commonmeta-ruby 3.7.1 → 3.7.3

data/docs/index.qmd

@@ -0,0 +1,83 @@
+---
+title: Guide
+---
+
+[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.5785519.svg)](https://doi.org/10.5281/zenodo.5785519)
+[![Gem Version](https://badge.fury.io/rb/commonmeta-ruby.svg)](https://badge.fury.io/rb/commonmeta-ruby)
+![GitHub](https://img.shields.io/github/license/front-matter/commonmeta-ruby?logo=MIT)
+
+commonmeta-ruby is a Ruby gem and command-line utility for the conversion of scholarly metadata, including [schema.org](https://schema.org). Based on the [bolognese](https://github.com/datacite/bolognese) gem, but using [commonmeta](https://commonmeta.org) as the intermediate format, and supporting additional metadata formats. A Python version is available at [commonmeta-py](https://github.com/front-matter/commonmeta-py).
+
+## Installation
+
+Requires Ruby 3.0 or later (Ruby 2.x [has reached its end of life](https://endoflife.date/ruby) March 2023). Then add the following to your `Gemfile` to install the
+latest version:
+
+```
+gem 'commonmeta-ruby'
+```
+
+Then run `bundle install` to install into your environment.
+
+You can also install the gem system-wide in the usual way:
+
+```
+gem install commonmeta-ruby
+```
+
+## Commands
+
+Run the `commonmeta` command with either an identifier (DOI or URL) or filename:
+
+```
+commonmeta https://doi.org/10.7554/elife.01567
+```
+
+```
+commonmeta example.xml
+```
+
+commonmeta can read BibTeX files (file extension `.bib`), RIS files (file extension `.ris`), Crossref files (file extension `.xml`), DataCite files and CSL-JSON files.
+
+The input format (e.g. Crossref or BibteX) is automatically detected, but
+you can also provide the format with the `--from` or `-f` flag. The supported
+input formats are listed in the table above.
+
+The output format is determined by the `--to` or `-t` flag, and defaults to `schema_org`.
+
+Show all commands with `commonmeta help`:
+
+```
+Commands:
+  commonmeta                 # convert metadata
+  commonmeta --version, -v   # print the version
+  commonmeta help [COMMAND]  # Describe available commands or one specific command
+```
+
+## Errors
+
+Errors are returned to STDOUT.
+
+All input is validated against the commonmeta JSON schema.
+
+## Supported Metadata Formats
+
+commonmeta-ruby reads and/or writes these metadata formats:
+
+| Format | Name | Content Type | Read | Write |
+| ------ | ---- | ------------ | ---- | ----- |
+| [Commonmeta](https://commonmeta.org) | commonmeta | application/vnd.commonmeta+json | yes | yes |
+| [CrossRef Unixref XML](https://www.crossref.org/schema/documentation/unixref1.1/unixref1.1.html) | crossref | application/vnd.crossref.unixref+xml | yes | yes |
+| [Crossref](https://api.crossref.org) | crossref | application/vnd.crossref+json | yes | no |
+| [DataCite](https://api.datacite.org/) | datacite | application/vnd.datacite.datacite+json | yes | yes |
+| [Schema.org (in JSON-LD)](http://schema.org/) | schema_org | application/vnd.schemaorg.ld+json | yes | yes |
+| [RDF XML](http://www.w3.org/TR/rdf-syntax-grammar/) | rdf_xml | application/rdf+xml | no | yes |
+| [RDF Turtle](http://www.w3.org/TeamSubmission/turtle/) | turtle | text/turtle | no | yes |
+| [CSL-JSON](https://citationstyles.org/) | csl | application/vnd.citationstyles.csl+json | yes | yes |
+| [Formatted text citation](https://citationstyles.org/) | citation | text/x-bibliography | no | yes |
+| [Codemeta](https://codemeta.github.io/) | codemeta | application/vnd.codemeta.ld+json | yes | yes |
+| [Citation File Format (CFF)](https://citation-file-format.github.io/) | cff | application/vnd.cff+yaml | yes | yes |
+| [JATS](https://jats.nlm.nih.gov/) | jats | application/vnd.jats+xml | no | yes |
+| [CSV](https://en.wikipedia.org/wiki/Comma-separated_values) | csv | text/csv | no | yes |
+| [BibTex](http://en.wikipedia.org/wiki/BibTeX) | bibtex | application/x-bibtex | yes | yes |
+| [RIS](http://en.wikipedia.org/wiki/RIS_(file_format)) | ris | application/x-research-info-systems | yes | yes |

data/docs/readers/bibtex_reader.ipynb

@@ -0,0 +1,37 @@
+{
+ "cells": [
+  {
+   "cell_type": "raw",
+   "metadata": {},
+   "source": [
+    "---\n",
+    "title: BibTex Reader\n",
+    "description: |\n",
+    "  This notebook shows how to read metadata in BibTex format.\n",
+    "---"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "## Fetch the metadata"
+   ]
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Ruby 3.2.2",
+   "language": "ruby",
+   "name": "ruby"
+  },
+  "language_info": {
+   "file_extension": ".rb",
+   "mimetype": "application/x-ruby",
+   "name": "ruby",
+   "version": "3.2.2"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}

data/docs/theme.scss

@@ -0,0 +1,7 @@
+/*-- scss:defaults --*/
+$toc-color: #38a169;
+$header-margin-bottom: 0;
+$link-color: #38a169;
+$link-hover-color: #276749;
+$link-decoration: none;
+$navbar-bg: #e5e7eb;

