights]) if attributes.key? :rights
+      remove_blank_attributes!
+      curation_concern.attributes = attributes.symbolize_keys
+      curation_concern.date_modified = Date.today
+    end
+
+    def attach_file(generic_file, file_to_attach)
+      ActiveSupport::Deprecation.warn("removing #{self.class}#attach_file, use CurationConcern.attach_file instead")
+      CurationConcern.attach_file(generic_file, user, file_to_attach)
+    end
+
+    # If any attributes are blank remove them
+    # e.g.:
+    #   self.attributes = { 'title' => ['first', 'second', ''] }
+    #   remove_blank_attributes!
+    #   self.attributes
+    # => { 'title' => ['first', 'second'] }
+    def remove_blank_attributes!
+      multivalued_form_attributes.each_with_object(attributes) do |(k, v), h|
+        if v.instance_of? Array
+          h[k] = v.select(&:present?)
+        else
+          h[k] = v
+        end
+      end
+    end
+
+    # Return the hash of attributes that are multivalued and not uploaded files
+    def multivalued_form_attributes
+      attributes.select {|_, v| v.respond_to?(:select) && !v.respond_to?(:read) }
+    end
+  end
+end

data/app/actors/curation_concerns/generic_file_actor.rb

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+module CurationConcerns
+  # Actions are decoupled from controller logic so that they may be called from a controller or a background job.
+  class GenericFileActor
+    include CurationConcerns::ManagesEmbargoesActor
+
+    attr_reader :generic_file, :user, :attributes, :curation_concern
+
+    def initialize(generic_file, user)
+      # we're setting attributes and curation_concern to bridge the difference
+      # between CurationConcerns::GenericFileActor and ManagesEmbargoesActor
+      @curation_concern = generic_file
+      @generic_file = generic_file
+      @user = user
+    end
+
+    # Adds the appropriate metadata, visibility and relationships to generic_file
+    #
+    # *Note*: In past versions of Sufia this method did not perform a save because it is mainly used in conjunction with
+    # create_content, which also performs a save.  However, due to the relationship between Hydra::PCDM objects,
+    # we have to save both the parent work and the generic_file in order to record the "metadata" relationship
+    # between them.
+    # @param [String] batch_id id of the batch that the file was uploaded within
+    # @param [String] work_id id of the parent work that will contain the generic_file.
+    # @param [Hash] generic_file_params specifying the visibility, lease and/or embargo of the generic file.  If you don't provide at least one of visibility, embargo_release_date or lease_expiration_date, visibility will be copied from the parent.
+
+    def create_metadata(batch_id, work_id, generic_file_params={})
+      generic_file.apply_depositor_metadata(user)
+      time_in_utc = DateTime.now.new_offset(0)
+      generic_file.date_uploaded = time_in_utc
+      generic_file.date_modified = time_in_utc
+      generic_file.creator = [user.name]
+      # TODO: Remove this? see https://github.com/projecthydra-labs/curation_concerns/issues/27
+      if batch_id && generic_file.respond_to?(:batch_id=)
+        generic_file.batch_id = batch_id
+      else
+        ActiveFedora::Base.logger.warn "unable to find batch to attach to"
+      end
+
+      unless work_id.blank?
+        work = ActiveFedora::Base.find(work_id)
+
+        if !((generic_file_params || {}).keys  & ["visibility", "embargo_release_date", "lease_expiration_date"]).empty?
+          interpret_visibility generic_file_params
+        else
+          copy_visibility(work, generic_file)
+        end
+        work.generic_files << generic_file
+        # Save the work so the association between the work and the generic_file is persisted (head_id)
+        work.save
+      end
+      yield(generic_file) if block_given?
+    end
+
+    def create_content(file)
+      # Tell UploadFileToGenericFile service to skip versioning because versions will be minted by VersionCommitter (called by save_characterize_and_record_committer) when necessary
+      Hydra::Works::UploadFileToGenericFile.call(generic_file, file, versioning: false)
+      generic_file.label ||= file.original_filename
+      generic_file.title = [generic_file.label] if generic_file.title.blank?
+      save_characterize_and_record_committer do
+        if CurationConcerns.config.respond_to?(:after_create_content)
+          CurationConcerns.config.after_create_content.call(generic_file, user)
+        end
+      end
+    end
+
+    def revert_content(revision_id)
+      generic_file.original_file.restore_version(revision_id)
+      save_characterize_and_record_committer do
+        if CurationConcerns.config.respond_to?(:after_revert_content)
+          CurationConcerns.config.after_revert_content.call(generic_file, user, revision_id)
+        end
+      end
+    end
+
+    def update_content(file)
+      # Tell UploadFileToGenericFile service to skip versioning because versions will be minted by VersionCommitter (called by save_characterize_and_record_committer) when necessary
+      Hydra::Works::UploadFileToGenericFile.call(generic_file, file, versioning: false)
+      save_characterize_and_record_committer do
+        if CurationConcerns.config.respond_to?(:after_update_content)
+          CurationConcerns.config.after_update_content.call(generic_file, user)
+        end
+      end
+    end
+
+    def update_metadata(model_attributes, all_attributes)
+      update_visibility(all_attributes)
+      model_attributes.delete(:visibility)  # Applying this attribute is handled by update_visibility
+      generic_file.attributes = model_attributes
+      generic_file.date_modified = DateTime.now
+      save do
+        if CurationConcerns.config.respond_to?(:after_update_metadata)
+          CurationConcerns.config.after_update_metadata.call(generic_file, user)
+        end
+      end
+    end
+
+    def destroy
+      generic_file.destroy
+      if CurationConcerns.config.respond_to?(:after_destroy)
+        CurationConcerns.config.after_destroy.call(generic_file.id, user)
+      end
+    end
+
+    # Saves the generic file, queues a job to characterize it, and records the committer.
+    # Takes a block which is run if the save was successful.
+    def save_characterize_and_record_committer
+      save do
+        push_characterize_job
+        CurationConcerns::VersioningService.create(generic_file.original_file, user)
+        yield if block_given?
+      end
+    end
+
+    # Takes an optional block and executes the block if the save was successful.
+    # returns false if the save was unsuccessful
+    def save
+      save_tries = 0
+      begin
+        return false unless generic_file.save
+      rescue RSolr::Error::Http => error
+        ActiveFedora::Base.logger.warn "CurationConcerns::GenericFileActor#save Caught RSOLR error #{error.inspect}"
+        save_tries+=1
+        # fail for good if the tries is greater than 3
+        raise error if save_tries >=3
+        sleep 0.01
+        retry
+      end
+      yield if block_given?
+      true
+    end
+
+    def push_characterize_job
+      CurationConcerns.queue.push(CharacterizeJob.new(@generic_file.id))
+    end
+
+    protected
+
+    # This method can be overridden in case there is a custom approach for visibility (e.g. embargo)
+    def update_visibility(attributes)
+      interpret_visibility(attributes)  # relies on CurationConcerns::ManagesEmbargoesActor to interpret and apply visibility
+    end
+
+    private
+
+    # copy visibility from source_concern to destination_concern
+    def copy_visibility(source_concern, destination_concern)
+      destination_concern.visibility =  source_concern.visibility
+    end
+  end
+end

