cqm-reports 4.0.1 → 4.1.0
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- checksums.yaml +4 -4
- data/Gemfile +0 -2
- data/lib/html-export/qdm-patient/data_element/_data_element_other_fields.mustache +1 -1
- data/lib/html-export/qdm-patient/qdm_patient.rb +22 -5
- data/lib/qrda-export/catI-r5/qrda1_r5.rb +12 -0
- data/lib/qrda-export/catI-r5/qrda_header/_participant.mustache +3 -2
- data/lib/qrda-export/catI-r5/qrda_header/_record_target.mustache +9 -0
- data/lib/qrda-export/catI-r5/qrda_templates/encounter_performed.mustache +49 -56
- data/lib/qrda-export/catI-r5/qrda_templates/medication_discharge.mustache +1 -1
- data/lib/qrda-export/catI-r5/qrda_templates/medication_dispensed.mustache +1 -1
- data/lib/qrda-export/catI-r5/qrda_templates/medication_order.mustache +1 -1
- data/lib/qrda-export/catI-r5/qrda_templates/template_partials/_medication_details.mustache +1 -1
- data/lib/qrda-export/catI-r52/qrda1_r52.rb +258 -0
- data/lib/qrda-export/catI-r52/qrda_header/_participant.mustache +8 -0
- data/lib/qrda-export/catI-r52/qrda_header/_record_target.mustache +65 -0
- data/lib/qrda-export/catI-r52/qrda_templates/medication_order.mustache +70 -0
- data/lib/qrda-export/catIII/_header.mustache +2 -4
- data/lib/qrda-export/catIII/qrda_header/_participant_ehr.mustache +4 -1
- data/lib/qrda-export/catIII-r2-1/qrda_header/_participant_ehr.mustache +9 -0
- data/lib/qrda-export/helper/cat1_view_helper.rb +23 -5
- data/lib/qrda-export/helper/view_helper.rb +9 -1
- data/lib/qrda-import/base-importers/section_importer.rb +31 -4
- data/lib/qrda-import/data-element-importers/encounter_performed_importer.rb +12 -12
- data/lib/qrda-import/data-element-importers/medication_discharge_importer.rb +1 -1
- data/lib/qrda-import/data-element-importers/medication_dispensed_importer.rb +1 -1
- data/lib/qrda-import/data-element-importers/medication_order_importer.rb +1 -1
- data/lib/qrda-import/data-element-importers/substance_order_importer.rb +1 -1
- data/lib/qrda-import/data-element-importers/substance_recommended_importer.rb +1 -1
- data/lib/qrda-import/patient_importer.rb +22 -6
- metadata +10 -5
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: b0938369271d07282db5933dda15b47f0cbe346abbeff4a6004a23fcce61e680
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4
|
+
data.tar.gz: 4ff25f7dfda32510cccb638966ab51eb76cb04c7ab31778fb2e95bc0cba88a2c
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5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 3c3c6bd90513f5f83610596a4789a30b0995569efcf7e6598a48f385a00d7cc869265c4f7f6b77c24c3130153df714ad3858d55e4b97f88168282d833e4a2961
|
7
|
+
data.tar.gz: 750f9df81d0cb2c633dbecc2b6be45a77c580dd7bc53defe6cc27ad592e0588cbebd563f3382e7d193f2cfcdf038728f3e01eee1f9fdbb2fc07e3a11f049afdb
|
data/Gemfile
CHANGED
@@ -49,7 +49,7 @@
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|
49
49
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{{/daysSupplied}}
|
50
50
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{{#diagnoses}}
|
51
51
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<div class="div-head-row">
|
52
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-
<div class="div-table-head--no-border"><span class="criteria-heading">Diagnosis{{{
|
52
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+
<div class="div-table-head--no-border"><span class="criteria-heading">Diagnosis:</span> {{{nested_code_string}}} {{{diagnosis_string}}}</div>
|
53
53
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</div>
|
54
54
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{{/diagnoses}}
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55
55
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{{#dischargeDisposition}}
|
@@ -10,6 +10,7 @@ class QdmPatient < Mustache
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10
10
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@patient = patient
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11
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@qdmPatient = patient.qdmPatient
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12
12
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@patient_addresses = patient['addresses']
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+
@patient_email = patient['email']
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@patient_telecoms = patient['telecoms']
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14
15
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end
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15
16
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@@ -35,6 +36,7 @@ class QdmPatient < Mustache
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def patient_telecoms
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@patient_telecoms ||= [CQM::Telecom.new(use: 'HP', value: '555-555-2003')]
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# create formatted telecoms
|
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+
@patient_telecoms << CQM::Telecom.new(use: 'HP', value: @patient_email) if @patient_email
|
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@patient_telecoms.map { |telecom| "(#{telecom['use']}) #{telecom['value']}" }.join("<br>")
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end
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@@ -52,8 +54,14 @@ class QdmPatient < Mustache
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end
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def unit_string
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55
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-
return
|
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-
"#{self['value']} #{self['unit']}"
|
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+
return trimed_value(self['value']).to_s if !self['unit'] || self['unit'] == '1'
|
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+
"#{trimed_value(self['value'])} #{self['unit']}"
|
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+
end
|
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+
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+
def trimed_value(number)
|
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i = number.to_i
|
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f = number.to_f
|
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i == f ? i : f
|
57
65
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end
|
58
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def entity_string
|
@@ -120,15 +128,24 @@ class QdmPatient < Mustache
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|
120
128
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return unit_string if self['value']
|
121
129
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return code_code_system_string if self['code']
|
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130
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|
123
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-
|
131
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+
# Checks to see if the result is a DateTime value, String, or Numeric
|
132
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begin
|
133
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DateTime.parse(self['result'])
|
134
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+
rescue ArgumentError, TypeError
|
135
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# If the value is not numeric, just print out the result
|
136
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self['result'].is_a?(Numeric) ? trimed_value(self['result']) : self['result']
|
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+
end
|
124
138
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end
|
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139
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def nested_code_string
|
127
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code_for_element(self['code'])
|
128
142
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end
|
129
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-
def
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131
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-
|
144
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+
def diagnosis_string
|
145
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dx_string = ''
|
146
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+
dx_string += "</br> rank: #{self['rank']}" if self['rank']
|
147
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+
dx_string += "</br> presentOnAdmissionIndicator: #{self['presentOnAdmissionIndicator']['code']}" if self['presentOnAdmissionIndicator']
|
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dx_string
|
132
149
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end
|
133
150
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134
151
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def end_time?
