coutinho_assembly 0.2.0 → 0.2.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
1
1
  ---
2
2
  SHA1:
3
- metadata.gz: 9cef186eff0a2e1a788f727e0c4f78aac4399a9a
4
- data.tar.gz: 39ad07d3c8328f142070dfd24f5ff48a2b9cd8cc
3
+ metadata.gz: 61675a18898e4af4695e22bb80a9f5a7df63c4c9
4
+ data.tar.gz: 26dc90b85fc305aba349d17a8b45b278a4f39e74
5
5
  SHA512:
6
- metadata.gz: 40821919c72befb6fb038034f4e8734cdfacfa155f2e0cb20ee1c4ec77228d4b914d6b16f66e520e736d852636a40d972709d297aba1290acfd74b0c2f9f5dae
7
- data.tar.gz: 52e8f82160edb9b20eb8db390c3a4ee833d568728457fe57ea3b04cd4e51c5f80079fd6c7c1fcc400e2bdd1ea4ff4f3867e9470ea7cc4d2c1dcb8ec514c39c70
6
+ metadata.gz: d59b5f2eeb189b2816217e6cb1a190d10603b9b6124a620359ddfa747a0e5a93ab3f1bd7c08fa89197fcc3e43ab06f60b66df70b321cf586e1a0ef68ee66f3b4
7
+ data.tar.gz: 0c1ed6238ba25bfd91fb616640d4f5dd172b96f7fc35c9942a40bbdbb157b5cf3d91e51a0dfb9c18c39d89c5decfc5c62daed8cd5419e6287a56628140dcdfac
data/Gemfile.lock CHANGED
@@ -1,7 +1,7 @@
1
1
  PATH
2
2
  remote: .
3
3
  specs:
4
- coutinho_assembly (0.2.0)
4
+ coutinho_assembly (0.2.1)
5
5
 
6
6
  GEM
7
7
  remote: https://rubygems.org/
@@ -204,7 +204,7 @@ sampling_info.each do |(percent, num_samples)|
204
204
  out_dir: sample_assembly_dir,
205
205
  out_prefix: out_prefix,
206
206
  num_threads: num_threads,
207
- preset: ASSEMBLY_PRESET
207
+ preset: megahit_preset
208
208
  end
209
209
  rescue Rya::MaxAttemptsExceededError => err
210
210
  Rya::AbortIf.logger.error "Couldn't complete assembly #{out_prefix} after #{num_attempts}. You will have to rerun it manually."
@@ -1,5 +1,5 @@
1
1
  module CoutinhoAssembly
2
- VERSION = "0.2.0"
2
+ VERSION = "0.2.1"
3
3
 
4
4
  COPYRIGHT = "2019 Ryan Moore"
5
5
  CONTACT = "moorer@udel.edu"
metadata CHANGED
@@ -1,7 +1,7 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: coutinho_assembly
3
3
  version: !ruby/object:Gem::Version
4
- version: 0.2.0
4
+ version: 0.2.1
5
5
  platform: ruby
6
6
  authors:
7
7
  - Ryan Moore