data/docs/utils/doi_utils.ipynb

@@ -0,0 +1,28 @@
+{
+ "cells": [
+  {
+   "cell_type": "raw",
+   "metadata": {},
+   "source": [
+    "---\n",
+    "title: doi_utils\n",
+    "---"
+   ]
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Ruby 3.2.2",
+   "language": "ruby",
+   "name": "ruby"
+  },
+  "language_info": {
+   "file_extension": ".rb",
+   "mimetype": "application/x-ruby",
+   "name": "ruby",
+   "version": "3.2.2"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}

data/docs/writers/bibtex_writer.ipynb

@@ -0,0 +1,39 @@
+{
+ "cells": [
+  {
+   "cell_type": "raw",
+   "metadata": {},
+   "source": [
+    "---\n",
+    "title: BibTex Writer\n",
+    "description: |\n",
+    "  This notebook shows how to generate BibTex metadata from a scholarly resource in commonmeta format generated by commonmeta-ruby.\n",
+    "---"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "## Fetch the metadata\n",
+    "\n",
+    "As with all commonmeta-ruby notebooks, we start by fetching metadata, in this example a journal article via its Crossref DOI, and then convert it to the commonmeta format."
+   ]
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Ruby 3.2.2",
+   "language": "ruby",
+   "name": "ruby"
+  },
+  "language_info": {
+   "file_extension": ".rb",
+   "mimetype": "application/x-ruby",
+   "name": "ruby",
+   "version": "3.2.2"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}

data/lib/commonmeta/cli.rb

@@ -71,8 +71,8 @@ module Commonmeta
 
     desc "", "encode_by_blog"
 
-    def encode_by_blog(blog_id)
-      prefix = get_doi_prefix_by_blog_id(blog_id)
+    def encode_by_blog(blog_slug)
+      prefix = get_doi_prefix_by_blog_slug(blog_slug)
       return nil unless prefix.present?
       puts encode_doi(prefix)
     end
@@ -103,10 +103,10 @@ module Commonmeta
       puts get_json_feed_unregistered
     end
 
-    desc "", "json_feed_not_indexed"
+    desc "", "json_feed_updated"
 
-    def json_feed_not_indexed
-      puts get_json_feed_not_indexed
+    def json_feed_updated
+      puts get_json_feed_updated
     end
 
     desc "", "json_feed_by_blog"
@@ -115,10 +115,10 @@ module Commonmeta
       puts get_json_feed_by_blog(id)
     end
 
-    desc "", "json_feed_blog_id"
+    desc "", "json_feed_blog_slug"
 
-    def json_feed_blog_id(id)
-      puts get_json_feed_blog_id(id)
+    def json_feed_blog_slug(slug)
+      puts get_json_feed_blog_slug(slug)
     end
 
     desc "", "update_ghost_post"

data/lib/commonmeta/readers/json_feed_reader.rb

@@ -190,10 +190,10 @@ module Commonmeta
         posts.map { |post| post["id"] }.first
       end
 
-      def get_json_feed_not_indexed
+      def get_json_feed_updated
         # get JSON Feed items not indexed in Crossref since they have been last updated
 
-        url = json_feed_not_indexed_url
+        url = json_feed_updated_url
         response = HTTP.get(url)
         return { "string" => nil, "state" => "not_found" } unless response.status.success?
 
@@ -212,8 +212,8 @@ module Commonmeta
         blog["items"].map { |item| item["id"] }.first
       end
 
-      def get_json_feed_blog_id(id)
-        # get JSON Feed item by id and return blog id
+      def get_json_feed_blog_slug(id)
+        # get JSON Feed item by id and return blog slug
 
         url = json_feed_item_by_id_url(id)
         response = HTTP.get(url)
@@ -223,10 +223,10 @@ module Commonmeta
         post.to_h.dig("blog", "slug")
       end
 
-      def get_doi_prefix_by_blog_id(blog_id)
+      def get_doi_prefix_by_blog_slug(blog_slug)
         # for generating a random DOI.
 
-        url = json_feed_by_blog_url(blog_id)
+        url = json_feed_by_blog_url(blog_slug)
         response = HTTP.get(url)
         return nil unless response.status.success?
 

data/lib/commonmeta/utils.rb

@@ -1453,8 +1453,8 @@ module Commonmeta
       Base32::URL.decode(id)
     end
 
-    def json_feed_not_indexed_url
-      "https://api.rogue-scholar.org/posts/not_indexed"
+    def json_feed_updated_url
+      "https://api.rogue-scholar.org/posts/updated"
     end
 
     def json_feed_unregistered_url

data/lib/commonmeta/version.rb

@@ -1,5 +1,5 @@
 # frozen_string_literal: true
 
 module Commonmeta
-  VERSION = '3.7.1'
+  VERSION = '3.7.3'
 end

data/spec/cli_spec.rb

@@ -370,18 +370,18 @@ describe Commonmeta::CLI do
       expect { subject.json_feed_unregistered }.to output(/17d0e31c-bc41-42b8-b873-d3dacee61f5c/).to_stdout
     end
     
-    # it "json_feed_not_indexed" do
-    #   expect { subject.json_feed_not_indexed }.to output(/r294649-6f79289-8cw1w/).to_stdout
-    # end
+    it "json_feed_updated" do
+      expect { subject.json_feed_updated }.to output(/bb8932b9-2820-42f8-b22f-f191aaf00e32/).to_stdout
+    end
 
     it "json_feed_by_blog" do
       input = "iphylo"
       expect { subject.json_feed_by_blog input }.to output(/3749f8c4-1ba7-4e51-9dd6-9d9551ad451a/).to_stdout
     end
 
-    it "json_feed_blog_id" do
+    it "json_feed_blog_slug" do
       input = "01a92f9a-f8e0-442b-86e2-11530d9d5635"
-      expect { subject.json_feed_blog_id input }.to output(/eve/).to_stdout
+      expect { subject.json_feed_blog_slug input }.to output(/eve/).to_stdout
     end
   end
 end

data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/json_feed/json_feed_blog_slug.yml