|
@@ -16,9 +16,12 @@ class Qrda1R5 < Mustache
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@provider = options[:provider]
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@patient_address_option = options[:patient_addresses]
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@patient_telecom_option = options[:patient_telecoms]
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19
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+
@patient_email_option = options[:patient_email]
|
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@performance_period_start = options[:start_time]
|
20
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@performance_period_end = options[:end_time]
|
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22
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@submission_program = options[:submission_program]
|
23
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@medicare_beneficiary_identifier = options[:medicare_beneficiary_identifier]
|
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@hicn = options[:hicn]
|
22
25
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end
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24
27
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def patient_addresses
|
@@ -41,6 +44,15 @@ class Qrda1R5 < Mustache
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41
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JSON.parse(@patient_telecom_option.to_json)
|
42
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end
|
43
46
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|
47
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+
def patient_email
|
48
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+
return unless @patient_email_option
|
49
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+
telecom_email = [CQM::Telecom.new(
|
50
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use: 'HP',
|
51
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value: @patient_email_option
|
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+
)]
|
53
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JSON.parse(telecom_email.to_json)
|
54
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+
end
|
55
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+
|
44
56
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def patient_characteristic_payer
|
45
57
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JSON.parse(@qdmPatient.get_data_elements('patient_characteristic', 'payer').to_json)
|
46
58
|
end
|
@@ -1,7 +1,8 @@
|
|
1
1
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<participant typeCode="DEV">
|
2
2
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<associatedEntity classCode="RGPR">
|
3
3
|
<!-- CMS EHR Certification Number (formerly known as Office of the
|
4
|
-
National Coordinator Certification Number)
|
5
|
-
|
4
|
+
National Coordinator Certification Number). Note, this is a test
|
5
|
+
file, and the provided ID is not for a certified product set. -->
|
6
|
+
<id extension="0015CPV4ZTB4WBU" root="2.16.840.1.113883.3.2074.1"/>
|
6
7
|
</associatedEntity>
|
7
8
|
</participant>
|
@@ -1,6 +1,12 @@
|
|
1
1
|
<recordTarget>
|
2
2
|
<patientRole>
|
3
3
|
<id extension="{{mrn}}" root="1.3.6.1.4.1.115" />
|
4
|
+
{{#medicare_beneficiary_identifier}}
|
5
|
+
<id extension="{{medicare_beneficiary_identifier}}" root="2.16.840.1.113883.4.927" />
|
6
|
+
{{/medicare_beneficiary_identifier}}
|
7
|
+
{{#hicn}}
|
8
|
+
<id extension="{{hicn}}" root="2.16.840.1.113883.4.572" />
|
9
|
+
{{/hicn}}
|
4
10
|
{{#patient_addresses}}
|
5
11
|
<addr use="{{use}}">
|
6
12
|
{{#street}}
|
@@ -15,6 +21,9 @@
|
|
15
21
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{{#patient_telecoms}}
|
16
22
|
<telecom use="{{use}}" value="tel:{{value}}"/>
|
17
23
|
{{/patient_telecoms}}
|
24
|
+
{{#patient_email}}
|
25
|
+
<telecom use="{{use}}" value="mailto:{{value}}"/>
|
26
|
+
{{/patient_email}}
|
18
27
|
<patient>
|
19
28
|
{{#patient}}
|
20
29
|
<name>
|
@@ -1,58 +1,51 @@
|
|
1
1
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<entry>
|
2
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-
<
|
3
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-
<!--Encounter
|
4
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-
<templateId extension="
|
5
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-
|
6
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-
<
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7
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-
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9
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-
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47
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-
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48
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-
|
49
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-
|
50
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-
|
51
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-
{{#relatedTo}}
|
52
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-
<!-- QDM Attribute: relatedTo -->
|
53
|
-
{{> qrda_templates/template_partials/_related_to}}
|
54
|
-
{{/relatedTo}}
|
55
|
-
</encounter>
|
56
|
-
</entryRelationship>
|
57
|
-
</act>
|
2
|
+
<encounter classCode="ENC" moodCode="EVN">
|
3
|
+
<!-- Encounter activities template -->
|
4
|
+
<templateId extension="2015-08-01" root="2.16.840.1.113883.10.20.22.4.49"/>
|
5
|
+
<!-- Encounter performed template -->
|
6
|
+
<templateId extension="2021-08-01" root="2.16.840.1.113883.10.20.24.3.23"/>
|
7
|
+
<id extension="{{object_id}}" root="1.3.6.1.4.1.115"/>
|
8
|
+
<!-- QDM Attribute: Code -->
|
9
|
+
{{> _codes}}
|
10
|
+
