commonmeta-ruby 3.0.10 → 3.2.1
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- checksums.yaml +4 -4
- data/Gemfile.lock +37 -36
- data/bin/commonmeta +1 -1
- data/commonmeta.gemspec +1 -1
- data/lib/commonmeta/cli.rb +7 -0
- data/lib/commonmeta/metadata_utils.rb +2 -0
- data/lib/commonmeta/readers/json_feed_reader.rb +90 -0
- data/lib/commonmeta/utils.rb +23 -0
- data/lib/commonmeta/version.rb +1 -1
- data/spec/author_utils_spec.rb +10 -0
- data/spec/cli_spec.rb +8 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/json_feed/blog_post.yml +360 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed/citation_style_language.yml +360 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed/citation_style_language_blog.yml +360 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed/front-matter_blog.yml +1034 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed/upstream.yml +2438 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed/upstream_blog.yml +2438 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/blogger_post.yml +94 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/ghost_post_with_doi.yml +117 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/jekyll_post.yml +87 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_item_metadata/wordpress_post.yml +163 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_metadata/blogger_post.yml +141 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_metadata/ghost_post_with_doi.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_metadata/jekyll_post.yml +134 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_feed_metadata/wordpress_post.yml +210 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_item_metadata/blogger_post.yml +94 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_item_metadata/ghost_post.yml +117 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_item_metadata/ghost_post_with_doi.yml +117 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_item_metadata/jekyll_post.yml +170 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_item_metadata/wordpress_post.yml +163 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_post_metadata/blogger_post.yml +141 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_post_metadata/ghost_post_with_doi.yml +164 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_post_metadata/jekyll_post.yml +134 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_json_post_metadata/wordpress_post.yml +210 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_link/license.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/get_link/url.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/json_feed_url/front-matter_blog.yml +221 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_feed_item_from_rogue_scholar_with_doi.yml +163 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_feed_item_from_upstream_blog.yml +243 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_item_from_rogue_scholar_with_doi.yml +163 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_item_from_upstream_blog.yml +243 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_post_from_rogue_scholar_with_doi.yml +210 -0
- data/spec/fixtures/vcr_cassettes/Commonmeta_Metadata/write_metadata_as_crossref/json_post_from_upstream_blog.yml +290 -0
- data/spec/readers/json_feed_reader_spec.rb +110 -0
- data/spec/utils_spec.rb +338 -314
- data/spec/writers/crossref_xml_writer_spec.rb +183 -137
- metadata +39 -5
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA256:
|
3
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-
metadata.gz:
|
4
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-
data.tar.gz:
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3
|
+
metadata.gz: 6489e2d1d9225e98fbf809c51986da2d9959b25dadc51ab5637a8fa43181e743
|
4
|
+
data.tar.gz: 0b4d31c968f52baf74848fc51290123db1645503f55840172c01aacb43ec5753
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: c6224cacab63d37765875e6e23fe1c70b7443e603b895866d2b192fb5d823d7d98d8613eae03e56debf9fea1a02f7a13f45a4ed5b0d2f37990368a6fe18c8182
|
7
|
+
data.tar.gz: c07f1ff76a51a313a96a881077b1a3f5ee918a3cf7012c5edbdd8dce24381d856994b840b76563185fc220ac3f3c75c5edf4e06c6c69524ab48b526b63c1d5d8
|
data/Gemfile.lock
CHANGED
@@ -1,7 +1,7 @@
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PATH
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remote: .
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specs:
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commonmeta-ruby (3.
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commonmeta-ruby (3.2.1)
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activesupport (>= 4.2.5, < 8.0)
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addressable (~> 2.8.1, < 2.8.2)
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base32-url (>= 0.5.0, < 1)
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gender_detector (~> 2.0)
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http (~> 5.1, >= 5.1.1)
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json-ld-preloaded (~> 3.2, >= 3.2.2)
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json_schemer (~> 0.
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json_schemer (~> 1.0.1)
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jsonlint (~> 0.3.0)
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loofah (~> 2.19)
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namae (~> 1.0)
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GEM
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remote: https://rubygems.org/
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specs:
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activesupport (7.0.
