coupler 0.0.1-java

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Files changed (258) hide show
  1. data/.document +5 -0
  2. data/.gitmodules +3 -0
  3. data/.rvmrc +1 -0
  4. data/.vimrc +40 -0
  5. data/Gemfile +27 -0
  6. data/Gemfile.lock +71 -0
  7. data/LICENSE +20 -0
  8. data/NOTES +6 -0
  9. data/README.rdoc +18 -0
  10. data/Rakefile +42 -0
  11. data/TODO +11 -0
  12. data/VERSION +1 -0
  13. data/bin/coupler +7 -0
  14. data/db/.gitignore +6 -0
  15. data/db/migrate/001_initial_schema.rb +166 -0
  16. data/db/migrate/002_stub.rb +4 -0
  17. data/db/migrate/003_stub.rb +4 -0
  18. data/db/migrate/004_create_comparisons.rb +28 -0
  19. data/db/migrate/005_move_database_name.rb +19 -0
  20. data/db/migrate/006_upgrade_comparisons.rb +34 -0
  21. data/db/migrate/007_add_which_to_comparisons.rb +23 -0
  22. data/db/migrate/008_add_result_field_to_transformations.rb +33 -0
  23. data/db/migrate/009_add_generated_flag_to_fields.rb +13 -0
  24. data/db/migrate/010_create_imports.rb +24 -0
  25. data/db/migrate/011_add_primary_key_type.rb +13 -0
  26. data/db/migrate/012_add_transformed_with_to_resources.rb +13 -0
  27. data/db/migrate/013_add_run_count_to_scenarios.rb +13 -0
  28. data/db/migrate/014_add_last_accessed_at_to_some_tables.rb +13 -0
  29. data/db/migrate/015_add_run_number_to_results.rb +15 -0
  30. data/db/migrate/016_fix_scenario_run_count.rb +27 -0
  31. data/db/migrate/017_rename_comparison_columns.rb +14 -0
  32. data/db/migrate/018_fix_scenario_linkage_type.rb +8 -0
  33. data/db/migrate/019_add_columns_to_imports.rb +24 -0
  34. data/db/migrate/020_rename_import_columns.rb +12 -0
  35. data/db/migrate/021_add_fields_to_connections.rb +15 -0
  36. data/db/migrate/022_remove_database_name_from_resources.rb +11 -0
  37. data/features/connections.feature +28 -0
  38. data/features/matchers.feature +35 -0
  39. data/features/projects.feature +11 -0
  40. data/features/resources.feature +62 -0
  41. data/features/scenarios.feature +45 -0
  42. data/features/step_definitions/coupler_steps.rb +145 -0
  43. data/features/step_definitions/matchers_steps.rb +26 -0
  44. data/features/step_definitions/resources_steps.rb +12 -0
  45. data/features/step_definitions/scenarios_steps.rb +7 -0
  46. data/features/step_definitions/transformations_steps.rb +3 -0
  47. data/features/support/env.rb +128 -0
  48. data/features/transformations.feature +22 -0
  49. data/features/wizard.feature +10 -0
  50. data/gfx/coupler-header.svg +213 -0
  51. data/gfx/coupler-sidebar.svg +656 -0
  52. data/gfx/coupler.svg +184 -0
  53. data/gfx/icon.svg +75 -0
  54. data/lib/coupler/base.rb +63 -0
  55. data/lib/coupler/config.rb +128 -0
  56. data/lib/coupler/data_uploader.rb +20 -0
  57. data/lib/coupler/database.rb +31 -0
  58. data/lib/coupler/extensions/connections.rb +57 -0
  59. data/lib/coupler/extensions/exceptions.rb +58 -0
  60. data/lib/coupler/extensions/imports.rb +43 -0
  61. data/lib/coupler/extensions/jobs.rb +21 -0
  62. data/lib/coupler/extensions/matchers.rb +64 -0
  63. data/lib/coupler/extensions/projects.rb +62 -0
  64. data/lib/coupler/extensions/resources.rb +89 -0
  65. data/lib/coupler/extensions/results.rb +100 -0
  66. data/lib/coupler/extensions/scenarios.rb +50 -0
