crucible_ci 0.1.0

checksums.yaml

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+SHA1:
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+  data.tar.gz: fdad753ff654c84d5498fb34a923a4ef1f2dbcce
+SHA512:
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data/.gitignore

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+.DS_Store
+results.html
+pkg
+html
+logs/*.log

data/Gemfile

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+source 'https://rubygems.org'
+
+# Specify your gem's dependencies in crucible_ci.gemspec
+gemspec
+
+gem 'plan_executor', git: 'https://github.com/fhir-crucible/plan_executor.git', :branch => 'master'
+# gem 'plan_executor', path: '../plan_executor'
+gem 'fhir_models', git: 'https://github.com/fhir-crucible/fhir_models.git', branch: 'master'
+gem 'fhir_client', git: 'https://github.com/fhir-crucible/fhir_client.git', branch: 'master'
+
+group :test do
+  gem 'pry'
+  gem 'pry-nav'
+end

data/Gemfile.lock

@@ -0,0 +1,169 @@
+GIT
+  remote: https://github.com/fhir-crucible/fhir_client.git
+  revision: cf09b77d0264930e99e59b04b739f1eb05521f24
+  branch: master
+  specs:
+    fhir_client (1.8.0)
+      activesupport (>= 3)
+      addressable (>= 2.3)
+      fhir_models (>= 1.8.0)
+      nokogiri
+      oauth2 (~> 1.1)
+      rack (>= 1.5)
+      rest-client (~> 1.8)
+      tilt (>= 1.1)
+
+GIT
+  remote: https://github.com/fhir-crucible/fhir_models.git
+  revision: 07d952e5a3bfe22c13dd7498ddb256e57ee5776c
+  branch: master
+  specs:
+    fhir_models (1.8.2)
+      bcp47 (>= 0.3)
+      date_time_precision (>= 0.8)
+      mime-types (>= 1.16, < 3)
+      nokogiri (>= 1.6)
+
+GIT
+  remote: https://github.com/fhir-crucible/plan_executor.git
+  revision: fc9d014a0c961398185bfa6347734c381c617634
+  branch: master
+  specs:
+    plan_executor (1.8.0)
+      ansi
+      fhir_client
+      fhir_models
+      jsonpath
+      method_source
+      nokogiri
+      nokogiri-diff
+
+PATH
+  remote: .
+  specs:
+    crucible_ci (0.1.0)
+      methadone (~> 1.9.2)
+
+GEM
+  remote: https://rubygems.org/
+  specs:
+    activesupport (5.0.1)
+      concurrent-ruby (~> 1.0, >= 1.0.2)
+      i18n (~> 0.7)
+      minitest (~> 5.1)
+      tzinfo (~> 1.1)
+    addressable (2.5.0)
+      public_suffix (~> 2.0, >= 2.0.2)
+    ansi (1.5.0)
+    aruba (0.14.2)
+      childprocess (~> 0.5.6)
+      contracts (~> 0.9)
+      cucumber (>= 1.3.19)
+      ffi (~> 1.9.10)
+      rspec-expectations (>= 2.99)
+      thor (~> 0.19)
+    bcp47 (0.3.3)
+      i18n
+    builder (3.2.3)
+    childprocess (0.5.9)
+      ffi (~> 1.0, >= 1.0.11)
+    coderay (1.1.1)
+    concurrent-ruby (1.0.4)
+    contracts (0.14.0)
+    cucumber (2.4.0)
+      builder (>= 2.1.2)
+      cucumber-core (~> 1.5.0)
+      cucumber-wire (~> 0.0.1)
+      diff-lcs (>= 1.1.3)
+      gherkin (~> 4.0)
+      multi_json (>= 1.7.5, < 2.0)
+      multi_test (>= 0.1.2)
+    cucumber-core (1.5.0)
+      gherkin (~> 4.0)
+    cucumber-wire (0.0.1)
+    date_time_precision (0.8.1)
+    diff-lcs (1.3)
+    domain_name (0.5.20161129)
+      unf (>= 0.0.5, < 1.0.0)
+    faraday (0.10.1)
+      multipart-post (>= 1.2, < 3)
+    ffi (1.9.17)
+    gherkin (4.0.0)
+    http-cookie (1.0.3)
+      domain_name (~> 0.5)
+    i18n (0.8.0)
+    jsonpath (0.5.8)
+      multi_json
+    jwt (1.5.6)
+    methadone (1.9.5)
+      bundler
+    method_source (0.8.2)
+    mime-types (2.99.3)
+    mini_portile2 (2.1.0)
+    minitest (5.10.1)
+    multi_json (1.12.1)
+    multi_test (0.1.2)
+    multi_xml (0.6.0)
+    multipart-post (2.0.0)
+    netrc (0.11.0)
+    nokogiri (1.7.0.1)
+      mini_portile2 (~> 2.1.0)
+    nokogiri-diff (0.2.0)
+      nokogiri (~> 1.5)
+      tdiff (~> 0.3, >= 0.3.2)
+    oauth2 (1.3.0)
+      faraday (>= 0.8, < 0.11)
+      jwt (~> 1.0)
+      multi_json (~> 1.3)
+      multi_xml (~> 0.5)
+      rack (>= 1.2, < 3)
+    power_assert (1.0.1)
+    pry (0.10.4)
+      coderay (~> 1.1.0)
+      method_source (~> 0.8.1)
+      slop (~> 3.4)
+    pry-nav (0.2.4)
+      pry (>= 0.9.10, < 0.11.0)
+    public_suffix (2.0.5)
+    rack (2.0.1)
+    rake (12.0.0)
+    rdoc (5.0.0)
+    rest-client (1.8.0)
+      http-cookie (>= 1.0.2, < 2.0)
+      mime-types (>= 1.16, < 3.0)
+      netrc (~> 0.7)
+    rspec-expectations (3.5.0)
+      diff-lcs (>= 1.2.0, < 2.0)
+      rspec-support (~> 3.5.0)
+    rspec-support (3.5.0)
+    slop (3.6.0)
+    tdiff (0.3.3)
+    test-unit (3.2.3)
+      power_assert
+    thor (0.19.4)
+    thread_safe (0.3.5)
+    tilt (2.0.6)
+    tzinfo (1.2.2)
+      thread_safe (~> 0.1)
+    unf (0.1.4)
+      unf_ext
+    unf_ext (0.0.7.2)
+
+PLATFORMS
+  ruby
+
+DEPENDENCIES
+  aruba
+  bundler (~> 1.12)
+  crucible_ci!
+  fhir_client!
+  fhir_models!
+  plan_executor!
+  pry
+  pry-nav
+  rake
+  rdoc
+  test-unit
+
+BUNDLED WITH
+   1.14.4

