clusto 0.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- data/LICENSE +20 -0
- data/README.md +16 -0
- data/clusto.gemspec +9 -0
- data/lib/clusto.rb +81 -0
- data/lib/clusto/cluster.rb +28 -0
- data/lib/clusto/distance.rb +19 -0
- data/lib/clusto/point.rb +15 -0
- metadata +51 -0
data/LICENSE
ADDED
@@ -0,0 +1,20 @@
|
|
1
|
+
Copyright (c) 2012 Conor Mulligan, Solas.ca
|
2
|
+
|
3
|
+
Permission is hereby granted, free of charge, to any person obtaining
|
4
|
+
a copy of this software and associated documentation files (the
|
5
|
+
"Software"), to deal in the Software without restriction, including
|
6
|
+
without limitation the rights to use, copy, modify, merge, publish,
|
7
|
+
distribute, sublicense, and/or sell copies of the Software, and to
|
8
|
+
permit persons to whom the Software is furnished to do so, subject to
|
9
|
+
the following conditions:
|
10
|
+
|
11
|
+
The above copyright notice and this permission notice shall be
|
12
|
+
included in all copies or substantial portions of the Software.
|
13
|
+
|
14
|
+
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
|
15
|
+
EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
|
16
|
+
MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
|
17
|
+
NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
|
18
|
+
LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
|
19
|
+
OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
|
20
|
+
WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
|
data/README.md
ADDED
@@ -0,0 +1,16 @@
|
|
1
|
+
Clusto
|
2
|
+
======
|
3
|
+
|
4
|
+
*Simple Ruby point clustering*
|
5
|
+
|
6
|
+
If you're familiar with the [k-means][1] algorithm then Clusto's clustering process will probably be broadly recognisable, although it does take some liberties in the name of performance.
|
7
|
+
|
8
|
+
Usage
|
9
|
+
-----
|
10
|
+
|
11
|
+
```ruby
|
12
|
+
points = data.map { |p| Clusto::Point.new(p.x, p.y) }
|
13
|
+
clusters = Clusto.cluster(points)
|
14
|
+
```
|
15
|
+
|
16
|
+
[1]: http://en.wikipedia.org/wiki/K-means_clustering
|
data/clusto.gemspec
ADDED
data/lib/clusto.rb
ADDED
@@ -0,0 +1,81 @@
|
|
1
|
+
require 'clusto/point'
|
2
|
+
require 'clusto/cluster'
|
3
|
+
require 'clusto/distance'
|
4
|
+
|
5
|
+
module Clusto
|
6
|
+
extend self
|
7
|
+
|
8
|
+
INFINITY = +1.0/0
|
9
|
+
RADIANS_PER_DEGREES = Math::PI / 180
|
10
|
+
GREAT_CIRCLE_RADIUS = 6371
|
11
|
+
|
12
|
+
GRID_SIZE = 8
|
13
|
+
|
14
|
+
def minimum_bounding_rectangle(points)
|
15
|
+
xs = points.collect { |p| p.x }.minmax
|
16
|
+
ys = points.collect { |p| p.y }.minmax
|
17
|
+
|
18
|
+
[xs[0], ys[0], xs[1], ys[1]]
|
19
|
+
end
|
20
|
+
|
21
|
+
def cluster(points, options={})
|
22
|
+
bounds = options[:bounds] || Clusto.minimum_bounding_rectangle(points)
|
23
|
+
distance_method = options[:distance_method] || :haversine
|
24
|
+
|
25
|
+
# Create clusters
|
26
|
+
|
27
|
+
clusters = []
|
28
|
+
|
29
|
+
x = bounds[0]
|
30
|
+
y = bounds[3]
|
31
|
+
w = bounds[2] - bounds[0]
|
32
|
+
h = bounds[3] - bounds[1]
|
33
|
+
grid_w = w / GRID_SIZE
|
34
|
+
grid_h = h / GRID_SIZE
|
35
|
+
|
36
|
+
column = 0
|
37
|
+
row = 0
|
38
|
+
|
39
|
+
(GRID_SIZE ** 2).times do |i|
|
40
|
+
offset_x = x + (column * grid_w)
|
41
|
+
offset_y = y - (row * grid_h)
|
42
|
+
|
43
|
+
center = Clusto::Point.new(offset_x + (grid_w / 2), offset_y - (grid_h / 2))
|
44
|
+
clusters.push(Clusto::Cluster.new(center))
|
45
|
+
|
46
|
+
column = column+1
|
47
|
+
if column == GRID_SIZE
|
48
|
+
column = 0
|
49
|
+
row = row+1
|
50
|
+
end
|
51
|
+
end
|
52
|
+
|
53
|
+
# Assign points to clusters
|
54
|
+
|
55
|
+
points.each do |point|
|
56
|
+
distance = INFINITY
|
57
|
+
nearest = nil
|
58
|
+
|
59
|
+
clusters.each do |cluster|
|
60
|
+
begin
|
61
|
+
d = Clusto::Distance.send(distance_method, cluster.location, point)
|
62
|
+
rescue NoMethodError
|
63
|
+
raise "Unknown distance method '#{distance_method}."