<text>{{description}}</text>
|
11
|
+
<statusCode code="completed"/>
|
12
|
+
{{#relevantPeriod}}
|
13
|
+
<!-- QDM Attribute: Relevant Period -->
|
14
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+
{{{relevant_period}}}
|
15
|
+
{{/relevantPeriod}}
|
16
|
+
{{#dischargeDisposition}}
|
17
|
+
<!-- QDM Attribute: Discharge Disposition -->
|
18
|
+
<sdtc:dischargeDispositionCode {{> _code}}/>
|
19
|
+
{{/dischargeDisposition}}
|
20
|
+
{{#authorDatetime}}
|
21
|
+
<!-- QDM Attribute: Author dateTime -->
|
22
|
+
{{> qrda_templates/template_partials/_author}}
|
23
|
+
{{/authorDatetime}}
|
24
|
+
{{#facilityLocations}}
|
25
|
+
<!-- QDM Attribute: Facility Locations -->
|
26
|
+
{{> qrda_templates/template_partials/_facility_location}}
|
27
|
+
{{/facilityLocations}}
|
28
|
+
{{#admissionSource}}
|
29
|
+
<!-- QDM Attribute: Admission Source -->
|
30
|
+
{{> qrda_templates/template_partials/_admission_source}}
|
31
|
+
{{/admissionSource}}
|
32
|
+
{{#participant}}
|
33
|
+
<!-- QDM Attribute: Participant -->
|
34
|
+
<participant typeCode="PRF">
|
35
|
+
{{> qrda_templates/template_partials/_entity}}
|
36
|
+
</participant>
|
37
|
+
{{/participant}}
|
38
|
+
{{#clazz}}
|
39
|
+
<!-- QDM Attribute: Class -->
|
40
|
+
{{> qrda_templates/template_partials/_encounter_class}}
|
41
|
+
{{/clazz}}
|
42
|
+
{{#diagnoses}}
|
43
|
+
<!-- QDM Attribute: Diagnoses -->
|
44
|
+
{{> qrda_templates/template_partials/_encounter_diagnosis_qdm}}
|
45
|
+
{{/diagnoses}}
|
46
|
+
{{#relatedTo}}
|
47
|
+
<!-- QDM Attribute: relatedTo -->
|
48
|
+
{{> qrda_templates/template_partials/_related_to}}
|
49
|
+
{{/relatedTo}}
|
50
|
+
</encounter>
|
58
51
|
</entry>
|
@@ -0,0 +1,258 @@
|
|
1
|
+
require 'mustache'
|
2
|
+
class Qrda1R52 < Mustache
|
3
|
+
include Qrda::Export::Helper::DateHelper
|
4
|
+
include Qrda::Export::Helper::ViewHelper
|
5
|
+
include Qrda::Export::Helper::Cat1ViewHelper
|
6
|
+
include Qrda::Export::Helper::PatientViewHelper
|
7
|
+
include Qrda::Export::Helper::FrequencyHelper
|
8
|
+
include HQMF::Util::EntityHelper
|
9
|
+
|
10
|
+
self.template_path = __dir__
|
11
|
+
|
12
|
+
def initialize(patient, measures, options = {})
|
13
|
+
@patient = patient
|
14
|
+
@qdmPatient = patient.qdmPatient
|
15
|
+
@measures = measures
|
16
|
+
@provider = options[:provider]
|
17
|
+
@patient_address_option = options[:patient_addresses]
|
18
|
+
@patient_telecom_option = options[:patient_telecoms]
|
19
|
+
@patient_email_option = options[:patient_email]
|
20
|
+
@performance_period_start = options[:start_time]
|
21
|
+
@performance_period_end = options[:end_time]
|
22
|
+
@submission_program = options[:submission_program]
|
23
|
+
@medicare_beneficiary_identifier = options[:medicare_beneficiary_identifier]
|
24
|
+
end
|
25
|
+
|
26
|
+
def patient_addresses
|
27
|
+
@patient_address_option ||= [CQM::Address.new(
|
28
|
+
use: 'HP',
|
29
|
+
street: ['202 Burlington Rd.'],
|
30
|
+
city: 'Bedford',
|
31
|
+
state: 'MA',
|
32
|
+
zip: '01730',
|
33
|
+
country: 'US'
|
34
|
+
)]
|
35
|
+
JSON.parse(@patient_address_option.to_json)
|
36
|
+
end
|
37
|
+
|
38
|
+
def patient_telecoms
|
39
|
+
@patient_telecom_option ||= [CQM::Telecom.new(
|
40
|
+
use: 'HP',
|
41
|
+
value: '555-555-2003'
|
42
|
+
)]
|
43
|
+
JSON.parse(@patient_telecom_option.to_json)
|
44
|
+
end
|
45
|
+
|
46
|
+
def patient_email
|
47
|
+
return unless @patient_email_option
|
48
|
+
telecom_email = [CQM::Telecom.new(
|
49
|
+
use: 'HP',
|
50
|
+
value: @patient_email_option
|
51
|
+
)]
|
52
|
+
JSON.parse(telecom_email.to_json)
|
53
|
+
end
|
54
|
+
|
55
|
+
def patient_characteristic_payer
|
56
|
+
JSON.parse(@qdmPatient.get_data_elements('patient_characteristic', 'payer').to_json)
|
57
|
+
end
|
58
|
+
|
59
|
+
def patient_characteristic_birthdate
|
60
|
+
JSON.parse(@qdmPatient.get_data_elements('patient_characteristic', 'birthdate').to_json)
|
61
|
+
end
|
62
|
+
|
63
|
+
def patient_characteristic_sex
|
64
|
+
JSON.parse(@qdmPatient.get_data_elements('patient_characteristic', 'gender').to_json)
|
65
|
+
end
|
66
|
+
|
67
|
+
def patient_characteristic_race
|
68
|
+
JSON.parse(@qdmPatient.get_data_elements('patient_characteristic', 'race').to_json)
|
69
|
+
end
|
70
|
+
|
71
|
+
def patient_characteristic_ethnicity
|
72
|
+
JSON.parse(@qdmPatient.get_data_elements('patient_characteristic', 'ethnicity').to_json)
|
73
|
+
end
|
74
|
+
|
75
|
+
def adverse_event
|
76
|
+
JSON.parse(@qdmPatient.get_data_elements('adverse_event', nil).to_json)
|
77
|
+
end
|
78
|
+
|
79
|
+
def allergy_intolerance
|
80
|
+
JSON.parse(@qdmPatient.get_data_elements('allergy', 'intolerance').to_json)
|
81
|
+
end
|
82
|
+
|
83
|
+
def assessment_order
|
84
|
+
JSON.parse(@qdmPatient.get_data_elements('assessment', 'order').to_json)
|
85
|
+
end
|
86
|
+
|
87
|
+
def assessment_performed
|
88
|
+
JSON.parse(@qdmPatient.get_data_elements('assessment', 'performed').to_json)
|
89
|
+
end
|
90
|
+
|
91
|
+
def assessment_recommended
|
92
|
+
JSON.parse(@qdmPatient.get_data_elements('assessment', 'recommended').to_json)
|
93
|
+
end
|
94
|
+
|
95
|
+
def communication_performed
|
96
|
+
JSON.parse(@qdmPatient.get_data_elements('communication', 'performed').to_json)
|
97
|
+
end
|
98
|
+
|
99
|
+
def diagnosis
|
100
|
+
JSON.parse(@qdmPatient.get_data_elements('condition', nil).to_json)
|
101
|
+
end
|
102
|
+
|
103
|
+
def device_applied
|
104
|
+
JSON.parse(@qdmPatient.get_data_elements('device', 'applied').to_json)
|
105
|
+
end
|
106
|
+
|
107
|
+
def device_order
|
108
|
+
JSON.parse(@qdmPatient.get_data_elements('device', 'order').to_json)
|
109
|
+
end
|
110
|
+
|
111
|
+
def device_recommended
|
112
|
+
JSON.parse(@qdmPatient.get_data_elements('device', 'recommended').to_json)
|
113
|
+
end
|
114
|
+
|
115
|
+
def diagnostic_study_order