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activesupport (7.0.5)
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concurrent-ruby (~> 1.0, >= 1.0.2)
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i18n (>= 1.6, < 2)
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minitest (>= 5.1)
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docile (1.4.0)
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domain_name (0.5.20190701)
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unf (>= 0.0.5, < 1.0.0)
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ebnf (2.3.
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ebnf (2.3.3)
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htmlentities (~> 4.3)
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rdf (~> 3.2)
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scanf (~> 1.0)
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sxp (~> 1.2)
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unicode-types (~> 1.8)
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ecma-re-validator (0.4.0)
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regexp_parser (~> 2.2)
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edtf (3.1.1)
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activesupport (>= 3.0, < 8.0)
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ffi (1.15.5)
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@@ -86,25 +84,24 @@ GEM
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http-cookie (1.0.5)
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domain_name (~> 0.5)
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http-form_data (2.3.0)
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i18n (1.
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i18n (1.14.0)
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concurrent-ruby (~> 1.0)
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json (2.6.3)
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json-canonicalization (0.3.
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json-ld (3.2.
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json-canonicalization (0.3.2)
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json-ld (3.2.5)
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htmlentities (~> 4.3)
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json-canonicalization (~> 0.3)
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json-canonicalization (~> 0.3, >= 0.3.2)
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link_header (~> 0.0, >= 0.0.8)
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multi_json (~> 1.15)
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rack (
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rdf (~> 3.2, >= 3.2.
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rack (>= 2.2, < 4)
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rdf (~> 3.2, >= 3.2.10)
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json-ld-preloaded (3.2.2)
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json-ld (~> 3.2)
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rdf (~> 3.2)
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json_schemer (0.
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ecma-re-validator (~> 0.3)
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json_schemer (1.0.1)
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hana (~> 1.3)
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regexp_parser (~> 2.0)
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simpleidn (~> 0.2)
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jsonlint (0.3.0)
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oj (~> 3)
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optimist (~> 3)
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llhttp-ffi (0.4.0)
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ffi-compiler (~> 1.0)
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rake (~> 13.0)
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loofah (2.
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+
loofah (2.21.3)
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crass (~> 1.0.2)
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nokogiri (>= 1.
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nokogiri (>= 1.12.0)
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matrix (0.4.2)
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minitest (5.18.0)
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multi_json (1.15.0)
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namae (1.1.1)
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nokogiri (1.
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nokogiri (1.15.2-arm64-darwin)
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racc (~> 1.4)
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oj (3.
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oj (3.15.0)
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optimist (3.0.1)
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parallel (1.
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parser (3.2.2.
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parallel (1.23.0)
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parser (3.2.2.1)
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ast (~> 2.4.1)
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postrank-uri (1.1)
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addressable (>= 2.4.0)
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@@ -133,12 +130,12 @@ GEM
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public_suffix (>= 4.0.0, < 5)
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public_suffix (4.0.7)
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racc (1.6.2)
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rack (
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rack (3.0.7)
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rack-test (2.1.0)
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rack (>= 1.3)
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rainbow (3.1.1)
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rake (13.0.6)
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rdf (3.2.
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rdf (3.2.10)
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link_header (~> 0.0, >= 0.0.8)
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rdf-aggregate-repo (3.2.1)
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rdf (~> 3.2)
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rdf-turtle (3.2.1)
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ebnf (~> 2.3)
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rdf (~> 3.2)
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rdf-vocab (3.2.
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rdf-vocab (3.2.6)
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rdf (~> 3.2, >= 3.2.4)
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rdf-xsd (3.2.1)
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rdf (~> 3.2)
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rexml (~> 3.2)
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regexp_parser (2.
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regexp_parser (2.8.0)
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rexml (3.2.5)
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rspec (3.12.0)
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rspec-core (3.12.2)
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rspec-expectations (3.12.
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rspec-expectations (3.12.3)
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diff-lcs (>= 1.2.0, < 2.0)
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rspec-mocks (3.12.5)
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rspec-xsd (0.1.0)
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rubocop (1.
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rubocop (1.52.0)
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parser (>= 3.2.0.0)
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rubocop-ast (>= 1.28.0, < 2.0)
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unicode-display_width (>= 2.4.0, < 3.0)
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rubocop-ast (1.
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rubocop-ast (1.29.0)
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parser (>= 3.2.1.0)
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rubocop-capybara (2.
