coutinho_assembly 0.2.0 → 0.2.1
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- checksums.yaml +4 -4
- data/Gemfile.lock +1 -1
- data/exe/coutinho_assembly +1 -1
- data/lib/coutinho_assembly/version.rb +1 -1
- metadata +1 -1
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA1:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: 61675a18898e4af4695e22bb80a9f5a7df63c4c9
|
4
|
+
data.tar.gz: 26dc90b85fc305aba349d17a8b45b278a4f39e74
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: d59b5f2eeb189b2816217e6cb1a190d10603b9b6124a620359ddfa747a0e5a93ab3f1bd7c08fa89197fcc3e43ab06f60b66df70b321cf586e1a0ef68ee66f3b4
|
7
|
+
data.tar.gz: 0c1ed6238ba25bfd91fb616640d4f5dd172b96f7fc35c9942a40bbdbb157b5cf3d91e51a0dfb9c18c39d89c5decfc5c62daed8cd5419e6287a56628140dcdfac
|
data/Gemfile.lock
CHANGED
data/exe/coutinho_assembly
CHANGED
@@ -204,7 +204,7 @@ sampling_info.each do |(percent, num_samples)|
|
|
204
204
|
out_dir: sample_assembly_dir,
|
205
205
|
out_prefix: out_prefix,
|
206
206
|
num_threads: num_threads,
|
207
|
-
preset:
|
207
|
+
preset: megahit_preset
|
208
208
|
end
|
209
209
|
rescue Rya::MaxAttemptsExceededError => err
|
210
210
|
Rya::AbortIf.logger.error "Couldn't complete assembly #{out_prefix} after #{num_attempts}. You will have to rerun it manually."
|