commonmeta-ruby 3.4.5 → 3.5
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- checksums.yaml +4 -4
- data/Gemfile.lock +2 -2
- data/lib/commonmeta/author_utils.rb +103 -71
- data/lib/commonmeta/crossref_utils.rb +31 -25
- data/lib/commonmeta/metadata.rb +2 -8
- data/lib/commonmeta/metadata_utils.rb +4 -3
- data/lib/commonmeta/readers/bibtex_reader.rb +3 -3
- data/lib/commonmeta/readers/cff_reader.rb +7 -6
- data/lib/commonmeta/readers/codemeta_reader.rb +3 -3
- data/lib/commonmeta/readers/crossref_reader.rb +3 -5
- data/lib/commonmeta/readers/crossref_xml_reader.rb +7 -6
- data/lib/commonmeta/readers/csl_reader.rb +3 -4
- data/lib/commonmeta/readers/datacite_reader.rb +3 -5
- data/lib/commonmeta/readers/json_feed_reader.rb +2 -2
- data/lib/commonmeta/readers/npm_reader.rb +2 -2
- data/lib/commonmeta/readers/ris_reader.rb +1 -1
- data/lib/commonmeta/readers/schema_org_reader.rb +3 -3
- data/lib/commonmeta/schema_utils.rb +1 -1
- data/lib/commonmeta/utils.rb +4 -2
- data/lib/commonmeta/version.rb +1 -1
- data/lib/commonmeta/writers/bibtex_writer.rb +1 -1
- data/lib/commonmeta/writers/cff_writer.rb +5 -4
- data/lib/commonmeta/writers/codemeta_writer.rb +4 -2
- data/lib/commonmeta/writers/csv_writer.rb +4 -2
- data/lib/commonmeta/writers/datacite_writer.rb +1 -1
- data/lib/commonmeta/writers/jats_writer.rb +9 -5
- data/lib/commonmeta/writers/ris_writer.rb +2 -1
- data/lib/commonmeta/writers/schema_org_writer.rb +6 -3
- data/resources/{commonmeta_v0.9.3.json → commonmeta_v0.10.json} +62 -46
- data/spec/author_utils_spec.rb +16 -16
- data/spec/cli_spec.rb +1 -1
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_crossref_metadata/missing_contributor.yml +307 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_datacite_metadata/SoftwareSourceCode.yml +76 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/book_oup.yml +107 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/journal_article_plos.yml +407 -0
- data/spec/metadata_spec.rb +2 -2
- data/spec/readers/bibtex_reader_spec.rb +5 -5
- data/spec/readers/cff_reader_spec.rb +127 -127
- data/spec/readers/codemeta_reader_spec.rb +11 -11
- data/spec/readers/crossref_reader_spec.rb +831 -835
- data/spec/readers/crossref_xml_reader_spec.rb +899 -901
- data/spec/readers/csl_reader_spec.rb +33 -33
- data/spec/readers/datacite_reader_spec.rb +106 -103
- data/spec/readers/json_feed_reader_spec.rb +40 -40
- data/spec/readers/npm_reader_spec.rb +32 -33
- data/spec/readers/ris_reader_spec.rb +36 -36
- data/spec/readers/schema_org_reader_spec.rb +284 -284
- data/spec/writers/codemeta_writer_spec.rb +19 -20
- data/spec/writers/crossref_xml_writer_spec.rb +73 -37
- data/spec/writers/datacite_writer_spec.rb +1 -1
- metadata +7 -3
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Olah","year":"2002","journal-title":"Biochem Soc Trans"},{"key":"ref5","first-page":"308","article-title":"Molecular
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117
|
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118
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isomerase locus.","volume":"58","author":"M Watanabe","year":"1996","journal-title":"Am
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Res"},{"key":"ref8","doi-asserted-by":"crossref","first-page":"336","DOI":"10.1007\/BF00291364","article-title":"Prevalence
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126
|
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of partial deficiency of red cell triosephosphate isomerase in Germany\u2013a
|
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|
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study of 3000 people.","volume":"67","author":"SW Eber","year":"1984","journal-title":"Hum
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128
|
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Genet"},{"key":"ref9","first-page":"663","article-title":"Search for mutations
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129
|
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altering protein charge and\/or function in children of atomic bomb survivors:
|
130
|
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final report.","volume":"42","author":"JV Neel","year":"1988","journal-title":"Am
|
131
|
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|
132
|
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of enzyme deficiency variants in erythrocytes of newborn infants.","volume":"78","author":"HW
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Mohrenweiser","year":"1981","journal-title":"Proc Natl Acad Sci U S A"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"195","DOI":"10.1111\/j.1365-2362.1979.tb00923.x","article-title":"Hereditary
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134
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deficiency of triosephosphate isomerase in four unrelated families.","volume":"9","author":"SW
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135
|
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Eber","year":"1979","journal-title":"Eur J Clin Invest"},{"key":"ref12","doi-asserted-by":"crossref","first-page":"837","DOI":"10.1093\/genetics\/123.4.837","article-title":"Characterization
|
136
|
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of triosephosphate isomerase mutants with reduced enzyme activity in Mus musculus.","volume":"123","author":"S
|
137
|
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Merkle","year":"1989","journal-title":"Genetics"},{"key":"ref13","doi-asserted-by":"crossref","first-page":"437","DOI":"10.1006\/jtbi.1996.0184","article-title":"Triosephosphate