data/LICENSE

@@ -0,0 +1,201 @@
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data/README.md

@@ -0,0 +1,48 @@
+# CrucibleCI
+
+CrucibleCI is a gem to run Crucible's [Plan Executor](https://github.com/fhir-crucible/plan_executor) tests against a FHIR server. It's intended for use in Continuous Integration and other testing systems to validate servers during development.
+
+## Installation
+
+Add this line to your application's Gemfile
+
+```ruby
+gem 'crucible_ci'
+```
+
+And then execute:
+
+    $ bundle
+
+Or install it yourself as:
+
+    $ gem install crucible_ci
+
+## Usage
+
+```shell
+./bin/crucible_ci [options] server_url
+
+```
+Where `server_url` is the URL of a FHIR server accessible to the current computer.
+
+### Options
+
+* `-h`, `--help` - Displays this help message
+* `-r`, `--resource` `VALUE` - The name of a FHIR Resource to be tested (such as `Patient` or `Encounter`)
+* `-t`, `--test` `VALUE` - The name of a Plan Executor test to be tested (such as `HistoryTest`)
+* `-a`, `--allowed-failures` `VALUE` - The number of failures allowed in the test suite (default: `0`)
+* `-v`, `--version` - Show help/version info
+* `--log-level` `LEVEL` Set the logging level (`debug`|`info`|`warn`|`error`|`fatal`) (default: `info`)
+
+## Development
+
+After checking out the repo, run `bin/setup` to install dependencies. You can also run `bin/console` for an interactive prompt that will allow you to experiment.
+
+To install this gem onto your local machine, run `bundle exec rake install`. To release a new version, update the version number in `version.rb`, and then run `bundle exec rake release`, which will create a git tag for the version, push git commits and tags, and push the `.gem` file to [rubygems.org](https://rubygems.org).
+
+## Contributing
+
+Bug reports and pull requests are welcome on GitHub at https://github.com/fhir-crucible/crucible_ci.
+
+Copyright (C) 2017 The MITRE Corporation.

