crystalcell 0.0.4 → 0.0.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
 - data/CHANGES +6 -1
 - data/VERSION +1 -1
 - data/crystalcell.gemspec +5 -3
 - data/lib/crystalcell/cell.rb +7 -7
 - data/lib/crystalcell/periodiccell.rb +1 -3
 - data/lib/crystalcell/povray.rb +1 -0
 - data/lib/crystalcell/povray/camera.rb +57 -0
 - data/test/povray/test_camera.rb +109 -0
 - metadata +4 -2
 
    
        checksums.yaml
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            ---
         
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            SHA1:
         
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              metadata.gz:  
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              metadata.gz: 2ab1ca9023c434c254a2f47ef1daad5f5692399b
         
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              data.tar.gz: 81e12f4dea37190c62b377d1ffa01a4c79507872
         
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              metadata.gz: 9b69e9a69caaceb60f47e112fd371902436dda5b4af4c06beddb426b6b78b3fe746dcf23191ce11eec062f47977145a6451a0bbe8d4c50967ced6130b648d3a8
         
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              data.tar.gz: f3c9cfd9614fb65050c0c2ae04961e9a39ecaf50352f9ff5384473492dc8f9664190b534efa4c1e440a49c2ee89b329cb7447fb5bad0177144905866a30a83d3
         
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        data/CHANGES
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            = crystalcell Changelog
         
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            == Master (for 0.0. 
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            == Master (for 0.0.6)
         
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            == Version 0.0.5 [2016-05-09] released
         
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            * Add CrystalCell::Povray::Camera
         
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            * Delete meaningless codes
         
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            == Version 0.0.4 [2016-03-11] released
         
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            * LatticeAxes.axes is added.
         
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        data/VERSION
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            0.0. 
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            0.0.5
         
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        data/crystalcell.gemspec
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            # DO NOT EDIT THIS FILE DIRECTLY
         
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            # Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
         
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            # -*- encoding: utf-8 -*-
         
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            # stub: crystalcell 0.0. 
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            # stub: crystalcell 0.0.5 ruby lib
         
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            Gem::Specification.new do |s|
         
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              s.name = "crystalcell"
         
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              s.version = "0.0. 
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              s.version = "0.0.5"
         
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              s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
         
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              s.require_paths = ["lib"]
         
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              s.authors = ["ippei94da"]
         
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              s.date = "2016- 
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              s.date = "2016-05-09"
         
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              s.description = "This gem provides Cell, LatticeAxes, Atom classes, and so on.\n    And this provides simple treatment of a periodic boundary condition.\n  "
         
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              s.email = "ippei94da@gmail.com"
         
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              s.extra_rdoc_files = [
         
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                "lib/crystalcell/latticeaxes.rb",
         
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                "lib/crystalcell/periodiccell.rb",
         
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                "lib/crystalcell/povray.rb",
         
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                "lib/crystalcell/povray/camera.rb",
         
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                "lib/crystalcell/povray/cell.rb",
         
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                "lib/crystalcell/povray/cylinder.rb",
         
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                "lib/crystalcell/povray/element.rb",
         
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                "lib/crystalcell/povray/triangle.rb",
         
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                "test/cif/ZrO2-25C.cif",
         
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                "test/helper.rb",
         
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                "test/povray/test_camera.rb",
         
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                "test/povray/test_cell.rb",
         
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                "test/povray/test_element.rb",
         
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                "test/test_atom.rb",
         
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        data/lib/crystalcell/cell.rb
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         @@ -336,7 +336,7 @@ class CrystalCell::Cell 
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                end
         
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                @axes = CrystalCell::LatticeAxes.new( axes )
         
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                atoms = []
         
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                #atoms = []
         
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                @atoms.each do |atom|
         
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                  position = []
         
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                  3.times do |i|
         
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         @@ -476,12 +476,12 @@ class CrystalCell::Cell 
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                #pp axes_t, poss, types, symprec, angle_tolerance
         