@@ -0,0 +1,71 @@
+---
+http_interactions:
+- request:
+    method: get
+    uri: https://api.rogue-scholar.org/posts/01a92f9a-f8e0-442b-86e2-11530d9d5635
+    body:
+      encoding: ASCII-8BIT
+      string: ''
+    headers:
+      Connection:
+      - close
+      Host:
+      - api.rogue-scholar.org
+      User-Agent:
+      - http.rb/5.1.1
+  response:
+    status:
+      code: 200
+      message: OK
+    headers:
+      Content-Type:
+      - application/json
+      Content-Length:
+      - '3313'
+      Ratelimit-Limit:
+      - '15'
+      Ratelimit-Remaining:
+      - '14'
+      Ratelimit-Reset:
+      - '3'
+      Date:
+      - Mon, 25 Dec 2023 10:38:50 GMT
+      Server:
+      - Fly/9e37a80f (2023-12-22)
+      Via:
+      - 1.1 fly.io
+      Fly-Request-Id:
+      - 01HJG8WMFGNRM35PXT9HSQJYJH-fra
+    body:
+      encoding: UTF-8
+      string: '{"archive_url":"https://wayback.archive-it.org/22123/20231101171300/https://eve.gd/2017/05/07/an-important-note-if-you-have-a-lenovo-g580","authors":[{"name":"Martin
+        Paul Eve","url":"https://orcid.org/0000-0002-5589-8511"}],"blog":{"api":false,"archive_prefix":"https://wayback.archive-it.org/22123/20231101171300/","authors":[{"name":"Martin
+        Paul Eve","url":null}],"backlog":0,"canonical_url":null,"category":"languagesAndLiterature","created_at":1690329600,"current_feed_url":"https://eve.gd/feed/feed.atom","description":null,"favicon":"https://eve.gd/favicon.png","feed_format":"application/atom+xml","feed_url":"https://eve.gd/feed_all.xml","filter":null,"funding":null,"generator":"Jekyll","generator_raw":"Jekyll","home_page_url":"https://eve.gd","id":"z4b9d78","indexed":false,"issn":null,"language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","plan":"Team","prefix":"10.59348","relative_url":"blog","secure":true,"slug":"eve","status":"active","title":"Martin
+        Paul Eve","updated_at":1702425600,"use_api":null,"use_mastodon":false,"user_id":"eb3f6a26-3e38-42ad-b752-250eb2c0bf89","version":"https://jsonfeed.org/version/1.1"},"blog_name":"Martin
+        Paul Eve","blog_slug":"eve","content_text":"The Lenovo G580 comes with Windows
+        8. It is possible to permanently lock\nyourself out of the operating system
+        if you begin with a Microsoft\naccount and migrate this to a local account.
+        Further, you won''t be able\nto rescue the system since *it is impossible
+        to enter the BIOS setup in\nthe machine''s default state if you cannot login
+        to Windows*.\n\nTo fix this:\n\n1.  Disable \"fast boot\" mode in Windows
+        8. You can do this in \"Power\n    Settings\". If you don''t do this, you
+        can''t modify the Windows disk\n    partition when booting from a recovery
+        USB.\n2.  [Update your\n    BIOS](https://download.lenovo.com/consumer/mobiles/62cn97ww_64.exe).\n    Do
+        it now or you won''t be able to unless you can still login to\n    Windows
+        8.\n3.  Go into the BIOS (shutdown the machine then press the small button\n    next
+        to the power button and select \"BIOS setup\"). Then, set an\n    administrator
+        password in the BIOS settings. Then, \"disable secure\n    boot\". This will
+        allow you to boot from a recovery USB stick such as\n    Kali or Ubuntu.\n\nUrgh.
+        A Catch-22 where Microsoft Windows corrupted a login (thanks,\nMicrosoft)
+        and a hardware defect stops you booting into a recovery\nmedium (thanks, Lenovo).\n\n[An
+        important note if you have a Lenovo\nG580](https://eve.gd/2017/05/07/an-important-note-if-you-have-a-lenovo-g580/)\nwas
+        originally published by Martin Paul Eve at [Martin Paul\nEve](https://eve.gd)
+        on May 07, 2017.\n","doi":"https://doi.org/10.59348/dmq66-f5d26","guid":"https://eve.gd/2017/05/07/an-important-note-if-you-have-a-lenovo-g580","id":"01a92f9a-f8e0-442b-86e2-11530d9d5635","image":null,"indexed_at":1696162656,"language":"en","published_at":1494172558,"reference":[],"relationships":[],"summary":"The
+        Lenovo G580 comes with Windows 8. It is possible to permanently lock yourself
+        out of the operating system if you begin with a Microsoft account and migrate
+        this to a local account.\n","tags":[],"title":"An important note if you have
+        a Lenovo G580","updated_at":1494115200,"url":"https://eve.gd/2017/05/07/an-important-note-if-you-have-a-lenovo-g580"}
+
+        '
+  recorded_at: Mon, 25 Dec 2023 10:38:50 GMT
+recorded_with: VCR 6.2.0

data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/json_feed/json_feed_updated.yml