data/Rakefile

@@ -0,0 +1,56 @@
+def dump_load_path
+  puts $LOAD_PATH.join("\n")
+  found = nil
+  $LOAD_PATH.each do |path|
+    next unless File.exist?(File.join(path, 'rspec'))
+    puts "Found rspec in #{path}"
+    if File.exist?(File.join(path, 'rspec', 'core'))
+      puts 'Found core'
+      if File.exist?(File.join(path, 'rspec', 'core', 'rake_task'))
+        puts 'Found rake_task'
+        found = path
+      else
+        puts '!! no rake_task'
+      end
+    else
+      puts '!!! no core'
+    end
+  end
+  if found.nil?
+    puts "Didn't find rspec/core/rake_task anywhere"
+  else
+    puts "Found in #{path}"
+  end
+end
+require 'bundler'
+require 'rake/clean'
+
+require 'rake/testtask'
+
+require 'cucumber'
+require 'cucumber/rake/task'
+gem 'rdoc' # we need the installed RDoc gem, not the system one
+require 'rdoc/task'
+
+include Rake::DSL
+
+Bundler::GemHelper.install_tasks
+
+Rake::TestTask.new do |t|
+  t.pattern = 'test/tc_*.rb'
+end
+
+CUKE_RESULTS = 'results.html'.freeze
+CLEAN << CUKE_RESULTS
+Cucumber::Rake::Task.new(:features) do |t|
+  t.cucumber_opts = "features --format html -o #{CUKE_RESULTS} --format pretty --no-source -x"
+  t.fork = false
+end
+
+Rake::RDocTask.new do |rd|
+  rd.main = 'README.rdoc'
+
+  rd.rdoc_files.include('README.rdoc', 'lib/**/*.rb', 'bin/**/*')
+end
+
+task default: [:test, :features]

data/bin/console

@@ -0,0 +1,11 @@
+#!/usr/bin/env ruby
+
+require 'bundler/setup'
+require 'crucible_ci'
+
+# You can add fixtures and/or initialization code here to make experimenting
+# with your gem easier. You can also use a different console, if you like.
+
+# (If you use this, don't forget to add pry to your Gemfile!)
+require 'pry'
+Pry.start

data/bin/crucible_ci

@@ -0,0 +1,32 @@
+#!/usr/bin/env ruby
+
+require 'optparse'
+require 'methadone'
+require 'bundler/setup'
+require 'crucible_ci'
+
+class App
+  include Methadone::Main
+  include Methadone::CLILogging
+
+  main do |server_url|
+    allowed_failures = options['allowed-failures'] ? options['allowed-failures'].to_i : 0
+    if options[:resource] || options[:test]
+      CrucibleCi::Executor.execute(server_url, allowed_failures, options[:test], options[:resource])
+    else
+      CrucibleCi::Executor.execute_all(server_url, allowed_failures)
+    end
+  end
+
+  on('-r', '--resource VALUE', 'The name of a FHIR Resource to be tested')
+  on('-t', '--test VALUE', 'The name of a Plan Executor test to be tested')
+  on('-a', '--allowed-failures VALUE', 'The number of failures allowed in the test suite (Default: 0)')
+
+  arg :server_url
+
+  version CrucibleCi::VERSION
+
+  use_log_level_option toggle_debug_on_signal: 'USR1'
+
+  go!
+end

data/bin/setup

@@ -0,0 +1,8 @@
+#!/usr/bin/env bash
+set -euo pipefail
+IFS=$'\n\t'
+set -vx
+
+bundle install
+
+# Do any other automated setup that you need to do here