|
138
|
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isomerase deficiency: predictions and facts.","volume":"182","author":"F Orosz","year":"1996","journal-title":"J
|
139
|
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triose-phosphate isomerase deficiency: a single amino acid substitution results
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141
|
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in a thermolabile enzyme.","volume":"83","author":"IO Daar","year":"1986","journal-title":"Proc
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142
|
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Natl Acad Sci U S A"},{"key":"ref15","doi-asserted-by":"crossref","first-page":"290","DOI":"10.1002\/(SICI)1098-1004(1997)10:4<290::AID-HUMU4>3.0.CO;2-L","article-title":"Evidence
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|
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|
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|
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|
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a thermolabile electromorph variant, TPI-Manchester.","volume":"88","author":"BA
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Perry","year":"1992","journal-title":"Hum Genet"},{"key":"ref17","first-page":"1130","article-title":"Triose
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phosphate isomerase deficiency in 3 French families: two novel null alleles,
|
150
|
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|
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codon (TPI Paris).","volume":"96","author":"C Valentin","year":"2000","journal-title":"Blood"},{"key":"ref18","first-page":"1260","article-title":"Human
|
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triosephosphate isomerase deficiency resulting from mutation of Phe-240.","volume":"52","author":"ML
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Chang","year":"1993","journal-title":"Am J Hum Genet"},{"key":"ref19","doi-asserted-by":"crossref","first-page":"486","DOI":"10.1007\/BF00216456","article-title":"Hereditary
|
154
|
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triosephosphate isomerase (TPI) deficiency: two severely affected brothers
|
155
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one with and one without neurological symptoms.","volume":"92","author":"S
|
156
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Hollan","year":"1993","journal-title":"Hum Genet"},{"key":"ref20","first-page":"929","article-title":"[Glycolytic
|
157
|
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enzyme defects and neurodegeneration].","volume":"192","author":"S Hollan","year":"1998","journal-title":"C
|
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R Seances Soc Biol Fil"},{"key":"ref21","doi-asserted-by":"crossref","first-page":"10362","DOI":"10.1073\/pnas.94.19.10362","article-title":"Search
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|
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for the pathogenesis of the differing phenotype in two compound heterozygote
|
160
|
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|
161
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|
162
|
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lipids in triose-phosphate isomerase deficiency.","volume":"92","author":"S
|
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|
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|
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association of mutant triosephosphate isomerase to red cell membranes and
|
165
|
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to brain microtubules.","volume":"97","author":"F Orosz","year":"2000","journal-title":"Proc
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|
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167
|
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vectors for the controlled expression of heterologous proteins in different
|
168
|
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|
169
|
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efficient and economic enhancer mix for PCR.","volume":"347","author":"M Ralser","year":"2006","journal-title":"Biochem
|
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|
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|
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|
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deletion strains derived from <italic>Saccharomyces cerevisiae<\/italic> S288C:
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|
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|
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|
174
|
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protein interaction network links GIT1, an enhancer of huntingtin aggregation,
|
175
|
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|
176
|
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Cell"},{"key":"ref28","doi-asserted-by":"crossref","first-page":"339","DOI":"10.1007\/BF00340712","article-title":"High
|
177
|
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efficiency transformation of intact yeast cells using single stranded nucleic
|
178
|
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acids as a carrier.","volume":"16","author":"RH Schiestl","year":"1989","journal-title":"Curr
|
179
|
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|
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|