@@ -0,0 +1,186 @@
+---
+http_interactions:
+- request:
+    method: get
+    uri: https://api.rogue-scholar.org/posts/updated
+    body:
+      encoding: ASCII-8BIT
+      string: ''
+    headers:
+      Connection:
+      - close
+      Host:
+      - api.rogue-scholar.org
+      User-Agent:
+      - http.rb/5.1.1
+  response:
+    status:
+      code: 200
+      message: OK
+    headers:
+      Content-Type:
+      - application/json
+      Content-Length:
+      - '25138'
+      Ratelimit-Limit:
+      - '15'
+      Ratelimit-Remaining:
+      - '14'
+      Ratelimit-Reset:
+      - '3'
+      Date:
+      - Wed, 08 Nov 2023 10:07:52 GMT
+      Server:
+      - Fly/442f90d3 (2023-11-07)
+      Via:
+      - 1.1 fly.io
+      Fly-Request-Id:
+      - 01HEQ6E4HTP85T3NK4C16TKDFM-fra
+    body:
+      encoding: UTF-8
+      string: '[{"archive_url":"https://wayback.archive-it.org/22141/20231105110201/https://blogs.fu-berlin.de/open-access-berlin/2023/10/06/veranstaltungshinweise-november-2023","authors":[{"name":"Georg
+        Fischer"}],"blog":{"category":"otherHumanities","description":null,"feed_url":"https://blogs.fu-berlin.de/open-access-berlin/feed/atom/","generator":"WordPress","home_page_url":"https://blogs.fu-berlin.de/open-access-berlin","language":"de","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"oaberlin","status":"active","title":"Open
+        Access Blog Berlin","updated_at":1699429735},"blog_name":"Open Access Blog
+        Berlin","blog_slug":"oaberlin","doi":"https://doi.org/10.59350/bmvf8-z4q23","guid":"https://blogs.fu-berlin.de/open-access-berlin/?p=1977","id":"bb8932b9-2820-42f8-b22f-f191aaf00e32","image":null,"indexed":false,"indexed_at":1699219437,"language":"de","published_at":1696581036,"reference":[],"relationships":[],"summary":"weiter
+        zu Dezember 2023 [folgt in K\u00fcrze] Anmerkung zu dieser Rubrik: Das OABB
+        erstellt monatlich eine \u00dcbersicht \u00fcber Termine und Veranstaltungen
+        zu Open Access und Open Research in Berlin bzw. an Berliner Einrichtungen.
+        Der Fokus liegt dabei auf unseren Partnereinrichtungen und auf Veranstaltungen,
+        die sich an die \u00d6ffentlichkeit richten bzw. die offen sind f\u00fcr Angeh\u00f6rige
+        der Wissenschafts- und Kulturerbeeinrichtungen in Berlin.","tags":["Veranstaltungshinweise"],"title":"Veranstaltungshinweise
+        November 2023","updated_at":1699429735,"url":"https://blogs.fu-berlin.de/open-access-berlin/2023/10/06/veranstaltungshinweise-november-2023"},{"archive_url":"https://wayback.archive-it.org/22124/20231105103706/https://upstream.force11.org/principles-of-open-scholarly-infrastructure-posi-version-1-1-reflections-from-adopters","authors":[{"name":"Ginny
+        Hendricks","url":"https://orcid.org/0000-0002-0353-2702"}],"blog":{"category":"humanities","description":"The
+        community blog for all things Open Research.","feed_url":"https://upstream.force11.org/atom-complete/","generator":"Ghost","home_page_url":"https://upstream.force11.org","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"upstream","status":"active","title":"Upstream","updated_at":1699378833},"blog_name":"Upstream","blog_slug":"upstream","doi":"https://doi.org/10.54900/n6az7-4xb07","guid":"652bb7cb4e902104cd51d525","id":"3d013369-c9fa-4b05-8b5f-ad7e1e2f39a2","image":"https://images.unsplash.com/photo-1529246337709-b1a561ebd175?crop=entropy&cs=tinysrgb&fit=max&fm=jpg&ixid=M3wxMTc3M3wwfDF8c2VhcmNofDEyfHxjb2xvdXIlMjBzdGVwc3xlbnwwfHx8fDE2OTkzMDU0MTN8MA&ixlib=rb-4.0.3&q=80&w=2000","indexed":false,"indexed_at":1699348555,"language":"en","published_at":1699347653,"reference":[],"relationships":[],"summary":"<em>The
+        Upstream platform was created in order to discuss all things open. Open scholarly
+        infrastructure and the need for the community to assess such infrastructures
+        are surely at the heart of enabling the open research movement.","tags":["Interviews","Thought
+        Pieces"],"title":"Principles of Open Scholarly Infrastructure (POSI) version
+        1.1: Reflections from adopters","updated_at":1699378833,"url":"https://upstream.force11.org/principles-of-open-scholarly-infrastructure-posi-version-1-1-reflections-from-adopters"},{"archive_url":"https://wayback.archive-it.org/22124/20231105103706/https://upstream.force11.org/navigating-data-intensive-innovation-the-transition-from-research-data-management-to-research-data-governance","authors":[{"name":"Andrea
+        Chiarelli","url":"https://orcid.org/0000-0001-7336-8330"}],"blog":{"category":"humanities","description":"The
+        community blog for all things Open Research.","feed_url":"https://upstream.force11.org/atom-complete/","generator":"Ghost","home_page_url":"https://upstream.force11.org","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"upstream","status":"active","title":"Upstream","updated_at":1699378833},"blog_name":"Upstream","blog_slug":"upstream","doi":"https://doi.org/10.54900/qxbkv-rth08","guid":"6479cd0251698604a68d4b33","id":"d5bea9a2-5136-4ef1-8a73-0490aabd8b14","image":"https://upstream.force11.org/content/images/2023/06/alina-grubnyak-ZiQkhI7417A-unsplash.jpg","indexed":false,"indexed_at":1699197886,"language":"en","published_at":1686038449,"reference":[],"relationships":[],"summary":"The
+        exponential surge in research data, coupled with the advent of cutting-edge