data/crucible_ci.gemspec

@@ -0,0 +1,27 @@
+# coding: utf-8
+lib = File.expand_path('../lib', __FILE__)
+$LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
+require 'crucible_ci/version'
+
+Gem::Specification.new do |spec|
+  spec.name = 'crucible_ci'
+  spec.license = 'Apache-2.0'
+  spec.version       = CrucibleCi::VERSION
+  spec.authors       = ["Michael O'Keefe"]
+  spec.email         = ['mokeefe@mitre.org']
+
+  spec.summary       = 'A way to run Plan Executor tests in the command line'
+  spec.homepage      = 'https://github.com/fhir-crucible/crucible_ci'
+
+  spec.files         = `git ls-files -z`.split("\x0").reject { |f| f.match(%r{^(test|spec|features)/}) }
+  spec.bindir        = 'exe'
+  spec.executables   = spec.files.grep(%r{^exe/}) { |f| File.basename(f) }
+  spec.require_paths = ['lib']
+
+  spec.add_development_dependency 'bundler', '~> 1.12'
+  spec.add_development_dependency('rdoc')
+  spec.add_development_dependency('aruba')
+  spec.add_development_dependency('rake')
+  spec.add_dependency('methadone', '~> 1.9.2')
+  spec.add_development_dependency('test-unit')
+end

data/lib/crucible_ci/version.rb

@@ -0,0 +1,3 @@
+module CrucibleCi
+  VERSION = '0.1.0'.freeze
+end

data/lib/crucible_ci.rb

@@ -0,0 +1,143 @@
+require 'crucible_ci/version'
+require 'plan_executor'
+require 'benchmark'
+
+module CrucibleCi
+  class Executor
+    def self.execute(url, allowed_failures, test = nil, resource = nil)
+      results = nil
+      FHIR.logger = Logger.new("logs/crucible_ci.log", 10, 1024000)
+      b = Benchmark.measure do
+        client = FHIR::Client.new(url)
+        client.conformance_statement
+        # options = client.get_oauth2_metadata_from_conformance
+        # set_client_secrets(client, options) unless options.empty?
+        results = execute_test(client, test, resource)
+      end
+      puts "Execute #{test} completed in #{b.real} seconds."
+      passing?(results, allowed_failures)
+    end
+
+    def self.execute_all(url, allowed_failures)
+      results = nil
+      FHIR.logger = Logger.new("logs/crucible_ci.log", 10, 1024000)
+      b = Benchmark.measure do
+        client = FHIR::Client.new(url)
+        client.conformance_statement
+        # options = client.get_oauth2_metadata_from_conformance
+        # set_client_secrets(client, options) unless options.empty?
+        results = execute_all(client)
+      end
+      puts "Execute All completed in #{b.real} seconds."
+      passing?(results, allowed_failures)
+    end
+
+    def self.num_failures(results)
+      statuses = results.collect { |_, v| v.collect { |r| r['status'] } }.flatten
+      return statuses.count('fail') + statuses.count('error')
+    end
+
+    def self.passing?(results, allowed_failures)
+      failures = num_failures(results)
+      if failures > allowed_failures
+        return 64
+      else
+        return 0
+      end
+    end
+
+    def self.set_client_secrets(client, options)
+      puts "Using OAuth2 Options: #{options}"
+      print 'Enter client id: '
+      client_id = STDIN.gets.chomp
+      print 'Enter client secret: '
+      client_secret = STDIN.gets.chomp
+      if client_id != '' && client_secret != ''
+        options[:client_id] = client_id
+        options[:client_secret] = client_secret
+        client.set_oauth2_auth(options[:client_id], options[:client_secret], options[:authorize_url], options[:token_url])
+      else
+        puts 'Ignoring OAuth2 credentials: empty id or secret. Using unsecured client...'
+      end
+    end
+
+    def self.execute_test(client, key, resourceType = nil)
+      executor = Crucible::Tests::Executor.new(client)
+      test = executor.find_test(key)
+      if test.nil?
+        puts "Unable to find test: #{key}"
+        return -1
+      end
+      results = nil
+      if !resourceType.nil? && test.respond_to?(:resource_class=) && FHIR::RESOURCES.include?(resourceType)
+        results = test.execute("FHIR::#{resourceType}".constantize)
+      end
+      results = executor.execute(test) if results.nil?
+      output_results results
+    end
+
+    def self.execute_all(client)
+      executor = Crucible::Tests::Executor.new(client)
+      all_results = {}
+      executor.tests.each do |test|
+        next if test.multiserver
+        results = executor.execute(test)
+        all_results.merge! results
+        output_results results
+      end
+      all_results
+    end
+
+    def self.execute_multiserver_test(client, client2, key)
+      executor = Crucible::Tests::Executor.new(client, client2)
+      output_results executor.execute(executor.find_test(key))
+    end
+
+    def self.collect_metadata(client, test)
+      output_results Crucible::Tests::Executor.new(client).metadata(test), true
+    end
+
+    def self.write_result(status, test_name, message)
+      tab_size = 10
+      "#{' ' * (tab_size - status.length)}#{colorize(status)} #{test_name}: #{message}"
+    end
+
+    def self.colorize(status)
+      case status.upcase
+      when 'PASS'
+        ANSI.green { status.upcase }
+      when 'SKIP'
+        ANSI.blue { status.upcase }
+      when 'FAIL'
+        ANSI.red { status.upcase }
+      else
+        ANSI.white_on_red { status.upcase }
+      end
+    end
+
+    def self.output_results(results, metadata_only = false)
+      require 'ansi'
+      results.keys.each do |suite_key|
+        puts suite_key
+        results[suite_key].each do |test|
+          puts write_result(test['status'], test[:test_method], test['message'])
+          if test['status'].casecmp('ERROR').zero?
+            puts ' ' * 12 + '-' * 40
+            puts ' ' * 12 + test['data'].gsub("\n", "\n" + ' ' * 12).to_s
+            puts ' ' * 12 + '-' * 40
+          end
+          next unless metadata_only == true
+          # warnings
+          puts (test['warnings'].map { |w| "#{(' ' * 10)}WARNING: #{w}" }).join("\n") if test['warnings']
+          # metadata
+          puts (test['links'].map { |w| "#{(' ' * 10)}Link: #{w}" }).join("\n") if test['links']
+          puts (test['requires'].map { |w| "#{(' ' * 10)}Requires: #{w[:resource]}: #{w[:methods]}" }).join("\n") if test['requires']
+          puts (test['validates'].map { |w| "#{(' ' * 10)}Validates: #{w[:resource]}: #{w[:methods]}" }).join("\n") if test['validates']
+          # data
+          puts (' ' * 10) + test['data'] if test['data']
+        end
+      end
+      results
+    end
+  end
+end