  67. data/lib/coupler/extensions/transformations.rb +70 -0
  68. data/lib/coupler/extensions/transformers.rb +58 -0
  69. data/lib/coupler/extensions.rb +16 -0
  70. data/lib/coupler/helpers.rb +121 -0
  71. data/lib/coupler/import_buffer.rb +48 -0
  72. data/lib/coupler/logger.rb +16 -0
  73. data/lib/coupler/models/common_model.rb +104 -0
  74. data/lib/coupler/models/comparison.rb +166 -0
  75. data/lib/coupler/models/connection.rb +59 -0
  76. data/lib/coupler/models/field.rb +55 -0
  77. data/lib/coupler/models/import.rb +238 -0
  78. data/lib/coupler/models/job.rb +42 -0
  79. data/lib/coupler/models/jobify.rb +17 -0
  80. data/lib/coupler/models/matcher.rb +36 -0
  81. data/lib/coupler/models/project.rb +40 -0
  82. data/lib/coupler/models/resource.rb +287 -0
  83. data/lib/coupler/models/result.rb +92 -0
  84. data/lib/coupler/models/scenario/runner.rb +357 -0
  85. data/lib/coupler/models/scenario.rb +115 -0
  86. data/lib/coupler/models/transformation.rb +117 -0
  87. data/lib/coupler/models/transformer/runner.rb +28 -0
  88. data/lib/coupler/models/transformer.rb +110 -0
  89. data/lib/coupler/models.rb +30 -0
  90. data/lib/coupler/runner.rb +76 -0
  91. data/lib/coupler/scheduler.rb +56 -0
  92. data/lib/coupler.rb +34 -0
  93. data/log/.gitignore +1 -0
  94. data/misc/README +5 -0
  95. data/misc/jruby-json.license +57 -0
  96. data/misc/rack-flash.license +22 -0
  97. data/script/dbconsole.rb +5 -0
  98. data/src/edu/vanderbilt/coupler/Main.java +116 -0
  99. data/src/edu/vanderbilt/coupler/jruby.properties +1 -0
  100. data/tasks/annotations.rake +84 -0
  101. data/tasks/db.rake +120 -0
  102. data/tasks/environment.rake +12 -0
  103. data/tasks/jeweler.rake +43 -0
  104. data/tasks/package.rake +58 -0
  105. data/tasks/rdoc.rake +13 -0
  106. data/tasks/test.rake +63 -0
  107. data/tasks/vendor.rake +43 -0
  108. data/test/README.txt +6 -0
  109. data/test/config.yml +9 -0
  110. data/test/coupler/models/test_import.rb +221 -0
  111. data/test/factories.rb +91 -0
  112. data/test/fixtures/duplicate-keys.csv +5 -0
  113. data/test/fixtures/no-headers.csv +50 -0
  114. data/test/fixtures/people.csv +51 -0
  115. data/test/fixtures/varying-row-size.csv +4 -0
  116. data/test/helper.rb +156 -0
  117. data/test/integration/extensions/test_connections.rb +80 -0
  118. data/test/integration/extensions/test_imports.rb +94 -0
  119. data/test/integration/extensions/test_jobs.rb +52 -0
  120. data/test/integration/extensions/test_matchers.rb +134 -0
  121. data/test/integration/extensions/test_projects.rb +82 -0
  122. data/test/integration/extensions/test_resources.rb +150 -0
  123. data/test/integration/extensions/test_results.rb +89 -0
  124. data/test/integration/extensions/test_scenarios.rb +88 -0
  125. data/test/integration/extensions/test_transformations.rb +113 -0
  126. data/test/integration/extensions/test_transformers.rb +80 -0
  127. data/test/integration/test_field.rb +45 -0
  128. data/test/integration/test_import.rb +78 -0
  129. data/test/integration/test_running_scenarios.rb +379 -0
  130. data/test/integration/test_transformation.rb +56 -0
  131. data/test/integration/test_transforming.rb +154 -0
  132. data/test/table_sets.rb +76 -0
  133. data/test/unit/models/test_common_model.rb +130 -0