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                spgnum, spg, hallnum, hall_symbol, t_mat, o_shift,
         
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                rotations, translations, wyckoffs =
         
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                #spgnum, spg, hallnum, hall_symbol, t_mat, o_shift,
         
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                #rotations, translations, wyckoffs =
         
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                #  get_dataset(axes_t, poss, types, symprec, angle_tolerance)
         
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                dataset = get_dataset(axes_t, poss, types, symprec, angle_tolerance)
         
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                rotations = dataset[6]
         
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                translations = dataset[7]
         
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                results = []
         
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                rotations.size.times do |index|
         
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                return tmp
         
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              end
         
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              #undef center_of_atoms
         
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              # superclass の inverse_axis! を行ったあと、
         
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              # 原子の座標をセル内部に移す。
         
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              def inverse_axis!( axis_id )
         
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                result = Marshal.load( Marshal.dump( self ) )
         
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                #result = Marshal.load( Marshal.dump( self ) )
         
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                super( axis_id )
         
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                reset_positions_inside
         
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              end
         
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        data/lib/crystalcell/povray.rb
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            #! /usr/bin/env ruby
         
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            # coding: utf-8
         
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            #
         
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            #
         
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            #
         
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            class CrystalCell::Povray::Camera
         
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              #
         
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                #camera { orthographic
         
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                #  // orthographic       // これを入れる場合は location の前に。
         
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                #  location <  3.0, 3.0, 3.0 > // camera location
         
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                #  look_at  <  0.0, 0.0, 0.0 > // 注視点
         
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                #  sky      <  0.0, 0.0, 1.0 >
         
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                #  right    <-1.00, 0.0, 0.0 >
         
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                #  up       <  0.0, 1.0, 0.0 >
         
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                #  angle    68                 // カメラの水平方向の画角。左右合計の角度。
         
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                #}
         
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                #@orthographic = true
         
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                #@location = [   3.0, 3.0, 3.0 ]
         
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                #@look_at  = [   0.0, 0.0, 0.0 ]
         
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                #@sky      = [   0.0, 0.0, 1.0 ]
         
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                #@right    = [ -1.00, 0.0, 0.0 ]
         
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                #@up       = [   0.0, 1.0, 0.0 ]
         
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                #@angle    = 68
         
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              attr_accessor :orthographic, :location, :look_at, :sky, :right, :up, :angle
         
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              def initialize(orthographic:, location:, look_at:, sky:, right:, up:, angle:,
         
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                             additions: [])
         
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                @orthographic = orthographic
         
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                @location     = location    
         
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                @look_at      = look_at     
         
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                @sky          = sky         
         
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                @right        = right       
         
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                @up           = up          
         
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                @angle        = angle       
         
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                @additions    = additions       
         
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              end
         
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              def dump(io)
         
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                io.puts "camera {"
         
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                io.puts "  orthographic" if @orthographic
         
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                io.printf("  location <%f, %f, %f >\n", *@location)
         
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                io.printf("  look_at  <%f, %f, %f >\n", *@look_at)
         
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                io.printf("  sky      <%f, %f, %f >\n", *@sky)
         
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                io.printf("  right    <%f, %f, %f >\n", *@right)
         
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                io.printf("  up       <%f, %f, %f >\n", *@up)
         
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                io.printf("  angle    %f\n"           , @angle)
         
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                io.puts "}"
         
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                @additions.each do |i|
         
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                  io.puts i
         
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                end
         
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              end
         
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            end
         
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            #! /usr/bin/env ruby
         
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            # coding: utf-8
         
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            require "pp"
         
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            require "helper"
         
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            #require "test/unit"
         
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            #require "pkg/klass.rb"
         
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            class TC_Camera < Test::Unit::TestCase
         
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              def setup
         
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                @c00 = CrystalCell::Povray::Camera.new(
         
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                  orthographic: true,
         
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                  location:     [   3.0, 3.0, 3.0 ],
         
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                  look_at:      [   0.0, 0.0, 0.0 ],
         