metadata

@@ -0,0 +1,141 @@
+--- !ruby/object:Gem::Specification
+name: crucible_ci
+version: !ruby/object:Gem::Version
+  version: 0.1.0
+platform: ruby
+authors:
+- Michael O'Keefe
+autorequire: 
+bindir: exe
+cert_chain: []
+date: 2017-02-15 00:00:00.000000000 Z
+dependencies:
+- !ruby/object:Gem::Dependency
+  name: bundler
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.12'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.12'
+- !ruby/object:Gem::Dependency
+  name: rdoc
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: aruba
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: rake
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: methadone
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: 1.9.2
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: 1.9.2
+- !ruby/object:Gem::Dependency
+  name: test-unit
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+description: 
+email:
+- mokeefe@mitre.org
+executables: []
+extensions: []
+extra_rdoc_files: []
+files:
+- ".gitignore"
+- Gemfile
+- Gemfile.lock
+- LICENSE
+- README.md
+- Rakefile
+- bin/console
+- bin/crucible_ci
+- bin/setup
+- crucible_ci.gemspec
+- lib/crucible_ci.rb
+- lib/crucible_ci/version.rb
+- logs/.gitkeep
+homepage: https://github.com/fhir-crucible/crucible_ci
+licenses:
+- Apache-2.0
+metadata: {}
+post_install_message: 
+rdoc_options: []
+require_paths:
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - ">="
+    - !ruby/object:Gem::Version
+      version: '0'
+required_rubygems_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - ">="
+    - !ruby/object:Gem::Version
+      version: '0'
+requirements: []
+rubyforge_project: 
+rubygems_version: 2.4.8
+signing_key: 
+specification_version: 4
+summary: A way to run Plan Executor tests in the command line
+test_files: []