  134. data/test/unit/models/test_comparison.rb +619 -0
  135. data/test/unit/models/test_connection.rb +115 -0
  136. data/test/unit/models/test_field.rb +99 -0
  137. data/test/unit/models/test_import.rb +130 -0
  138. data/test/unit/models/test_job.rb +115 -0
  139. data/test/unit/models/test_matcher.rb +82 -0
  140. data/test/unit/models/test_project.rb +102 -0
  141. data/test/unit/models/test_resource.rb +564 -0
  142. data/test/unit/models/test_result.rb +90 -0
  143. data/test/unit/models/test_scenario.rb +199 -0
  144. data/test/unit/models/test_transformation.rb +193 -0
  145. data/test/unit/models/test_transformer.rb +188 -0
  146. data/test/unit/test_base.rb +60 -0
  147. data/test/unit/test_data_uploader.rb +27 -0
  148. data/test/unit/test_database.rb +23 -0
  149. data/test/unit/test_helpers.rb +58 -0
  150. data/test/unit/test_logger.rb +10 -0
  151. data/test/unit/test_models.rb +12 -0
  152. data/test/unit/test_runner.rb +76 -0
  153. data/test/unit/test_scheduler.rb +66 -0
  154. data/uploads/.gitignore +2 -0
  155. data/vendor/java/.gitignore +5 -0
  156. data/webroot/public/css/960.css +1 -0
  157. data/webroot/public/css/dataTables.css +1057 -0
  158. data/webroot/public/css/jquery-ui.css +572 -0
  159. data/webroot/public/css/jquery.treeview.css +68 -0
  160. data/webroot/public/css/reset.css +1 -0
  161. data/webroot/public/css/style.css +504 -0
  162. data/webroot/public/css/text.css +1 -0
  163. data/webroot/public/favicon.ico +0 -0
  164. data/webroot/public/images/12_col.gif +0 -0
  165. data/webroot/public/images/16_col.gif +0 -0
  166. data/webroot/public/images/add.png +0 -0
  167. data/webroot/public/images/ajax-loader.gif +0 -0
  168. data/webroot/public/images/cog.png +0 -0
  169. data/webroot/public/images/coupler.png +0 -0
  170. data/webroot/public/images/foo.png +0 -0
  171. data/webroot/public/images/hammer.png +0 -0
  172. data/webroot/public/images/header.png +0 -0
  173. data/webroot/public/images/home.gif +0 -0
  174. data/webroot/public/images/jobs.gif +0 -0
  175. data/webroot/public/images/sidebar-bottom.png +0 -0
  176. data/webroot/public/images/sidebar.png +0 -0
  177. data/webroot/public/images/treeview-default-line.gif +0 -0
  178. data/webroot/public/images/treeview-default.gif +0 -0
  179. data/webroot/public/images/ui-anim_basic_16x16.gif +0 -0
  180. data/webroot/public/images/ui-bg_flat_0_aaaaaa_40x100.png +0 -0
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  182. data/webroot/public/images/ui-bg_glass_55_fbf9ee_1x400.png +0 -0
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  186. data/webroot/public/images/ui-bg_glass_95_fef1ec_1x400.png +0 -0
  187. data/webroot/public/images/ui-bg_highlight-hard_30_565356_1x100.png +0 -0
  188. data/webroot/public/images/ui-bg_highlight-hard_75_888588_1x100.png +0 -0
  189. data/webroot/public/images/ui-bg_highlight-soft_30_6e3b3a_1x100.png +0 -0
  190. data/webroot/public/images/ui-bg_highlight-soft_35_8e8b8e_1x100.png +0 -0
  191. data/webroot/public/images/ui-bg_highlight-soft_75_cccccc_1x100.png +0 -0
  192. data/webroot/public/images/ui-icons_222222_256x240.png +0 -0
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  197. data/webroot/public/images/ui-icons_ffffff_256x240.png +0 -0