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rubocop-performance (1.18.0)
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tilt (2.1.0)
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tzinfo (2.0.6)
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unf_ext (0.0.8.2)
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unicode-display_width (2.4.2)
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unicode-types (1.8.0)
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uri_template (0.7.0)
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vcr (6.1.0)
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data/bin/commonmeta
CHANGED
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require File.expand_path("../../lib/commonmeta", __FILE__)
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-
if (ARGV & %w(--version -v help --help encode decode encode_id decode_id)).empty?
|
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+
if (ARGV & %w(--version -v help --help encode decode encode_id decode_id json_feed)).empty?
|
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6
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Commonmeta::CLI.start(ARGV.dup.unshift("convert"))
|
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else
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Commonmeta::CLI.start
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data/commonmeta.gemspec
CHANGED
@@ -30,7 +30,7 @@ Gem::Specification.new do |s|
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s.add_dependency 'http', '~> 5.1', '>= 5.1.1'
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s.add_dependency 'json-ld-preloaded', '~> 3.2', '>= 3.2.2'
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s.add_dependency 'jsonlint', '~> 0.3.0'
|
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-
s.add_dependency 'json_schemer', '~> 0.
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+
s.add_dependency 'json_schemer', '~> 1.0.1'
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s.add_dependency 'loofah', '~> 2.19'
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s.add_dependency 'namae', '~> 1.0'
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s.add_dependency 'postrank-uri', '~> 1.1'
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data/lib/commonmeta/cli.rb
CHANGED
@@ -9,6 +9,7 @@ module Commonmeta
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9
9
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class CLI < Thor
|
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include Commonmeta::DoiUtils
|
11
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include Commonmeta::Utils
|
12
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+
include Commonmeta::Readers::JsonFeedReader
|
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def self.exit_on_failure?
|
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true
|
@@ -79,6 +80,12 @@ module Commonmeta
|
|
79
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puts decode_container_id(id)
|
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end
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+
desc '', 'feed'
|
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+
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+
def json_feed(id)
|
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+
puts get_json_feed(id)
|
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+
end
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+
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default_task :convert
|
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end
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end
|
@@ -13,6 +13,7 @@ require_relative 'readers/codemeta_reader'
|
|
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require_relative 'readers/crossref_reader'
|
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require_relative 'readers/crossref_xml_reader'
|
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require_relative 'readers/datacite_reader'
|
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+
require_relative 'readers/json_feed_reader'
|
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require_relative 'readers/npm_reader'
|
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require_relative 'readers/ris_reader'
|
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require_relative 'readers/schema_org_reader'
|
@@ -46,6 +47,7 @@ module Commonmeta
|
|
46
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include Commonmeta::Readers::CrossrefXmlReader
|
47
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include Commonmeta::Readers::CslReader
|
48
49
|
include Commonmeta::Readers::DataciteReader
|
50
|
+
include Commonmeta::Readers::JsonFeedReader
|
49
51
|
include Commonmeta::Readers::NpmReader
|
50
52
|
include Commonmeta::Readers::RisReader
|
51
53
|
include Commonmeta::Readers::SchemaOrgReader
|
@@ -0,0 +1,90 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
module Commonmeta
|
4
|
+
module Readers
|
5
|
+
module JsonFeedReader
|
6
|
+
def get_json_feed_item(id: nil, **_options)
|
7
|
+
return { "string" => nil, "state" => "not_found" } unless id.present?
|
8
|
+
|
9
|
+
url = normalize_id(id)
|
10
|
+
response = HTTP.get(url)
|
11
|
+
return { "string" => nil, "state" => "not_found" } unless response.status.success?
|
12
|
+
|
13
|
+
{ "string" => response.body.to_s }
|
14
|
+
end
|
15
|
+
|
16
|
+
def read_json_feed_item(string: nil, **options)
|
17
|
+
read_options = ActiveSupport::HashWithIndifferentAccess.new(options.except(:doi, :id, :url,
|
18
|
+
:sandbox, :validate, :ra))
|
19
|
+
|
20
|
+
meta = string.present? ? JSON.parse(string) : {}
|
21
|
+
|
22
|
+
id = options[:doi] ? normalize_doi(options[:doi]) : normalize_id(meta.fetch("id", nil))
|
23
|
+
url = normalize_url(meta.fetch("url", nil))
|
24
|
+
type = "Article"
|
25
|
+
creators = if meta.fetch("authors", nil).present?