|
116
|
+
JSON.parse(@qdmPatient.get_data_elements('diagnostic_study', 'order').to_json)
|
117
|
+
end
|
118
|
+
|
119
|
+
def diagnostic_study_performed
|
120
|
+
JSON.parse(@qdmPatient.get_data_elements('diagnostic_study', 'performed').to_json)
|
121
|
+
end
|
122
|
+
|
123
|
+
def diagnostic_study_recommended
|
124
|
+
JSON.parse(@qdmPatient.get_data_elements('diagnostic_study', 'recommended').to_json)
|
125
|
+
end
|
126
|
+
|
127
|
+
def encounter_order
|
128
|
+
JSON.parse(@qdmPatient.get_data_elements('encounter', 'order').to_json)
|
129
|
+
end
|
130
|
+
|
131
|
+
def encounter_performed
|
132
|
+
JSON.parse(@qdmPatient.get_data_elements('encounter', 'performed').to_json)
|
133
|
+
end
|
134
|
+
|
135
|
+
def encounter_recommended
|
136
|
+
JSON.parse(@qdmPatient.get_data_elements('encounter', 'recommended').to_json)
|
137
|
+
end
|
138
|
+
|
139
|
+
def family_history
|
140
|
+
JSON.parse(@qdmPatient.get_data_elements('family_history', nil).to_json)
|
141
|
+
end
|
142
|
+
|
143
|
+
def immunization_administered
|
144
|
+
JSON.parse(@qdmPatient.get_data_elements('immunization', 'administered').to_json)
|
145
|
+
end
|
146
|
+
|
147
|
+
def immunization_order
|
148
|
+
JSON.parse(@qdmPatient.get_data_elements('immunization', 'order').to_json)
|
149
|
+
end
|
150
|
+
|
151
|
+
def intervention_order
|
152
|
+
JSON.parse(@qdmPatient.get_data_elements('intervention', 'order').to_json)
|
153
|
+
end
|
154
|
+
|
155
|
+
def intervention_performed
|
156
|
+
JSON.parse(@qdmPatient.get_data_elements('intervention', 'performed').to_json)
|
157
|
+
end
|
158
|
+
|
159
|
+
def intervention_recommended
|
160
|
+
JSON.parse(@qdmPatient.get_data_elements('intervention', 'recommended').to_json)
|
161
|
+
end
|
162
|
+
|
163
|
+
def laboratory_test_order
|
164
|
+
JSON.parse(@qdmPatient.get_data_elements('laboratory_test', 'order').to_json)
|
165
|
+
end
|
166
|
+
|
167
|
+
def laboratory_test_performed
|
168
|
+
JSON.parse(@qdmPatient.get_data_elements('laboratory_test', 'performed').to_json)
|
169
|
+
end
|
170
|
+
|
171
|
+
def laboratory_test_recommended
|
172
|
+
JSON.parse(@qdmPatient.get_data_elements('laboratory_test', 'recommended').to_json)
|
173
|
+
end
|
174
|
+
|
175
|
+
def medication_active
|
176
|
+
JSON.parse(@qdmPatient.get_data_elements('medication', 'active').to_json)
|
177
|
+
end
|
178
|
+
|
179
|
+
def medication_administered
|
180
|
+
JSON.parse(@qdmPatient.get_data_elements('medication', 'administered').to_json) + JSON.parse(@qdmPatient.get_data_elements('substance', 'administered').to_json)
|
181
|
+
end
|
182
|
+
|
183
|
+
def medication_discharge
|
184
|
+
JSON.parse(@qdmPatient.get_data_elements('medication', 'discharge').to_json)
|
185
|
+
end
|
186
|
+
|
187
|
+
def medication_dispensed
|
188
|
+
JSON.parse(@qdmPatient.get_data_elements('medication', 'dispensed').to_json)
|
189
|
+
end
|
190
|
+
|
191
|
+
def medication_order
|
192
|
+
JSON.parse(@qdmPatient.get_data_elements('medication', 'order').to_json)
|
193
|
+
end
|
194
|
+
|
195
|
+
def patient_care_experience
|
196
|
+
JSON.parse(@qdmPatient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('patient_care_experience', '') }).to_json)
|
197
|
+
end
|
198
|
+
|
199
|
+
def patient_characteristic_clinical_trial_participant
|
200
|
+
JSON.parse(@qdmPatient.get_data_elements('patient_characteristic', 'clinical_trial_participant').to_json)
|
201
|
+
end
|
202
|
+
|
203
|
+
def patient_characteristic_expired
|
204
|
+
JSON.parse(@qdmPatient.get_data_elements('patient_characteristic', 'expired').to_json)
|
205
|
+
end
|
206
|
+
|
207
|
+
def physical_exam_order
|
208
|
+
JSON.parse(@qdmPatient.get_data_elements('physical_exam', 'order').to_json)
|
209
|
+
end
|
210
|
+
|
211
|
+
def physical_exam_performed
|
212
|
+
JSON.parse(@qdmPatient.get_data_elements('physical_exam', 'performed').to_json)
|
213
|
+
end
|
214
|
+
|
215
|
+
def physical_exam_recommended
|
216
|
+
JSON.parse(@qdmPatient.get_data_elements('physical_exam', 'recommended').to_json)
|
217
|
+
end
|
218
|
+
|
219
|
+
def procedure_order
|
220
|
+
JSON.parse(@qdmPatient.get_data_elements('procedure', 'order').to_json)
|
221
|
+
end
|
222
|
+
|
223
|
+
def procedure_performed
|
224
|
+
JSON.parse(@qdmPatient.get_data_elements('procedure', 'performed').to_json)
|
225
|
+
end
|
226
|
+
|
227
|
+
def procedure_recommended
|
228
|
+
JSON.parse(@qdmPatient.get_data_elements('procedure', 'recommended').to_json)
|
229
|
+
end
|
230
|
+
|
231
|
+
def program_participation
|
232
|
+
JSON.parse(@qdmPatient.get_data_elements('participation', nil).to_json)
|
233
|
+
end
|
234
|
+
|
235
|
+
def provider_care_experience
|
236
|
+
JSON.parse(@qdmPatient.dataElements.where(hqmfOid: { '$in' => HQMF::Util::HQMFTemplateHelper.get_all_hqmf_oids('provider_care_experience', '') }).to_json)
|
237
|
+
end
|
238
|
+
|
239
|
+
def related_person
|
240
|
+
JSON.parse(@qdmPatient.get_data_elements('related_person', nil).to_json)
|
241
|
+
end
|
242
|
+
|
243
|
+
def substance_administered
|
244
|
+
JSON.parse(@qdmPatient.get_data_elements('substance', 'administered').to_json)
|
245
|
+
end
|
246
|
+
|
247
|
+
def substance_order
|
248
|
+
JSON.parse(@qdmPatient.get_data_elements('substance', 'order').to_json)
|
249
|
+
end
|
250
|
+
|
251
|
+
def substance_recommended
|
252
|
+
JSON.parse(@qdmPatient.get_data_elements('substance', 'recommended').to_json)
|
253
|
+
end
|
254
|
+
|
255
|
+
def symptom
|
256
|
+
JSON.parse(@qdmPatient.get_data_elements('symptom', nil).to_json)
|
257
|
+
end
|
258
|
+
end
|
@@ -0,0 +1,8 @@
|
|
1
|
+
<participant typeCode="DEV">
|
2
|
+
<associatedEntity classCode="RGPR">
|
3
|
+
<!-- CMS EHR Certification Number (formerly known as Office of the
|
4
|
+
National Coordinator Certification Number). Note, this is a test
|
5
|
+