data/app/actors/curation_concerns/work_actor_behavior.rb

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+
+module CurationConcerns::WorkActorBehavior
+  include CurationConcerns::ManagesEmbargoesActor
+
+  def create
+    # set the @files ivar then remove the files attribute so it isn't set by default.
+    files && attributes.delete(:files)
+    # Files must be attached before saving in order to persist their relationship to the work
+    assign_pid && interpret_visibility && attach_files && super && assign_representative && copy_visibility
+  end
+
+  def update
+    add_to_collections(attributes.delete(:collection_ids)) &&
+        interpret_visibility && super && attach_files && copy_visibility
+  end
+
+  delegate :visibility_changed?, to: :curation_concern
+
+  protected
+
+  # Is this here to ensure that the curation_concern has a pid set before any of the other methods are executed?
+  def assign_pid
+    curation_concern.send(:assign_id)
+  end
+
+  def files
+    return @files if defined?(@files)
+    @files = [attributes[:files]].flatten.compact
+  end
+
+  def attach_files
+    files.all? do |file|
+      attach_file(file)
+    end
+  end
+
+  # The default behavior of active_fedora's aggregates association,
+  # when assigning the id accessor (e.g. collection_ids = ['foo:1']) is to add
+  # to new collections, but not remove from old collections.
+  # This method ensures it's removed from the old collections.
+  def add_to_collections(new_collection_ids)
+    return true unless new_collection_ids
+    # remove from old collections
+    # TODO Implement parent_collection_ids https://github.com/projecthydra-labs/hydra-pcdm/issues/157
+    (curation_concern.parent_collections.map(&:id) - new_collection_ids).each do |old_id|
+      Collection.find(old_id).members.delete(curation_concern)
+    end
+
+    #add to new
+    new_collection_ids.each do |coll_id|
+      collection = Collection.find(coll_id)
+      collection.members << curation_concern
+      collection.save
+    end
+    true
+  end
+
+  def assign_representative
+    @generic_files ||= []
+    unless curation_concern.representative
+      curation_concern.representative = @generic_files.first.id unless @generic_files.empty?
+    end
+    curation_concern.save
+  end
+
+  private
+
+  def attach_file(file)
+    generic_file = ::GenericFile.new
+    generic_file_actor = CurationConcerns::GenericFileActor.new(generic_file, user)
+    #TODO we're passing an ID rather than an object. This means the actor does an unnecessary lookup
+    generic_file_actor.create_metadata(curation_concern.id, curation_concern.id)
+    generic_file.visibility = visibility
+    generic_file_actor.create_content(file)
+    @generic_files ||= []
+    @generic_files << generic_file # This is so that other methods like assign_representative can access the generic_files wihtout reloading them from fedora
+    curation_concern.generic_files << generic_file
+  end
+
+  def valid_file?(file_path)
+    return file_path.present? && File.exists?(file_path) && !File.zero?(file_path)
+  end
+
+  # The path of the fedora node where we store the file data
+  def file_path
+    'content'
+  end
+end