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production in a triose phosphate isomerase deficient mutant of <italic>Saccharomyces
|
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|
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cerevisiae<\/italic>.","volume":"12","author":"C Compagno","year":"1996","journal-title":"Biotechnol
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182
|
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|
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|
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|
185
|
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effects of seven different blocks in glycolysis in <italic>Saccharomyces cerevisiae<\/italic>.","volume":"139","author":"M
|
186
|
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Ciriacy","year":"1979","journal-title":"J Bacteriol"},{"key":"ref32","doi-asserted-by":"crossref","first-page":"332","DOI":"10.1016\/j.abb.2004.01.003","article-title":"Hypoxic
|
187
|
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up-regulation of triosephosphate isomerase expression in mouse brain capillary
|
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|
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endothelial cells.","volume":"423","author":"R Yamaji","year":"2004","journal-title":"Arch
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|
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|
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|
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isolation of yeast genomic DNA: Bust n' Grab.","volume":"4","author":"S
|
191
|
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Harju","year":"2004","journal-title":"BMC Biotechnol"},{"key":"ref34","doi-asserted-by":"crossref","first-page":"2893","DOI":"10.1093\/hmg\/ddi321","article-title":"Ataxin-2
|
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|
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and huntingtin interact with endophilin-A complexes to function in plastin-associated
|
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|
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pathways.","volume":"14","author":"M Ralser","year":"2005","journal-title":"Hum
|
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|
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|
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|
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role of respiration, reactive oxygen species and oxidative stress in mother
|
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|
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cell-specific ageing of yeast strains defective in the RAS signalling pathway.","volume":"5","author":"G
|
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|
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|
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|
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of a yeast two-hybrid strain suitable for competitive protein binding analysis.","volume":"39","author":"M
|
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|
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Ralser","year":"2005","journal-title":"Biotechniques"},{"key":"ref37","doi-asserted-by":"crossref","first-page":"475","DOI":"10.1016\/S0021-9258(18)62514-1","article-title":"A
|
200
|
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kinetic study of glycolytic enzyme synthesis in yeast.","volume":"246","author":"PK
|
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|
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Maitra","year":"1971","journal-title":"J Biol Chem"},{"key":"ref38","doi-asserted-by":"crossref","first-page":"346","DOI":"10.1107\/S1744309105008341","article-title":"Structure
|
202
|
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of a high-resolution crystal form of human triosephosphate isomerase: improvement
|
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|
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of crystals using the gel-tube method.","volume":"61","author":"T Kinoshita","year":"2005","journal-title":"Acta
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|
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|
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|
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perturbation of glycolysis results in inhibition of de novo inositol biosynthesis.","volume":"280","author":"Y
|
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|
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Shi","year":"2005","journal-title":"J Biol Chem"},{"key":"ref40","doi-asserted-by":"crossref","first-page":"3106","DOI":"10.1182\/blood.V98.10.3106","article-title":"Distinct
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|
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behavior of mutant triosephosphate isomerase in hemolysate and in isolated
|
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|
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form: molecular basis of enzyme deficiency.","volume":"98","author":"F Orosz","year":"2001","journal-title":"Blood"},{"key":"ref41","doi-asserted-by":"crossref","first-page":"442","DOI":"10.1007\/s00438-003-0941-0","article-title":"Interrelations
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|
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between the efficiency of translation start sites and other sequence features
|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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network prediction of translation initiation sites in eukaryotes: perspectives