file, and the provided ID is not for a certified product set. -->
|
6
|
+
<id extension="0015CPV4ZTB4WBU" root="2.16.840.1.113883.3.2074.1"/>
|
7
|
+
</associatedEntity>
|
8
|
+
</participant>
|
@@ -0,0 +1,65 @@
|
|
1
|
+
<recordTarget>
|
2
|
+
<patientRole>
|
3
|
+
<id extension="{{mrn}}" root="1.3.6.1.4.1.115" />
|
4
|
+
{{#medicare_beneficiary_identifier}}
|
5
|
+
<id extension="{{medicare_beneficiary_identifier}}" root="2.16.840.1.113883.4.927" />
|
6
|
+
{{/medicare_beneficiary_identifier}}
|
7
|
+
{{#patient_addresses}}
|
8
|
+
<addr use="{{use}}">
|
9
|
+
{{#street}}
|
10
|
+
<streetAddressLine>{{.}}</streetAddressLine>
|
11
|
+
{{/street}}
|
12
|
+
<city>{{city}}</city>
|
13
|
+
<state>{{state}}</state>
|
14
|
+
<postalCode>{{zip}}</postalCode>
|
15
|
+
<country>{{country}}</country>
|
16
|
+
</addr>
|
17
|
+
{{/patient_addresses}}
|
18
|
+
{{#patient_telecoms}}
|
19
|
+
<telecom use="{{use}}" value="tel:{{value}}"/>
|
20
|
+
{{/patient_telecoms}}
|
21
|
+
{{#patient_email}}
|
22
|
+
<telecom use="{{use}}" value="mailto:{{value}}"/>
|
23
|
+
{{/patient_email}}
|
24
|
+
<patient>
|
25
|
+
{{#patient}}
|
26
|
+
<name>
|
27
|
+
<given>{{given_name}}</given>
|
28
|
+
<family>{{familyName}}</family>
|
29
|
+
</name>
|
30
|
+
{{/patient}}
|
31
|
+
{{#patient_characteristic_sex}}
|
32
|
+
{{#dataElementCodes}}
|
33
|
+
<administrativeGenderCode {{> _code}}/>
|
34
|
+
{{/dataElementCodes}}
|
35
|
+
{{/patient_characteristic_sex}}
|
36
|
+
{{^patient_characteristic_sex}}
|
37
|
+
<administrativeGenderCode nullFlavor="UNK"/>
|
38
|
+
{{/patient_characteristic_sex}}
|
39
|
+
{{#patient_characteristic_birthdate}}
|
40
|
+
{{{birth_date_time}}}
|
41
|
+
{{/patient_characteristic_birthdate}}
|
42
|
+
{{#patient_characteristic_race}}
|
43
|
+
{{#dataElementCodes}}
|
44
|
+
<raceCode {{> _code}}/>
|
45
|
+
{{/dataElementCodes}}
|
46
|
+
{{/patient_characteristic_race}}
|
47
|
+
{{^patient_characteristic_race}}
|
48
|
+
<raceCode nullFlavor="UNK"/>
|
49
|
+
{{/patient_characteristic_race}}
|
50
|
+
{{#patient_characteristic_ethnicity}}
|
51
|
+
{{#dataElementCodes}}
|
52
|
+
<ethnicGroupCode {{> _code}}/>
|
53
|
+
{{/dataElementCodes}}
|
54
|
+
{{/patient_characteristic_ethnicity}}
|
55
|
+
{{^patient_characteristic_ethnicity}}
|
56
|
+
<ethnicGroupCode nullFlavor="UNK"/>
|
57
|
+
{{/patient_characteristic_ethnicity}}
|
58
|
+
<languageCommunication>
|
59
|
+
<templateId root="2.16.840.1.113883.3.88.11.83.2" assigningAuthorityName="HITSP/C83"/>
|
60
|
+
<templateId root="1.3.6.1.4.1.19376.1.5.3.1.2.1" assigningAuthorityName="IHE/PCC"/>
|
61
|
+
<languageCode code="eng"/>
|
62
|
+
</languageCommunication>
|
63
|
+
</patient>
|
64
|
+
</patientRole>
|
65
|
+
</recordTarget>
|
@@ -0,0 +1,70 @@
|
|
1
|
+
<entry>
|
2
|
+
<!--Medication Order -->
|
3
|
+
<substanceAdministration classCode="SBADM" moodCode="RQO" {{{negation_ind}}}>
|
4
|
+
<templateId root="2.16.840.1.113883.10.20.22.4.42" extension="2014-06-09"/>
|
5
|
+
<!-- Medication, Order template -->
|
6
|
+
<templateId root="2.16.840.1.113883.10.20.24.3.47" extension="2019-12-01"/>
|
7
|
+
<id root="1.3.6.1.4.1.115" extension="{{object_id}}"/>
|
8
|
+
<text>{{description}}</text>
|
9
|
+
<statusCode code="active"/>
|
10
|
+
{{#relevantPeriod}}
|
11
|
+
<!-- QDM Attribute: Relevant Period -->
|
12
|
+
{{{medication_duration_effective_time}}}
|
13
|
+
{{/relevantPeriod}}
|
14
|
+
{{^relevantPeriod}}
|
15
|
+
{{#authorDatetime}}
|
16
|
+
<!-- QDM Attribute: Relevant Period -->
|
17
|
+
{{{medication_duration_author_effective_time}}}
|
18
|
+
{{/authorDatetime}}
|
19
|
+
{{/relevantPeriod}}
|
20
|
+
{{> qrda_templates/template_partials/_medication_details}}
|
21
|
+
<consumable>
|
22
|
+
<manufacturedProduct classCode="MANU">
|
23
|
+
<!-- Medication Information (consolidation) template -->
|
24
|
+
<templateId root="2.16.840.1.113883.10.20.22.4.23" extension="2014-06-09"/>
|
25
|
+
<id root="{{random_id}}"/>
|
26
|
+
<manufacturedMaterial>
|
27
|
+
<!-- QDM Attribute: Code -->
|
28
|
+
{{> _codes}}
|
29
|
+
</manufacturedMaterial>
|
30
|
+
</manufacturedProduct>
|
31
|
+
</consumable>
|
32
|
+
{{#authorDatetime}}
|
33
|
+
<!-- QDM Attribute: Author dateTime -->
|
34
|
+
{{> qrda_templates/template_partials/_author}}
|
35
|
+
{{/authorDatetime}}
|
36
|
+
{{#setting}}
|
37
|
+
<participant typeCode="LOC">
|
38
|
+
<participantRole>
|
39
|
+
<!-- QDM Attribute: Setting -->
|
40
|
+
<code {{> _code}}/>
|
41
|
+
</participantRole>
|
42
|
+
</participant>
|
43
|
+
{{/setting}}
|
44
|
+
{{#prescriber}}
|
45
|
+
<!-- QDM Attribute: Prescriber -->
|
46
|
+
<participant typeCode="PRF">
|
47
|
+
{{> qrda_templates/template_partials/_entity}}
|
48
|
+
</participant>
|
49
|
+
{{/prescriber}}
|
50
|
+
{{#reason}}
|
51
|
+
<!-- QDM Attribute: Reason -->
|
52
|
+
{{> qrda_templates/template_partials/_reason}}
|
53
|
+
{{/reason}}
|
54
|
+
{{#negationRationale}}
|
55
|
+
<!-- QDM Attribute: Negation Rationale -->
|
56
|
+
{{> qrda_templates/template_partials/_reason}}
|
57
|
+
{{/negationRationale}}
|
58
|
+
{{#daysSupplied}}
|
59
|
+
<entryRelationship typeCode="REFR">
|
60
|
+
{{> qrda_templates/template_partials/_days_supplied}}
|
61
|
+
</entryRelationship>
|
62
|
+
{{/daysSupplied}}
|
63
|
+
{{#supply}}
|
64
|
+
<!-- QDM Attribute: Supply -->
|
65
|
+
<entryRelationship typeCode="COMP">
|
66
|
+
{{> qrda_templates/template_partials/_medication_supply_request}}
|
67
|
+
</entryRelationship>
|
68
|
+
{{/supply}}
|
69
|
+
</substanceAdministration>
|
70
|
+
</entry>
|
@@ -3,10 +3,8 @@
|
|
3
3
|
<typeId root="2.16.840.1.113883.1.3" extension="POCD_HD000040"/>
|
4
4
|
<!-- US Realm Header Template Id -->
|
5
5
|
<templateId root="2.16.840.1.113883.10.20.27.1.1" extension="2020-12-01"/>
|
6
|
-
|
7
|
-
|
8
|
-
<templateId root="2.16.840.1.113883.10.20.27.1.2" extension="2021-07-01"/>