  198. data/webroot/public/js/ajaxupload.js +673 -0
  199. data/webroot/public/js/application.js +40 -0
  200. data/webroot/public/js/jquery-ui.combobox.js +98 -0
  201. data/webroot/public/js/jquery-ui.js +9867 -0
  202. data/webroot/public/js/jquery-ui.min.js +559 -0
  203. data/webroot/public/js/jquery.dataTables.min.js +587 -0
  204. data/webroot/public/js/jquery.min.js +154 -0
  205. data/webroot/public/js/jquery.timeago.js +140 -0
  206. data/webroot/public/js/jquery.tooltip.min.js +19 -0
  207. data/webroot/public/js/jquery.treeview.min.js +15 -0
  208. data/webroot/public/js/resource.js +11 -0
  209. data/webroot/public/js/results.js +56 -0
  210. data/webroot/public/js/transformations.js +95 -0
  211. data/webroot/views/connections/index.erb +5 -0
  212. data/webroot/views/connections/list.erb +34 -0
  213. data/webroot/views/connections/new.erb +55 -0
  214. data/webroot/views/connections/show.erb +36 -0
  215. data/webroot/views/imports/edit.erb +60 -0
  216. data/webroot/views/imports/form.erb +81 -0
  217. data/webroot/views/imports/new.erb +89 -0
  218. data/webroot/views/index.erb +12 -0
  219. data/webroot/views/jobs/index.erb +7 -0
  220. data/webroot/views/jobs/list.erb +24 -0
  221. data/webroot/views/layout.erb +38 -0
  222. data/webroot/views/matchers/form.erb +250 -0
  223. data/webroot/views/matchers/list.erb +32 -0
  224. data/webroot/views/projects/form.erb +14 -0
  225. data/webroot/views/projects/index.erb +96 -0
  226. data/webroot/views/projects/show.erb +24 -0
  227. data/webroot/views/resources/edit.erb +88 -0
  228. data/webroot/views/resources/index.erb +5 -0
  229. data/webroot/views/resources/list.erb +27 -0
  230. data/webroot/views/resources/new.erb +121 -0
  231. data/webroot/views/resources/show.erb +86 -0
  232. data/webroot/views/resources/transform.erb +2 -0
  233. data/webroot/views/results/csv.erb +12 -0
  234. data/webroot/views/results/details.erb +15 -0
  235. data/webroot/views/results/index.erb +2 -0
  236. data/webroot/views/results/list.erb +22 -0
  237. data/webroot/views/results/record.erb +24 -0
  238. data/webroot/views/results/show.erb +68 -0
  239. data/webroot/views/scenarios/index.erb +5 -0
  240. data/webroot/views/scenarios/list.erb +20 -0
  241. data/webroot/views/scenarios/new.erb +99 -0
  242. data/webroot/views/scenarios/run.erb +2 -0
  243. data/webroot/views/scenarios/show.erb +50 -0
  244. data/webroot/views/sidebar.erb +106 -0
  245. data/webroot/views/transformations/create.erb +115 -0
  246. data/webroot/views/transformations/for.erb +16 -0
  247. data/webroot/views/transformations/index.erb +2 -0
  248. data/webroot/views/transformations/list.erb +29 -0
  249. data/webroot/views/transformations/new.erb +126 -0
  250. data/webroot/views/transformations/preview.erb +46 -0
  251. data/webroot/views/transformers/edit.erb +6 -0
  252. data/webroot/views/transformers/form.erb +58 -0
  253. data/webroot/views/transformers/index.erb +2 -0
  254. data/webroot/views/transformers/list.erb +25 -0
  255. data/webroot/views/transformers/new.erb +5 -0
  256. data/webroot/views/transformers/preview.erb +23 -0
  257. data/webroot/views/transformers/show.erb +0 -0
  258. metadata +558 -0

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