|
26
|
+
get_authors(from_json_feed(Array.wrap(meta.fetch("authors"))))
|
27
|
+
else
|
28
|
+
[{ "type" => "Organization", "name" => ":(unav)" }]
|
29
|
+
end
|
30
|
+
titles = [{ "title" => meta.fetch("title", nil) }]
|
31
|
+
publisher = { "name" => meta.dig("blog", "title") }
|
32
|
+
|
33
|
+
date = {}
|
34
|
+
date["published"] = get_iso8601_date(meta.dig("date_published")) if meta.dig("date_published").present?
|
35
|
+
date["updated"] = get_iso8601_date(meta.dig("date_modified")) if meta.dig("date_modified").present?
|
36
|
+
|
37
|
+
license = if meta.dig("blog", "license").present?
|
38
|
+
hsh_to_spdx("rightsURI" => meta.dig("blog", "license"))
|
39
|
+
end
|
40
|
+
home_page_url = normalize_url(meta.dig("blog", "home_page_url"))
|
41
|
+
container = if meta.dig("blog", "title").present?
|
42
|
+
{ "type" => "Periodical",
|
43
|
+
"title" => meta.dig("blog", "title"),
|
44
|
+
"identifier" => home_page_url,
|
45
|
+
"identifierType" => "URL" }
|
46
|
+
end
|
47
|
+
|
48
|
+
descriptions = if meta.fetch("summary", nil).present?
|
49
|
+
[{ "description" => sanitize(meta.fetch("summary", nil)),
|
50
|
+
"descriptionType" => "Abstract" }]
|
51
|
+
else
|
52
|
+
[]
|
53
|
+
end
|
54
|
+
language = meta.fetch("language", nil) || meta.fetch("blog", "language", nil)
|
55
|
+
state = id.present? || read_options.present? ? "findable" : "not_found"
|
56
|
+
subjects = Array.wrap(meta.fetch("tags", nil)).reduce([]) do |sum, subject|
|
57
|
+
sum += name_to_fos(subject)
|
58
|
+
|
59
|
+
sum
|
60
|
+
end
|
61
|
+
|
62
|
+
{ "id" => id,
|
63
|
+
"type" => type,
|
64
|
+
"url" => url,
|
65
|
+
"titles" => titles,
|
66
|
+
"creators" => creators,
|
67
|
+
"publisher" => publisher,
|
68
|
+
"container" => container,
|
69
|
+
"date" => date,
|
70
|
+
"language" => language,
|
71
|
+
"descriptions" => descriptions,
|
72
|
+
"license" => license,
|
73
|
+
"subjects" => subjects.presence,
|
74
|
+
"state" => state }.compact.merge(read_options)
|
75
|
+
end
|
76
|
+
|
77
|
+
def get_json_feed(id)
|
78
|
+
# get JSON Feed items not registered as DOIs
|
79
|
+
return { "string" => nil, "state" => "not_found" } unless id.present?
|
80
|
+
|
81
|
+
url = json_feed_url(id)
|
82
|
+
response = HTTP.get(url)
|
83
|
+
return { "string" => nil, "state" => "not_found" } unless response.status.success?
|
84
|
+
|
85
|
+
blog = JSON.parse(response.body.to_s)
|
86
|
+
blog["items"].select { |item| !validate_doi(item["id"]) }.map { |item| item["short_id"] }.join(",").presence
|
87
|
+
end
|
88
|
+
end
|
89
|
+
end
|
90
|
+
end
|
data/lib/commonmeta/utils.rb
CHANGED
@@ -468,6 +468,8 @@ module Commonmeta
|
|
468
468
|
"cff"
|
469
469
|
elsif %r{\A(http|https):/(/)?github\.com/(.+)\z}.match?(id)
|
470
470
|
"cff"
|
471
|
+
elsif %r{\A(http|https):/(/)?rogue-scholar\.org/api/posts/(.+)\z}.match?(id)
|
472
|
+
"json_feed_item"
|
471
473
|
else
|
472
474
|
"schema_org"
|
473
475
|
end
|
@@ -875,6 +877,12 @@ module Commonmeta
|
|
875
877
|
}
|
876
878
|
end
|
877
879
|
|
880
|
+
def from_json_feed(element)
|
881
|
+
mapping = { "url" => "id" }
|
882
|
+
|
883
|
+
map_hash_keys(element: element, mapping: mapping)
|
884
|
+
end
|
885
|
+
|
878
886
|
def from_csl(element)
|
879
887
|
Array.wrap(element).map do |a|
|
880
888
|
if a["literal"].present?