|
9
|
-
{{/ry2022_submission?}}
|
6
|
+
<!-- QRDA Category III Report - CMS (V7) -->
|
7
|
+
<templateId root="2.16.840.1.113883.10.20.27.1.2" extension="2022-12-01"/>
|
10
8
|
<!-- This is the globally unique identifier for this QRDA document -->
|
11
9
|
<id root="{{random_id}}"/>
|
12
10
|
<!-- QRDA III document type code -->
|
@@ -1,6 +1,9 @@
|
|
1
1
|
<participant typeCode="DEV">
|
2
2
|
<associatedEntity classCode="RGPR">
|
3
|
-
|
3
|
+
<!-- CMS EHR Certification Number (formerly known as Office of the
|
4
|
+
National Coordinator Certification Number). Note, this is a test
|
5
|
+
file, and the provided ID is not for a certified product set. -->
|
6
|
+
<id root="2.16.840.1.113883.3.2074.1" extension="0015CPV4ZTB4WBU"/>
|
4
7
|
<code code="129465004" displayName="medical record, device" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED-CT"/>
|
5
8
|
</associatedEntity>
|
6
9
|
</participant>
|
@@ -0,0 +1,9 @@
|
|
1
|
+
<participant typeCode="DEV">
|
2
|
+
<associatedEntity classCode="RGPR">
|
3
|
+
<!-- CMS EHR Certification Number (formerly known as Office of the
|
4
|
+
National Coordinator Certification Number). Note, this is a test
|
5
|
+
file, and the provided ID is not for a certified product set. -->
|
6
|
+
<id root="2.16.840.1.113883.3.2074.1" extension="0015CPV4ZTB4WBU"/>
|
7
|
+
<code code="129465004" displayName="medical record, device" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED-CT"/>
|
8
|
+
</associatedEntity>
|
9
|
+
</participant>
|
@@ -55,22 +55,30 @@ module Qrda
|
|
55
55
|
self['value'].to_f
|
56
56
|
end
|
57
57
|
|
58
|
+
def refills_as_repeat_number
|
59
|
+
self['refills'] + 1
|
60
|
+
end
|
61
|
+
|
58
62
|
def dose_quantity_value
|
59
|
-
return "<doseQuantity value=\"#{value_as_float}\" unit=\"#{self['unit']}\"/>" if self['unit']
|
63
|
+
return "<doseQuantity value=\"#{value_as_float}\" unit=\"#{self['unit']}\"/>" if self['unit'] && self['unit'] != ''
|
60
64
|
"<doseQuantity value=\"#{value_as_float}\" />"
|
61
65
|
end
|
62
66
|
|
63
67
|
def result_value
|
64
68
|
return "<value xsi:type=\"CD\" nullFlavor=\"UNK\"/>" unless self['result']
|
65
|
-
|
66
69
|
result_string = if self['result'].is_a? Array
|
67
70
|
result_value_as_string(self['result'][0])
|
68
71
|
elsif self['result'].is_a? Hash
|
69
72
|
result_value_as_string(self['result'])
|
70
73
|
elsif self['result'].is_a? String
|
71
|
-
|
74
|
+
begin
|
75
|
+
DateTime.parse self['result']
|
76
|
+
"<value xsi:type=\"TS\" #{value_or_null_flavor(self['result'])}/>"
|
77
|
+
rescue StandardError
|
78
|
+
"<value xsi:type=\"ST\">#{self['result']}</value>"
|
79
|
+
end
|
72
80
|
elsif !self['result'].nil?
|
73
|
-
|
81
|
+
integer_or_pq(self['result'])
|
74
82
|
end
|
75
83
|
result_string
|
76
84
|
end
|
@@ -79,7 +87,17 @@ module Qrda
|
|
79
87
|
return "<value xsi:type=\"CD\" nullFlavor=\"UNK\"/>" unless result
|
80
88
|
oid = result['system'] || result['codeSystem']
|
81
89
|
return "<value xsi:type=\"CD\" code=\"#{result['code']}\" codeSystem=\"#{oid}\" codeSystemName=\"#{HQMF::Util::CodeSystemHelper.code_system_for(oid)}\"/>" if result['code']
|
82
|
-
return
|
90
|
+
return integer_or_pq(result['value'], result['unit']) if result['unit'] && result['unit'] != ''
|
91
|
+
end
|
92
|
+
|
93
|
+
def integer_or_pq(number, unit = nil)
|
94
|
+
i = number.to_i
|
95
|
+
f = number.to_f
|
96
|
+
if i == f
|
97
|
+
unit ? "<value xsi:type=\"PQ\" value=\"#{i}\" unit=\"#{unit}\"/>" : "<value xsi:type=\"INT\" value=\"#{i}\"/>"
|
98
|
+
else
|
99
|
+
unit ? "<value xsi:type=\"PQ\" value=\"#{f}\" unit=\"#{unit}\"/>" : "<value xsi:type=\"REAL\" value=\"#{f}\"/>"
|
100
|
+
end
|
83
101
|
end
|
84
102
|
|
85
103
|
def authordatetime_or_dispenserid?
|
@@ -4,7 +4,7 @@ module Qrda
|
|
4
4
|
module Helper
|
5
5
|
module ViewHelper
|
6
6
|
def measures
|
7
|
-
@measures.
|
7
|
+
@measures.as_json
|
8
8
|
end
|
9
9
|
|
10
10
|
def random_id
|
@@ -22,6 +22,14 @@ module Qrda
|
|
22
22
|
def submission_program
|
23
23
|
@submission_program
|
24
24
|
end
|
25
|
+
|
26
|
+
def medicare_beneficiary_identifier
|
27
|
+
@medicare_beneficiary_identifier
|
28
|
+
end
|
29
|
+
|
30
|
+
def hicn
|
31
|
+
@hicn
|
32
|
+
end
|
25
33
|
end
|
26
34
|
end
|
27
35
|
end
|
@@ -47,8 +47,8 @@ module QRDA
|
|
47
47
|
entry_qrda_id = extract_id(entry_element, @id_xpath)
|
48
48
|
# Create a hash to map all of entry.ids to the same QRDA ids. This will be used to merge QRDA entries
|
49
49
|
# that represent the same event.
|
50
|
-
@entry_id_map["#{entry_qrda_id.value}
|
51
|
-
@entry_id_map["#{entry_qrda_id.value}
|
50
|
+
@entry_id_map["#{entry_qrda_id.value}***#{entry_qrda_id.namingSystem}"] ||= []
|
51
|
+
@entry_id_map["#{entry_qrda_id.value}***#{entry_qrda_id.namingSystem}"] << entry.id
|
52
52
|
entry.dataElementCodes = extract_codes(entry_element, @code_xpath)
|
53
53
|
extract_dates(entry_element, entry)
|
54
54
|
if @result_xpath
|
@@ -77,7 +77,12 @@ module QRDA
|
|
77
77
|
code_list << code_if_present(code_element)
|
78
78
|
translations = code_element.xpath('cda:translation')
|
79
79
|
translations.each do |translation|
|
80
|
-
|
80
|
+
translation_code = code_if_present(translation)
|
81
|
+
next unless translation_code
|
82
|
+
|
83
|
+
code_list << translation_code
|
84
|
+
@warnings << ValidationError.new(message: "Translation code #{translation_code.system}:#{translation_code.code} may not be used for eCQM calculation by a receiving system. Ensure that the root code includes a code from the eCQM valueset.",
|
85
|
+
location: coded_element.path)
|
81
86
|
end
|
82
87
|
end
|
83
88
|
code_list.compact
|
@@ -193,7 +198,14 @@ module QRDA
|
|
193
198
|
return unless value_element && !value_element['nullFlavor']
|
194
199
|
value = value_element['value']
|
195
200
|
if value.present?