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                  sky:          [   0.0, 0.0, 1.0 ],
         
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                  right:        [ -1.00, 0.0, 0.0 ],
         
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                  up:           [   0.0, 1.0, 0.0 ],
         
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                  angle:        68
         
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                )
         
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              end
         
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              def test_initialize
         
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                hash = {
         
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                  orthographic: true,
         
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                  location:     [   3.0, 3.0, 3.0 ],
         
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                  look_at:      [   0.0, 0.0, 0.0 ],
         
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                  sky:          [   0.0, 0.0, 1.0 ],
         
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                  right:        [ -1.00, 0.0, 0.0 ],
         
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                  up:           [   0.0, 1.0, 0.0 ],
         
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                  angle:        68
         
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                }
         
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                @c01 = CrystalCell::Povray::Camera.new(hash)
         
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                assert_equal( true               , @c01.orthographic)
         
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                assert_equal( [   3.0, 3.0, 3.0 ], @c01.location    )
         
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                assert_equal( [   0.0, 0.0, 0.0 ], @c01.look_at     )
         
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                assert_equal( [   0.0, 0.0, 1.0 ], @c01.sky         )
         
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                assert_equal( [ -1.00, 0.0, 0.0 ], @c01.right       )
         
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                assert_equal( [   0.0, 1.0, 0.0 ], @c01.up          )
         
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                assert_equal( 68                 , @c01.angle       )
         
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              end
         
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| 
      
 41 
     | 
    
         
            +
             
     | 
| 
      
 42 
     | 
    
         
            +
              def test_accessor
         
     | 
| 
      
 43 
     | 
    
         
            +
                assert_equal( true               , @c00.orthographic)
         
     | 
| 
      
 44 
     | 
    
         
            +
                assert_equal( [   3.0, 3.0, 3.0 ], @c00.location    )
         
     | 
| 
      
 45 
     | 
    
         
            +
                assert_equal( [   0.0, 0.0, 0.0 ], @c00.look_at     )
         
     | 
| 
      
 46 
     | 
    
         
            +
                assert_equal( [   0.0, 0.0, 1.0 ], @c00.sky         )
         
     | 
| 
      
 47 
     | 
    
         
            +
                assert_equal( [ -1.00, 0.0, 0.0 ], @c00.right       )
         
     | 
| 
      
 48 
     | 
    
         
            +
                assert_equal( [   0.0, 1.0, 0.0 ], @c00.up          )
         
     | 
| 
      
 49 
     | 
    
         
            +
                assert_equal( 68                 , @c00.angle       )
         
     | 
| 
      
 50 
     | 
    
         
            +
             
     | 
| 
      
 51 
     | 
    
         
            +
                @c00.orthographic = false
         
     | 
| 
      
 52 
     | 
    
         
            +
                assert_equal( false              , @c00.orthographic)
         
     | 
| 
      
 53 
     | 
    
         
            +
              end
         
     | 
| 
      
 54 
     | 
    
         
            +
             
     | 
| 
      
 55 
     | 
    
         
            +
              def test_additional
         
     | 
| 
      
 56 
     | 
    
         
            +
                c10 = CrystalCell::Povray::Camera.new(
         
     | 
| 
      
 57 
     | 
    
         
            +
                  orthographic: true,
         
     | 
| 
      
 58 
     | 
    
         
            +
                  location:     [   3.0, 3.0, 3.0 ],
         
     | 
| 
      
 59 
     | 
    
         
            +
                  look_at:      [   0.0, 0.0, 0.0 ],
         
     | 
| 
      
 60 
     | 
    
         
            +
                  sky:          [   0.0, 0.0, 1.0 ],
         
     | 
| 
      
 61 
     | 
    
         
            +
                  right:        [ -1.00, 0.0, 0.0 ],
         
     | 
| 
      
 62 
     | 
    
         
            +
                  up:           [   0.0, 1.0, 0.0 ],
         
     | 
| 
      
 63 
     | 
    
         
            +
                  angle:        68,
         
     | 
| 
      
 64 
     | 
    
         
            +
                  additions:[ "background {color rgb<1,1,1>}",
         
     | 
| 
      
 65 
     | 
    
         
            +
                              "light_source{ < 4, 1, 4 > color <1,1,1> parallel point_at 0 }",
         