+        computational tools, is ushering in an era of unprecedented opportunities
+        for research performing organisations. However, with many still in the process
+        of adopting basic research data management practices and support mechanisms,
+        the current state of play is concerning.","tags":["Thought Pieces"],"title":"Navigating
+        data-intensive innovation: The transition from research data management to
+        research data governance","updated_at":1699304092,"url":"https://upstream.force11.org/navigating-data-intensive-innovation-the-transition-from-research-data-management-to-research-data-governance"},{"archive_url":"https://wayback.archive-it.org/22124/20231105103706/https://upstream.force11.org/flowcharts-from-the-f11-cope-data-publishing-ethics-working-group","authors":[{"name":"Iratxe
+        Puebla","url":"https://orcid.org/0000-0003-1258-0746"}],"blog":{"category":"humanities","description":"The
+        community blog for all things Open Research.","feed_url":"https://upstream.force11.org/atom-complete/","generator":"Ghost","home_page_url":"https://upstream.force11.org","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"upstream","status":"active","title":"Upstream","updated_at":1699378833},"blog_name":"Upstream","blog_slug":"upstream","doi":"https://doi.org/10.54900/8ty1h-b7t22","guid":"64932cf93cf1043a4d8b0425","id":"0d86b023-1425-450e-a641-a3e5cc25544b","image":"https://upstream.force11.org/content/images/2023/06/Screen-Shot-2023-06-26-at-11.33.11-AM.png","indexed":false,"indexed_at":1699194850,"language":"en","published_at":1687852853,"reference":[],"relationships":[],"summary":"Recognizing
+        the need for dialogue on best practices around ethical challenges in data
+        publication, the FORCE11 Research Data Publication Ethics Working Group started
+        in early 2021 as a multi-stakeholder community effort involving representatives
+        of data repositories, journals, researchers, institutional research integrity
+        officers and libraries.","tags":["Thought Pieces"],"title":"Announcing new
+        resources from the FORCE11-COPE Research Data Publishing Ethics Working Group:
+        flowcharts!","updated_at":1699304063,"url":"https://upstream.force11.org/flowcharts-from-the-f11-cope-data-publishing-ethics-working-group"},{"archive_url":"https://wayback.archive-it.org/22124/20231105103706/https://upstream.force11.org/fairer-future-for-open-science-choosing-community-over-commercialization-with-equitable-article-processing-charges","authors":[{"name":"Uttkarsha
+        Bhosale","url":"https://orcid.org/0000-0002-4189-8975"},{"name":"Riya Thomas","url":"https://orcid.org/0000-0002-8720-4051"},{"name":"Dr.
+        Gayatri Phadke","url":"https://orcid.org/0000-0003-2206-0031"},{"name":"Anupama
+        Kapadia"}],"blog":{"category":"humanities","description":"The community blog
+        for all things Open Research.","feed_url":"https://upstream.force11.org/atom-complete/","generator":"Ghost","home_page_url":"https://upstream.force11.org","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"upstream","status":"active","title":"Upstream","updated_at":1699378833},"blog_name":"Upstream","blog_slug":"upstream","doi":"https://doi.org/10.54900/ra7z7-q2p46","guid":"6493e4be3cf1043a4d8b045b","id":"271749ff-66df-495a-893b-4bdc73ccc0cd","image":"https://upstream.force11.org/content/images/2023/06/standard-quality-control-collage-concept--1-.jpg","indexed":false,"indexed_at":1699194321,"language":"en","published_at":1688475577,"reference":[],"relationships":[],"summary":"The
+        open access (OA) movement has undoubtedly revolutionized the accessibility
+        of scholarly research, aiming to make knowledge freely available to all. While
+        many countries have embraced OA publishing with supportive policies, a persistent
+        obstacle remains\u2014article processing charges (APCs). These charges/fees
+        have led to a debate within the academic community, questioning whether they
+        align with the best interests of open science.","tags":["Thought Pieces","Original
+        Research"],"title":"A Fairer Future for Open Science: Choosing community over
+        commercialization with equitable article processing charges","updated_at":1699304052,"url":"https://upstream.force11.org/fairer-future-for-open-science-choosing-community-over-commercialization-with-equitable-article-processing-charges"},{"archive_url":"https://wayback.archive-it.org/22096/20231101172748/https://blog.front-matter.io/posts/rogue-scholar-blogs-are-now-searchable","authors":[{"name":"Martin
+        Fenner","url":"https://orcid.org/0000-0003-1419-2405"}],"blog":{"category":"computerAndInformationSciences","description":"The
+        Front Matter Blog covers the intersection of science and technology since
+        2007.","feed_url":"https://blog.front-matter.io/atom-complete/","generator":"Ghost","home_page_url":"https://blog.front-matter.io","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"front_matter","status":"active","title":"Front