|
196
|
-
|
201
|
+
if ['TS'].include? value_element.at_xpath("@xsi:type")&.value
|
202
|
+
begin
|
203
|
+
return DateTime.parse(value_element['value'])
|
204
|
+
rescue StandardError
|
205
|
+
return nil
|
206
|
+
end
|
207
|
+
end
|
208
|
+
return value.strip.to_f if unitless?(value_element)
|
197
209
|
|
198
210
|
return QDM::Quantity.new(value.strip.to_f, value_element['unit'])
|
199
211
|
elsif value_element['code'].present?
|
@@ -208,6 +220,12 @@ module QRDA
|
|
208
220
|
end
|
209
221
|
end
|
210
222
|
|
223
|
+
def unitless?(value_element)
|
224
|
+
return true if value_element['unit'].nil?
|
225
|
+
return true if value_element['unit'] == '1'
|
226
|
+
return true if value_element['unit'][0] == '{' && value_element['unit'][-1] == '}'
|
227
|
+
end
|
228
|
+
|
211
229
|
def extract_reason(parent_element)
|
212
230
|
return unless @reason_xpath
|
213
231
|
reason_element = parent_element.xpath(@reason_xpath)
|
@@ -254,6 +272,15 @@ module QRDA
|
|
254
272
|
QDM::Quantity.new(scalar_element['value'].to_f, scalar_element['unit'])
|
255
273
|
end
|
256
274
|
|
275
|
+
def extract_refills(parent_element, repeat_number_xpath)
|
276
|
+
repeat_number_element = parent_element.at_xpath(repeat_number_xpath)
|
277
|
+
return unless repeat_number_element && repeat_number_element['value'].present?
|
278
|
+
|
279
|
+
# Refills is the Repeat Number - 1
|
280
|
+
repeat_number = repeat_number_element['value'].to_i
|
281
|
+
repeat_number.positive? ? repeat_number - 1 : 0
|
282
|
+
end
|
283
|
+
|
257
284
|
def extract_components(parent_element)
|
258
285
|
component_elements = parent_element.xpath(@components_xpath)
|
259
286
|
components = []
|
@@ -1,18 +1,18 @@
|
|
1
1
|
module QRDA
|
2
2
|
module Cat1
|
3
3
|
class EncounterPerformedImporter < SectionImporter
|
4
|
-
def initialize(entry_finder = QRDA::Cat1::EntryFinder.new("./cda:entry/cda:
|
4
|
+
def initialize(entry_finder = QRDA::Cat1::EntryFinder.new("./cda:entry/cda:encounter[cda:templateId/@root = '2.16.840.1.113883.10.20.24.3.23']"))
|
5
5
|
super(entry_finder)
|
6
|
-
@id_xpath = './cda:
|
7
|
-
@code_xpath = "./cda:
|
8
|
-
@relevant_period_xpath = "./cda:
|
9
|
-
@author_datetime_xpath = "./cda:
|
10
|
-
@admission_source_xpath = "./cda:
|
11
|
-
@discharge_disposition_xpath = "./
|
12
|
-
@facility_locations_xpath = "./cda:
|
13
|
-
@clazz_xpath = "./cda:entryRelationship/cda:
|
14
|
-
@diagnosis_xpath = "./cda:entryRelationship/cda:
|
15
|
-
@related_to_xpath = "./
|
6
|
+
@id_xpath = './cda:id'
|
7
|
+
@code_xpath = "./cda:code"
|
8
|
+
@relevant_period_xpath = "./cda:effectiveTime"
|
9
|
+
@author_datetime_xpath = "./cda:author[cda:templateId/@root='2.16.840.1.113883.10.20.24.3.155']/cda:time"
|
10
|
+
@admission_source_xpath = "./cda:participant/cda:participantRole[cda:templateId/@root='2.16.840.1.113883.10.20.24.3.151']/cda:code"
|
11
|
+
@discharge_disposition_xpath = "./sdtc:dischargeDispositionCode"
|
12
|
+
@facility_locations_xpath = "./cda:participant[cda:templateId/@root = '2.16.840.1.113883.10.20.24.3.100']"
|
13
|
+
@clazz_xpath = "./cda:entryRelationship/cda:act[cda:templateId/@root='2.16.840.1.113883.10.20.24.3.171']/cda:code"
|
14
|
+
@diagnosis_xpath = "./cda:entryRelationship/cda:observation[cda:templateId/@root='2.16.840.1.113883.10.20.24.3.168']"
|
15
|
+
@related_to_xpath = "./sdtc:inFulfillmentOf1/sdtc:actReference"
|
16
16
|
@entry_class = QDM::EncounterPerformed
|
17
17
|
end
|
18
18
|
|
@@ -27,7 +27,7 @@ module QRDA
|
|
27
27
|
los = encounter_performed.relevantPeriod.high.to_date - encounter_performed.relevantPeriod.low.to_date
|
28
28
|
encounter_performed.lengthOfStay = QDM::Quantity.new(los.to_i, 'd')
|
29
29
|
end
|
30
|
-
entity = extract_entity(entry_element, "./cda:
|
30
|
+
entity = extract_entity(entry_element, "./cda:participant[@typeCode='PRF']")
|
31
31
|
encounter_performed.participant.concat(entity) if entity
|
32
32
|
extract_modifier_code(encounter_performed, entry_element)
|
33
33
|
encounter_performed.relatedTo = extract_related_to(entry_element)
|
@@ -18,7 +18,7 @@ module QRDA
|
|
18
18
|
|
19
19
|
def create_entry(entry_element, nrh = NarrativeReferenceHandler.new)
|
20
20
|
medication_discharge = super
|
21
|
-
medication_discharge.refills =
|
21
|
+
medication_discharge.refills = extract_refills(entry_element, @refills_xpath)
|
22
22
|
medication_discharge.dosage = extract_scalar(entry_element, @dosage_xpath)
|
23
23
|
medication_discharge.supply = extract_scalar(entry_element, @supply_xpath)
|
24
24
|
medication_discharge.frequency = frequency_as_coded_value(entry_element, @frequency_xpath)
|
@@ -19,7 +19,7 @@ module QRDA
|
|
19
19
|
|
20
20
|
def create_entry(entry_element, nrh = NarrativeReferenceHandler.new)
|
21
21
|
medication_dispensed = super
|
22
|
-
medication_dispensed.refills =
|
22
|
+
medication_dispensed.refills = extract_refills(entry_element, @refills_xpath)
|
23
23
|
medication_dispensed.dosage = extract_scalar(entry_element, @dosage_xpath)
|
24
24
|
medication_dispensed.supply = extract_scalar(entry_element, @supply_xpath)
|
25
25
|
medication_dispensed.frequency = frequency_as_coded_value(entry_element, @frequency_xpath)
|
@@ -25,7 +25,7 @@ module QRDA
|
|
25
25
|
medication_order.dosage = extract_scalar(entry_element, @dosage_xpath)
|
26
26
|
medication_order.supply = extract_scalar(entry_element, @supply_xpath)
|
27
27
|
medication_order.frequency = frequency_as_coded_value(entry_element, @frequency_xpath)
|
28
|
-
medication_order.refills =
|
28
|
+
medication_order.refills = extract_refills(entry_element, @refills_xpath)
|
29
29
|
medication_order.route = code_if_present(entry_element.at_xpath(@route_xpath))
|
30
30
|
medication_order.setting = code_if_present(entry_element.at_xpath(@setting_xpath))
|
31
31
|
medication_order.daysSupplied = extract_scalar(entry_element, @days_supplied_xpath)&.value
|
@@ -21,7 +21,7 @@ module QRDA
|
|
21
21
|
substance_order.dosage = extract_scalar(entry_element, @dosage_xpath)
|
22
22
|
substance_order.supply = extract_scalar(entry_element, @supply_xpath)
|
23
23
|
substance_order.frequency = frequency_as_coded_value(entry_element, @frequency_xpath)
|
24
|
-
substance_order.refills =
|
24
|
+
substance_order.refills = extract_refills(entry_element, @refills_xpath)
|
25
25
|
substance_order.route = code_if_present(entry_element.at_xpath(@route_xpath))
|
26
26
|
substance_order.reason = extract_reason(entry_element)
|
27
27
|
substance_order
|
@@ -18,7 +18,7 @@ module QRDA
|
|
18
18
|
substance_recommended = super
|
19
19
|
substance_recommended.dosage = extract_scalar(entry_element, @dosage_xpath)
|
20
20
|
substance_recommended.frequency = frequency_as_coded_value(entry_element, @frequency_xpath)
|
21
|
-
substance_recommended.refills =
|
21
|
+
substance_recommended.refills = extract_refills(entry_element, @refills_xpath)
|
22
22
|
substance_recommended.route = code_if_present(entry_element.at_xpath(@route_xpath))
|
23
23
|
substance_recommended.reason = extract_reason(entry_element)
|
24
24
|
entity = extract_entity(entry_element, "./cda:participant[@typeCode='PRF']")
|
@@ -67,7 +67,7 @@ module QRDA