     | 
| 
      
 66 
     | 
    
         
            +
                              "default{ texture{ finish{ ambient 0.4 phong 1.0 phong_size 10 } } }",
         
     | 
| 
      
 67 
     | 
    
         
            +
                            ]
         
     | 
| 
      
 68 
     | 
    
         
            +
                )
         
     | 
| 
      
 69 
     | 
    
         
            +
                correct = <<HERE
         
     | 
| 
      
 70 
     | 
    
         
            +
            camera {
         
     | 
| 
      
 71 
     | 
    
         
            +
              orthographic
         
     | 
| 
      
 72 
     | 
    
         
            +
              location <3.000000, 3.000000, 3.000000 >
         
     | 
| 
      
 73 
     | 
    
         
            +
              look_at  <0.000000, 0.000000, 0.000000 >
         
     | 
| 
      
 74 
     | 
    
         
            +
              sky      <0.000000, 0.000000, 1.000000 >
         
     | 
| 
      
 75 
     | 
    
         
            +
              right    <-1.000000, 0.000000, 0.000000 >
         
     | 
| 
      
 76 
     | 
    
         
            +
              up       <0.000000, 1.000000, 0.000000 >
         
     | 
| 
      
 77 
     | 
    
         
            +
              angle    68.000000
         
     | 
| 
      
 78 
     | 
    
         
            +
            }
         
     | 
| 
      
 79 
     | 
    
         
            +
            background {color rgb<1,1,1>}
         
     | 
| 
      
 80 
     | 
    
         
            +
            light_source{ < 4, 1, 4 > color <1,1,1> parallel point_at 0 }
         
     | 
| 
      
 81 
     | 
    
         
            +
            default{ texture{ finish{ ambient 0.4 phong 1.0 phong_size 10 } } }
         
     | 
| 
      
 82 
     | 
    
         
            +
            HERE
         
     | 
| 
      
 83 
     | 
    
         
            +
                io = StringIO.new
         
     | 
| 
      
 84 
     | 
    
         
            +
                c10.dump(io)
         
     | 
| 
      
 85 
     | 
    
         
            +
                io.rewind
         
     | 
| 
      
 86 
     | 
    
         
            +
                result = io.read
         
     | 
| 
      
 87 
     | 
    
         
            +
                assert_equal(correct, result)
         
     | 
| 
      
 88 
     | 
    
         
            +
              end
         
     | 
| 
      
 89 
     | 
    
         
            +
             
     | 
| 
      
 90 
     | 
    
         
            +
              def test_dump
         
     | 
| 
      
 91 
     | 
    
         
            +
                correct = <<HERE
         
     | 
| 
      
 92 
     | 
    
         
            +
            camera {
         
     | 
| 
      
 93 
     | 
    
         
            +
              orthographic
         
     | 
| 
      
 94 
     | 
    
         
            +
              location <3.000000, 3.000000, 3.000000 >
         
     | 
| 
      
 95 
     | 
    
         
            +
              look_at  <0.000000, 0.000000, 0.000000 >
         
     | 
| 
      
 96 
     | 
    
         
            +
              sky      <0.000000, 0.000000, 1.000000 >
         
     | 
| 
      
 97 
     | 
    
         
            +
              right    <-1.000000, 0.000000, 0.000000 >
         
     | 
| 
      
 98 
     | 
    
         
            +
              up       <0.000000, 1.000000, 0.000000 >
         
     | 
| 
      
 99 
     | 
    
         
            +
              angle    68.000000
         
     | 
| 
      
 100 
     | 
    
         
            +
            }
         
     | 
| 
      
 101 
     | 
    
         
            +
            HERE
         
     | 
| 
      
 102 
     | 
    
         
            +
                io = StringIO.new
         
     | 
| 
      
 103 
     | 
    
         
            +
                @c00.dump(io)
         