+        Matter","updated_at":1699181519},"blog_name":"Front Matter","blog_slug":"front_matter","doi":"https://doi.org/10.53731/j4m27-bdw69","guid":"6544c3a43d863800019a5eec","id":"db56ed1f-6430-4418-b4a5-afa6338cf318","image":"https://images.unsplash.com/photo-1473163928189-364b2c4e1135?crop=entropy&cs=tinysrgb&fit=max&fm=jpg&ixid=M3wxMTc3M3wwfDF8c2VhcmNofDE1fHxzZWFyY2glMjBrZXlzfGVufDB8fHx8MTY5OTE4MTQ2NHww&ixlib=rb-4.0.3&q=80&w=2000","indexed":false,"indexed_at":1699118710,"language":"en","published_at":1699009062,"reference":[],"relationships":[],"summary":"With
+        an update launched yesterday, all blogs that participate in the Rogue Scholar
+        science blog archive are now searchable by blog title, description, language,
+        blogging platform, category (scientific field using the OECD Fields of Science
+        and Technology), and ISSN.","tags":["News"],"title":"Rogue Scholar blogs are
+        now searchable","updated_at":1699181519,"url":"https://blog.front-matter.io/posts/rogue-scholar-blogs-are-now-searchable"},{"archive_url":null,"authors":[{"name":"Kim
+        Hartley"},{"name":"Michelle Barker"}],"blog":{"category":"computerAndInformationSciences","description":null,"feed_url":"https://www.researchsoft.org/feed.xml","generator":"Hugo","home_page_url":"https://researchsoft.org/","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"researchsoft","status":"active","title":"Research
+        Software Alliance","updated_at":1699160484},"blog_name":"Research Software
+        Alliance","blog_slug":"researchsoft","doi":"https://doi.org/10.59350/kjwtp-3yg06","guid":"tag:researchsoft.org,2023:/blog/2023-10/","id":"092b69ee-5f4e-4449-9fdb-34329c8d1444","image":"https://researchsoft.org/blog/2023-10/IMG_3080-1440x1080.jpg","indexed":false,"indexed_at":1698568390,"language":"en","published_at":1698105600,"reference":[],"relationships":[],"summary":"October
+        2023  Authors: Kim Hartley and Michelle Barker  We are proud to report that
+        the second International Research Software Funders Workshop, co-hosted by
+        the Digital Research Alliance of Canada (the Alliance) and the Research Software
+        Alliance (ReSA) from 18-20 September was a great success.","tags":[],"title":"Investing
+        in People: Anticipating the Future of Research Software","updated_at":1699160484,"url":"https://researchsoft.org/blog/2023-10"},{"archive_url":"https://wayback.archive-it.org/22135/20231101173016/https://irights.info/artikel/20-jahre-berliner-erklaerung-open-access-berlin-brandenburg/32078","authors":[{"name":"Georg
+        Fischer"}],"blog":{"category":"law","description":"Urheberrecht und kreatives
+        Schaffen in der digitalen Welt","feed_url":"https://irights.info/feed/atom","generator":"WordPress","home_page_url":"https://irights.info/","language":"de","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"irights","status":"active","title":"iRights.info","updated_at":1698917891},"blog_name":"iRights.info","blog_slug":"irights","doi":"https://doi.org/10.59350/6mhvf-28f30","guid":"https://irights.info/?post_type=custom_artikel&p=32078","id":"c85a507c-9125-40a1-9dc2-da10129b57c6","image":"https://irights.info/wp-content/uploads/2023/11/IMG_20231024_1601265362-490x254.jpg","indexed":false,"indexed_at":1698909349,"language":"de","published_at":1698908451,"reference":[],"relationships":[],"summary":"Open
+        Access f\u00fcr \u00f6ffentliche Forschung und Kultur: Zwei Jahrzehnte ist
+        es schon her, dass sich zahlreiche Organisationen in der <em>Berliner Erkl\u00e4rung</em>
+        daf\u00fcr aussprachen. Wie weit ist die \u00d6ffnung tats\u00e4chlich gekommen?
+        Und was gilt es weiterhin zu tun? Spannende Fragen, die Berliner und Brandenburger
+        Vertreter*innen aus Wissenschaft und Kultur letzte Woche diskutierten.","tags":["Gesellschaft
+        + Kunst","Museen + Archive","Urheberrecht","Wissen + Open Access","Wissenschaft"],"title":"20
+        Jahre Berliner Erkl\u00e4rung f\u00fcr Open Access: Wie ist die Lage in Berlin
+        und Brandenburg?","updated_at":1698917891,"url":"https://irights.info/artikel/20-jahre-berliner-erklaerung-open-access-berlin-brandenburg/32078"},{"archive_url":"https://wayback.archive-it.org/22135/20231101173016/https://irights.info/artikel/urheberrecht-schule-unterrichtsschranke-%C2%A760a-urhg/32073","authors":[{"name":"Till
+        Kreutzer"}],"blog":{"category":"law","description":"Urheberrecht und kreatives
+        Schaffen in der digitalen Welt","feed_url":"https://irights.info/feed/atom","generator":"WordPress","home_page_url":"https://irights.info/","language":"de","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"irights","status":"active","title":"iRights.info","updated_at":1698917891},"blog_name":"iRights.info","blog_slug":"irights","doi":"https://doi.org/10.59350/ekr0w-r5r66","guid":"https://irights.info/?post_type=custom_artikel&p=32073","id":"fc382624-1e55-48df-a09b-853674644716","image":"https://irights.info/wp-content/uploads/2023/09/Schule-150x213.png","indexed":false,"indexed_at":1698214609,"language":"de","published_at":1698213654,"reference":[],"relationships":[],"summary":"Das
+        Urheberrecht enth\u00e4lt Ausnahmen, die die Arbeit in Bildungseinrichtungen
+        leichter machen. Eine davon ist die sogenannte Unterrichtsschranke (\u00a7
+        60a UrhG). iRights.info erkl\u00e4rt die Regelung und gibt Tipps f\u00fcr
+        die Praxis. Die Unterrichtsschranke erleichtert es, urheberrechtlich gesch\u00fctztes
+        Fremdmaterial zu Bildungszwecken zu nutzen.","tags":["Bildung + OER","Grundwissen","Urheberrecht","Schrankenbestimmungen","Schule"],"title":"Urheberrecht