|
@@ -1068,6 +1076,8 @@ module Commonmeta
|
|
1068
1076
|
|
1069
1077
|
return iso8601_time.split(".").first + "Z" if iso8601_time.to_s.include? "."
|
1070
1078
|
|
1079
|
+
return iso8601_time.split("+").first + "Z" if iso8601_time.to_s.include? "+"
|
1080
|
+
|
1071
1081
|
iso8601_time
|
1072
1082
|
end
|
1073
1083
|
|
@@ -1084,6 +1094,15 @@ module Commonmeta
|
|
1084
1094
|
dd.fetch("date", nil)
|
1085
1095
|
end
|
1086
1096
|
|
1097
|
+
def get_link(links, link_type)
|
1098
|
+
ll = Array.wrap(links).find { |d| d["rel"] == link_type } || {}
|
1099
|
+
ll.fetch("href", nil)
|
1100
|
+
end
|
1101
|
+
|
1102
|
+
def rogue_scholar_api_url(id, _options = {})
|
1103
|
+
"https://rogue-scholar.org/api/posts/#{id}"
|
1104
|
+
end
|
1105
|
+
|
1087
1106
|
# convert commonmeta dates to DataCite format
|
1088
1107
|
def get_dates_from_date(date)
|
1089
1108
|
return nil if date.nil?
|
@@ -1361,5 +1380,9 @@ module Commonmeta
|
|
1361
1380
|
def decode_container_id(id)
|
1362
1381
|
Base32::URL.decode(id)
|
1363
1382
|
end
|
1383
|
+
|
1384
|
+
def json_feed_url(id)
|
1385
|
+
"https://rogue-scholar.org/api/blogs/#{id}"
|
1386
|
+
end
|
1364
1387
|
end
|
1365
1388
|
end
|
data/lib/commonmeta/version.rb
CHANGED
data/spec/author_utils_spec.rb
CHANGED
@@ -40,6 +40,16 @@ describe Commonmeta::Metadata, vcr: true do
|
|
40
40
|
expect(subject.is_personal_name?(name: author['name'])).to be true
|
41
41
|
end
|
42
42
|
|
43
|
+
it 'has unknown given name' do
|
44
|
+
author = { 'name' => 'Rintze Zelle' }
|
45
|
+
expect(subject.is_personal_name?(name: author['name'])).to be false
|
46
|
+
end
|
47
|
+
|
48
|
+
it 'has middle initial' do
|
49
|
+
author = { 'name' => 'Martin H. Fenner' }
|
50
|
+
expect(subject.is_personal_name?(name: author['name'])).to be true
|
51
|
+
end
|
52
|
+
|
43
53
|
it 'has no info' do
|
44
54
|
author = { 'name' => 'M Fenner' }
|
45
55
|
expect(subject.is_personal_name?(name: author['name'])).to be false
|
data/spec/cli_spec.rb
CHANGED
@@ -340,4 +340,12 @@ describe Commonmeta::CLI do
|
|
340
340
|
expect { subject.decode_id input }.to output(/18397685862\n/).to_stdout
|
341
341
|
end
|
342
342
|
end
|
343
|
+
|
344
|
+
describe "json_feed", vcr: true do
|
345
|
+
let(:input) { "prmb582" }
|
346
|
+
|
347
|
+
it "blog post" do
|
348
|
+
expect { subject.json_feed input }.to output(/1jdkoe52,4qe9ypg1,1jdkwod5,56glp9d9,1xdnk0d0,56glmmd9,1xdnoje0,31epl0dn,q0dqm6go\n/).to_stdout
|
349
|
+
end
|
350
|
+
end
|
343
351
|
end
|