     | 
| 
      
 104 
     | 
    
         
            +
                io.rewind
         
     | 
| 
      
 105 
     | 
    
         
            +
                result = io.read
         
     | 
| 
      
 106 
     | 
    
         
            +
                assert_equal(correct, result)
         
     | 
| 
      
 107 
     | 
    
         
            +
              end
         
     | 
| 
      
 108 
     | 
    
         
            +
             
     | 
| 
      
 109 
     | 
    
         
            +
            end
         
     | 
    
        metadata
    CHANGED
    
    | 
         @@ -1,14 +1,14 @@ 
     | 
|
| 
       1 
1 
     | 
    
         
             
            --- !ruby/object:Gem::Specification
         
     | 
| 
       2 
2 
     | 
    
         
             
            name: crystalcell
         
     | 
| 
       3 
3 
     | 
    
         
             
            version: !ruby/object:Gem::Version
         
     | 
| 
       4 
     | 
    
         
            -
              version: 0.0. 
     | 
| 
      
 4 
     | 
    
         
            +
              version: 0.0.5
         
     | 
| 
       5 
5 
     | 
    
         
             
            platform: ruby
         
     | 
| 
       6 
6 
     | 
    
         
             
            authors:
         
     | 
| 
       7 
7 
     | 
    
         
             
            - ippei94da
         
     | 
| 
       8 
8 
     | 
    
         
             
            autorequire: 
         
     | 
| 
       9 
9 
     | 
    
         
             
            bindir: bin
         
     | 
| 
       10 
10 
     | 
    
         
             
            cert_chain: []
         
     | 
| 
       11 
     | 
    
         
            -
            date: 2016- 
     | 
| 
      
 11 
     | 
    
         
            +
            date: 2016-05-09 00:00:00.000000000 Z
         
     | 
| 
       12 
12 
     | 
    
         
             
            dependencies:
         
     | 
| 
       13 
13 
     | 
    
         
             
            - !ruby/object:Gem::Dependency
         
     | 
| 
       14 
14 
     | 
    
         
             
              name: test-unit
         
     | 
| 
         @@ -160,6 +160,7 @@ files: 
     | 
|
| 
       160 
160 
     | 
    
         
             
            - lib/crystalcell/latticeaxes.rb
         
     | 
| 
       161 
161 
     | 
    
         
             
            - lib/crystalcell/periodiccell.rb
         
     | 
| 
       162 
162 
     | 
    
         
             
            - lib/crystalcell/povray.rb
         
     | 
| 
      
 163 
     | 
    
         
            +
            - lib/crystalcell/povray/camera.rb
         
     | 
| 
       163 
164 
     | 
    
         
             
            - lib/crystalcell/povray/cell.rb
         
     | 
| 
       164 
165 
     | 
    
         
             
            - lib/crystalcell/povray/cylinder.rb
         
     | 
| 
       165 
166 
     | 
    
         
             
            - lib/crystalcell/povray/element.rb
         
     | 
| 
         @@ -167,6 +168,7 @@ files: 
     | 
|
| 
       167 
168 
     | 
    
         
             
            - lib/crystalcell/povray/triangle.rb
         
     | 
| 
       168 
169 
     | 
    
         
             
            - test/cif/ZrO2-25C.cif
         
     | 
| 
       169 
170 
     | 
    
         
             
            - test/helper.rb
         
     | 
| 
      
 171 
     | 
    
         
            +
            - test/povray/test_camera.rb
         
     | 
| 
       170 
172 
     | 
    
         
             
            - test/povray/test_cell.rb
         
     | 
| 
       171 
173 
     | 
    
         
             
            - test/povray/test_element.rb
         
     | 
| 
       172 
174 
     | 
    
         
             
            - test/test_atom.rb
         
     |