+        in Schulen: Welche Nutzungen die Unterrichtsschranke erlaubt","updated_at":1698908961,"url":"https://irights.info/artikel/urheberrecht-schule-unterrichtsschranke-%C2%A760a-urhg/32073"},{"archive_url":"https://wayback.archive-it.org/22135/20231101173016/https://irights.info/artikel/urheberrecht-schule-wissenschaft-bmbf/32021","authors":[{"name":"Redaktion
+        iRights.info"}],"blog":{"category":"law","description":"Urheberrecht und kreatives
+        Schaffen in der digitalen Welt","feed_url":"https://irights.info/feed/atom","generator":"WordPress","home_page_url":"https://irights.info/","language":"de","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"irights","status":"active","title":"iRights.info","updated_at":1698917891},"blog_name":"iRights.info","blog_slug":"irights","doi":"https://doi.org/10.59350/mbc9d-jet17","guid":"https://irights.info/?post_type=custom_artikel&p=32021","id":"f0a7cab6-67dd-48f2-b8be-f59f91254e07","image":"https://irights.info/wp-content/uploads/2023/09/Schule-150x213.png","indexed":false,"indexed_at":1698228321,"language":"de","published_at":1693829213,"reference":[],"relationships":[],"summary":"Darf
+        ich meinen Unterricht aufzeichen? Wem geh\u00f6ren die Rechte an meinem Aufsatz?
+        Und wie war das nochmal mit dem Zitatrecht? In Schule und Wissenschaft stellen
+        sich vielf\u00e4ltige Fragen rund ums Urheberrecht. Zwei neue Handreichungen
+        des BMBF helfen mit leicht verst\u00e4ndlichen und praxisnahen Antworten,
+        konzipiert und erarbeitet von Till Kreutzer und Georg Fischer.","tags":["Autor
+        + Text","Creative Commons + Lizenzen","Urheberrecht","Wissen + Open Access","Wissenschaft"],"title":"Urheberrecht
+        in Schule und Wissenschaft: Zwei neue Handreichungen unterst\u00fctzen bei
+        Alltagsfragen","updated_at":1698677589,"url":"https://irights.info/artikel/urheberrecht-schule-wissenschaft-bmbf/32021"},{"archive_url":"https://wayback.archive-it.org/22125/20231105110316/https://opencitations.hypotheses.org/3488","authors":[{"name":"Chiara
+        Di Giambattista"}],"blog":{"category":"socialSciences","description":"The
+        blog of the OpenCitations Infrastructure","feed_url":"https://opencitations.hypotheses.org/feed/atom/","generator":"WordPress","home_page_url":"https://opencitations.hypotheses.org","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"opencitations","status":"active","title":"OpenCitations
+        blog","updated_at":1698658626},"blog_name":"OpenCitations blog","blog_slug":"opencitations","doi":"https://doi.org/10.59350/canw4-3xd10","guid":"https://opencitations.hypotheses.org/?p=3488","id":"77e770e0-74be-46f4-b800-9f8dc6435741","image":null,"indexed":false,"indexed_at":1698180833,"language":"en","published_at":1697558939,"reference":[],"relationships":[],"summary":"In
+        OpenCitations, we like to define our infrastructure organization as \u201ccommunity-based\u201d
+        and \u201ccommunity-driven\u201d, and we&nbsp;really&nbsp;mean it. The support
+        coming from the number of academic libraries and consortia coming after&nbsp;OpenCitations\u2019
+        involvement in the 2nd SCOSS funding cycle&nbsp;has made it possible, starting
+        from 2020, to make OpenCitations develop from a small university project based
+        on time-limited grant incomes to being an","tags":["Open Abstracts","Open
+        Access","Open Citations","Open Scholarship","Open Science"],"title":"OpenCitations
+        needs you: support the change in research practices","updated_at":1698658626,"url":"https://opencitations.hypotheses.org/3488"},{"archive_url":"https://wayback.archive-it.org/22153/20231105213934/https://svpow.com/2023/10/28/facial-hair-of-the-mesozoic-bob-nicholls-edition-part-2-only-ten-years-late","authors":[{"name":"Mike
+        Taylor"}],"blog":{"category":"earthAndRelatedEnvironmentalSciences","description":"SV-POW!  ...  All
+        sauropod vertebrae, except when we''re talking about Open Access","feed_url":"https://svpow.com/feed/atom/","generator":"WordPress.com","home_page_url":"https://svpow.com","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"svpow","status":"active","title":"Sauropod
+        Vertebra Picture of the Week","updated_at":1698530723},"blog_name":"Sauropod
+        Vertebra Picture of the Week","blog_slug":"svpow","doi":"https://doi.org/10.59350/tfpdy-zkt79","guid":"https://svpow.com/?p=21347","id":"eec545af-44fd-4663-bcab-75d5c8de8bb1","image":"https://svpow.files.wordpress.com/2023/10/bob-nicholls-sideburns.jpeg?w=480&h=646","indexed":false,"indexed_at":1698526380,"language":"en","published_at":1698525657,"reference":[],"relationships":[],"summary":"Back
+        in 2013, we showed you Bob Nicholls\u2019 beautiful sketch \u201cThe Giant
+        &amp; Company\u201d, featuring a giant Apatosaurus with a shaggy beard running
+        along its neck.","tags":["Art","Bob Nicholls","Diplodocids","Life Restorations","Speculation"],"title":"Facial
+        hair of the Mesozoic: Bob Nicholls edition, part 2 (only ten years late)","updated_at":1698530723,"url":"https://svpow.com/2023/10/28/facial-hair-of-the-mesozoic-bob-nicholls-edition-part-2-only-ten-years-late"},{"archive_url":"https://wayback.archive-it.org/22096/20231101172748/https://blog.front-matter.io/posts/using-twitter-at-the-asco-conference","authors":[{"name":"Martin