|
|
67
67
|
codes_modifiers = {}
|
68
68
|
entry_id_map = {}
|
69
69
|
import_data_elements(patient, doc, entry_id_map, codes, codes_modifiers, warnings)
|
70
|
-
normalize_references(patient, entry_id_map)
|
70
|
+
normalize_references(patient, entry_id_map, warnings)
|
71
71
|
get_demographics(patient, doc, codes)
|
72
72
|
[patient, warnings, codes, codes_modifiers]
|
73
73
|
end
|
@@ -80,9 +80,19 @@ module QRDA
|
|
80
80
|
data_elements, id_map = importer.create_entries(context, nrh)
|
81
81
|
new_data_elements = []
|
82
82
|
|
83
|
-
id_map.
|
84
|
-
|
83
|
+
id_map.each_pair do |key, elem_ids|
|
84
|
+
split_id = key.split('***')
|
85
|
+
id_string = "#{split_id[1]}(root), #{split_id[0]}(extension)"
|
86
|
+
warnings << ValidationError.new(message: "Two or more entries share the Id: #{id_string}.") if elem_ids.length > 1
|
87
|
+
elem_id = elem_ids.last
|
85
88
|
data_element = data_elements.find { |de| de.id == elem_id }
|
89
|
+
|
90
|
+
# If a data_element isn't returned, there was an issue parsing the template, provide a warning
|
91
|
+
if data_element.nil?
|
92
|
+
warnings << ValidationError.new(message: "Error parsing template with Id: #{id_string}.")
|
93
|
+
next
|
94
|
+
end
|
95
|
+
|
86
96
|
# Keep the first element with a shared ID
|
87
97
|
new_data_elements << data_element
|
88
98
|
|
@@ -94,7 +104,7 @@ module QRDA
|
|
94
104
|
unique_element_keys << key_elements_for_determining_encounter_uniqueness(data_element)
|
95
105
|
|
96
106
|
# Loop through all other data elements with the same id
|
97
|
-
elem_ids[
|
107
|
+
elem_ids[0,elem_ids.length - 1].each do |dup_id|
|
98
108
|
dup_element = data_elements.find { |de| de.id == dup_id }
|
99
109
|
dup_element_keys = key_elements_for_determining_encounter_uniqueness(dup_element)
|
100
110
|
# See if a previously selected data element shared all of the keys files
|
@@ -134,13 +144,19 @@ module QRDA
|
|
134
144
|
record.deathdate = DateTime.parse(entry_elements.at_xpath("./cda:effectiveTime/cda:low")['value']).to_i
|
135
145
|
end
|
136
146
|
|
137
|
-
def normalize_references(patient, entry_id_map)
|
147
|
+
def normalize_references(patient, entry_id_map, warnings)
|
138
148
|
patient.qdmPatient.dataElements.each do |data_element|
|
139
149
|
next unless data_element.respond_to?(:relatedTo) && data_element.relatedTo
|
140
150
|
|
141
151
|
relations_to_add = []
|
142
152
|
data_element.relatedTo.each do |related_to|
|
143
|
-
|
153
|
+
relation_to_add = entry_id_map["#{related_to['value']}***#{related_to['namingSystem']}"]
|
154
|
+
# Add the relation if it can be found, otherwise return a warning
|
155
|
+
relations_to_add += relation_to_add unless relation_to_add.nil?
|
156
|
+
if relation_to_add.nil?
|
157
|
+
id_warning_str = "Related To Id: #{related_to['namingSystem']}(root), #{related_to['value']}(extension) cannot be found in QRDA file."
|
158
|
+
warnings << ValidationError.new(message: id_warning_str)
|
159
|
+
end
|
144
160
|
end
|
145
161
|
data_element.relatedTo = relations_to_add.map(&:to_s)
|
146
162
|
end
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: cqm-reports
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 4.0
|
4
|
+
version: 4.1.0
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- The MITRE Corporation
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date:
|
11
|
+
date: 2023-11-01 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: cqm-models
|
@@ -89,7 +89,7 @@ dependencies:
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version: 1.8.5
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- - "<"
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- !ruby/object:Gem::Version
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92
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-
version: 1.
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92
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+
version: 1.15.0
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type: :runtime
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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@@ -99,7 +99,7 @@ dependencies:
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version: 1.8.5
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- - "<"
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- !ruby/object:Gem::Version
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-
version: 1.
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102
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+
version: 1.15.0
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- !ruby/object:Gem::Dependency
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name: uuid
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requirement: !ruby/object:Gem::Requirement
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@@ -263,6 +263,11 @@ files:
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- lib/qrda-export/catI-r5/qrda_templates/template_partials/_results.mustache
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- lib/qrda-export/catI-r5/qrda_templates/template_partials/_severity.mustache
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- lib/qrda-export/catI-r5/qrda_templates/template_partials/_status.mustache
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266
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+
- lib/qrda-export/catI-r52/qrda1_r52.rb
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+
- lib/qrda-export/catI-r52/qrda_header/_participant.mustache
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+
- lib/qrda-export/catI-r52/qrda_header/_record_target.mustache
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+
- lib/qrda-export/catI-r52/qrda_templates/medication_order.mustache
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+
- lib/qrda-export/catIII-r2-1/qrda_header/_participant_ehr.mustache
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- lib/qrda-export/catIII/_continuous_variable_value.mustache
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- lib/qrda-export/catIII/_header.mustache
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- lib/qrda-export/catIII/_measure_data.mustache
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@@ -365,7 +370,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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- !ruby/object:Gem::Version
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version: '0'
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requirements: []
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368
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-
rubygems_version: 3.1.
|
373
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+
rubygems_version: 3.1.4
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signing_key:
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specification_version: 4
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summary: A library for import and export of reports for use with electronic Clinical
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