|
218
|
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for EST and genome analysis.","volume":"5","author":"AG Pedersen","year":"1997","journal-title":"Proc
|
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|
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|
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|
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|
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|
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|
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|
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in the yeast two-hybrid system.","volume":"285","author":"IG Serebriiskii","year":"2000","journal-title":"Anal
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mother cells of <italic>Saccharomyces cerevisiae<\/italic> show markers of
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stress: a regulator of apoptosis in yeast.","volume":"145","author":"F Madeo","year":"1999","journal-title":"J
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isomerase deficiency: haemolytic anaemia, myopathy with altered mitochondria
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and mental retardation due to a new variant with accelerated enzyme catabolism
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and diminished specific activity.","volume":"150","author":"SW Eber","year":"1991","journal-title":"Eur
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codon for the methionine at position 129 (M129) in the human prion protein
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isomerase deficiency: consequences of an inherited mutation at mRNA, protein
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S-thiolation targets glycolysis and protein synthesis in response to oxidative
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Yap1 and Skn7.","volume":"33","author":"VM Costa","year":"2002","journal-title":"Free
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data/spec/metadata_spec.rb
CHANGED
@@ -11,14 +11,14 @@ describe Commonmeta::Metadata, vcr: true do
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11
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|
it 'unknown DOI prefix' do
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|
input = 'http://doi.org/10.0137/14802'
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subject = described_class.new(input: input)
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-
expect(subject.errors).to eq(['root is missing required keys: id, type, url,
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+
expect(subject.errors).to eq(['root is missing required keys: id, type, url, contributors, titles, publisher, date'])
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expect(subject.valid?).to be false
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end
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it 'DOI RA not Crossref or DataCite' do
|
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|
input = 'http://doi.org/10.3980/j.issn.2222-3959.2015.03.07'
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20
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|
subject = described_class.new(input: input)
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-
expect(subject.errors).to eq(['root is missing required keys: id, type, url,
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+
expect(subject.errors).to eq(['root is missing required keys: id, type, url, contributors, titles, publisher, date'])
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22
22
|
expect(subject.valid?).to be false
|
23
23
|
end
|
24
24
|
end
|
@@ -31,9 +31,9 @@ describe Commonmeta::Metadata, vcr: true do
|
|
31
31
|
expect(subject.id).to eq('https://doi.org/10.7554/elife.01567')
|
32
32
|
expect(subject.type).to eq('JournalArticle')
|
33
33
|
expect(subject.url).to eq('http://elifesciences.org/lookup/doi/10.7554/eLife.01567')
|
34
|
-
expect(subject.
|
35
|
-
expect(subject.
|
36
|
-
'type' => 'Person')
|
34
|
+
expect(subject.contributors.length).to eq(5)
|
35
|
+
expect(subject.contributors.first).to eq('familyName' => 'Sankar', 'givenName' => 'Martial',
|
36
|
+
'type' => 'Person', 'contributorRoles' => ['Author'])
|
37
37
|
expect(subject.titles).to eq([{ 'title' => 'Automated quantitative histology reveals vascular morphodynamics during Arabidopsis hypocotyl secondary growth' }])
|
38
38
|
expect(subject.descriptions.first['description']).to start_with('Among various advantages, their small size makes model organisms preferred subjects of investigation.')
|
39
39
|
expect(subject.license).to eq('id' => 'CC-BY-3.0', 'url' => 'https://creativecommons.org/licenses/by/3.0/legalcode')
|
@@ -48,8 +48,8 @@ describe Commonmeta::Metadata, vcr: true do
|
|
48
48
|
expect(subject.state).to eq('not_found')
|
49
49
|
expect(subject.id).to eq('https://doi.org/10.7554/elife.01567')
|
50
50
|
expect(subject.type).to eq('Dissertation')
|
51
|
-
expect(subject.
|
52
|
-
'type' => 'Person' }])
|
51
|
+
expect(subject.contributors).to eq([{ 'familyName' => 'Toparlar', 'givenName' => 'Y.',
|
52
|
+
'type' => 'Person', 'contributorRoles' => ['Author'] }])
|
53
53
|
expect(subject.titles).to eq([{ 'title' => 'A multiscale analysis of the urban heat island effect: from city averaged temperatures to the energy demand of individual buildings' }])
|
54
54
|
expect(subject.descriptions.first['description']).to start_with('Designing the climates of cities')
|
55
55
|
expect(subject.date).to eq('published' => '2018')
|