+        Fenner","url":"https://orcid.org/0000-0003-1419-2405"}],"blog":{"category":"computerAndInformationSciences","description":"The
+        Front Matter Blog covers the intersection of science and technology since
+        2007.","feed_url":"https://blog.front-matter.io/atom-complete/","generator":"Ghost","home_page_url":"https://blog.front-matter.io","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"front_matter","status":"active","title":"Front
+        Matter","updated_at":1699181519},"blog_name":"Front Matter","blog_slug":"front_matter","doi":"https://doi.org/10.53731/r294649-6f79289-8cw55","guid":"62d42bbd41e317003df48e00","id":"b8f01608-05af-41a8-aa71-7238ddea1677","image":"https://blog.front-matter.io/content/images/2023/10/4691440146_bcaea61ee0-1.jpg","indexed":null,"indexed_at":1689007007,"language":"en","published_at":1276560000,"reference":[],"relationships":[],"summary":"Last
+        week I attended the annual meeting of the American Society of Clinical Oncology
+        (ASCO) in Chicago. For my work it is the most important scientific meeting
+        of the year, and it is also by far the biggest with more than 30.000 participants.
+        Blogging is a great way to report from conferences, and for me <em>FriendFeed</em>
+        is the best microblogging tool to do that.","tags":["Meeting Report"],"title":"Using
+        Twitter at the ASCO Conference","updated_at":1698521115,"url":"https://blog.front-matter.io/posts/using-twitter-at-the-asco-conference"},{"archive_url":"https://wayback.archive-it.org/22096/20231101172748/https://blog.front-matter.io/posts/what-is-scholarly-markdown","authors":[{"name":"Martin
+        Fenner","url":"https://orcid.org/0000-0003-1419-2405"}],"blog":{"category":"computerAndInformationSciences","description":"The
+        Front Matter Blog covers the intersection of science and technology since
+        2007.","feed_url":"https://blog.front-matter.io/atom-complete/","generator":"Ghost","home_page_url":"https://blog.front-matter.io","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"front_matter","status":"active","title":"Front
+        Matter","updated_at":1699181519},"blog_name":"Front Matter","blog_slug":"front_matter","doi":"https://doi.org/10.53731/r294649-6f79289-8cw1c","guid":"62d42bbd41e317003df48d87","id":"3850bdcb-6858-4883-a9e9-b474d0bc6f45","image":"https://blog.front-matter.io/content/images/2022/08/DALL-E-2022-08-29-11.57.15---Edward-hopper-oil-painting-of-a-garden-gnome-with-an-umbrella-under-the-Golden-Gate-Bridge.png","indexed":null,"indexed_at":1689007007,"language":"en","published_at":1371489360,"reference":[],"relationships":[],"summary":"One
+        of the important discussions taking place at the Markdown for Science workshop
+        last weekend was about the definition of Scholarly Markdown.","tags":["Meeting
+        Report"],"title":"What is Scholarly Markdown?","updated_at":1698520325,"url":"https://blog.front-matter.io/posts/what-is-scholarly-markdown"},{"archive_url":null,"authors":[{"name":"Roderic
+        Page","url":"https://orcid.org/0000-0002-7101-9767"}],"blog":{"category":"computerAndInformationSciences","description":"Rants,
+        raves (and occasionally considered opinions) on phyloinformatics, taxonomy,
+        and biodiversity informatics.  For more ranty and less considered opinions,
+        see my <a href=\"https://twitter.com/rdmpage\">Twitter feed</a>.<br />ISSN
+        2051-8188. Written content on this site is licensed under a <a href=\"https://creativecommons.org/licenses/by/4.0/\">Creative
+        Commons Attribution 4.0 International license</a>.","feed_url":"https://iphylo.blogspot.com/feeds/posts/default","generator":"Blogger","home_page_url":"https://iphylo.blogspot.com/","language":"en","license":"https://creativecommons.org/licenses/by/4.0/legalcode","slug":"iphylo","status":"active","title":"iPhylo","updated_at":1698394696},"blog_name":"iPhylo","blog_slug":"iphylo","doi":"https://doi.org/10.59350/m59qn-22v52","guid":"tag:blogger.com,1999:blog-16081779.post-903668539491051583","id":"087fc7fc-c157-414a-a7b6-00503a55b521","image":"https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjaJx_5psYTAPfRLaomxACMxZ5Ant1peCHJixf0PeYP82k2uw9vOq4P2Q-HzSakV8q5aSmfqs0X_J_OJmnnhttknlwVYeEguQaxhk4fWi0lKvh_KzugoZWd_MjHmXcImkuMVbJPxXmwln6-Ah7iy4elXNGhfhmofrZbHrgcc3VC7E7lrVd05Utw/s72-c/Screenshot%202023-10-26%20at%2013.30.11.png","indexed":false,"indexed_at":1698333872,"language":"en","published_at":1698333060,"reference":[],"relationships":[],"summary":"This
+        blog post documents my attempts to create links between two major resources
+        for plant taxonomy: JSTOR\u2019s Global Plants and GBIF, specifically between
+        type specimens in JSTOR and the corresponding occurrence in GBIF. The TL;DR
+        is that I have tried to map 1,354,861 records for type specimens from JSTOR
+        to the equivalent record in GBIF, and managed to find 903,945 (67%) matches.
+        Why do this? Why do this?","tags":[],"title":"Where are the plant type specimens?
+        Mapping JSTOR Global Plants to GBIF","updated_at":1698394696,"url":"https://iphylo.blogspot.com/2023/10/where-are-plant-type-specimens-mapping.html"}]
+
+        '
+  recorded_at: Wed, 08 Nov 2023 10:07:52 GMT
+recorded_with: VCR 6.2.0