|
64
|
+
end
|
65
|
+
|
66
|
+
if d < distance
|
67
|
+
distance = d
|
68
|
+
nearest = cluster
|
69
|
+
end
|
70
|
+
end
|
71
|
+
|
72
|
+
nearest.points.push(point)
|
73
|
+
end
|
74
|
+
|
75
|
+
# Reposition clusters
|
76
|
+
|
77
|
+
clusters.each do |cluster|
|
78
|
+
cluster.reposition
|
79
|
+
end
|
80
|
+
end
|
81
|
+
end
|
@@ -0,0 +1,28 @@
|
|
1
|
+
module Clusto
|
2
|
+
class Cluster
|
3
|
+
attr_accessor :location, :points
|
4
|
+
|
5
|
+
def initialize(location)
|
6
|
+
@location = location
|
7
|
+
@points = []
|
8
|
+
end
|
9
|
+
|
10
|
+
def reposition
|
11
|
+
return if @points.empty?
|
12
|
+
|
13
|
+
x = 0
|
14
|
+
y = 0
|
15
|
+
center = @location
|
16
|
+
|
17
|
+
@points.each do |point|
|
18
|
+
x += point.x
|
19
|
+
y += point.y
|
20
|
+
end
|
21
|
+
|
22
|
+
x /= points.length
|
23
|
+
y /= points.length
|
24
|
+
|
25
|
+
@location = Clusto::Point.new(x, y)
|
26
|
+
end
|
27
|
+
end
|
28
|
+
end
|
@@ -0,0 +1,19 @@
|
|
1
|
+
module Clusto
|
2
|
+
class Distance
|
3
|
+
def self.euclidian(pa, pb)
|
4
|
+
Math::sqrt((pa.x - pb.x) ** 2 + (pa.y - pb.y) ** 2)
|
5
|
+
end
|
6
|
+
|
7
|
+
def self.haversine(pa, pb)
|
8
|
+
x = (pb.x - pa.x) * RADIANS_PER_DEGREES
|
9
|
+
y = (pb.y - pa.y) * RADIANS_PER_DEGREES
|
10
|
+
|
11
|
+
ar = pa.x * RADIANS_PER_DEGREES
|
12
|
+
br = pb.x * RADIANS_PER_DEGREES
|
13
|
+
|
14
|
+
a = Math.sin(x / 2) ** 2 + Math.cos(ar) * Math.cos(br) * Math.sin(y / 2) ** 2
|
15
|
+
c = 2 * Math.atan2(Math::sqrt(a), Math::sqrt(1 - a))
|
16
|
+
GREAT_CIRCLE_RADIUS * c;
|
17
|
+
end
|
18
|
+
end
|
19
|
+
end
|
data/lib/clusto/point.rb
ADDED
metadata
ADDED
@@ -0,0 +1,51 @@
|
|
1
|
+
--- !ruby/object:Gem::Specification
|
2
|
+
name: clusto
|
3
|
+
version: !ruby/object:Gem::Version
|
4
|
+
version: 0.1.0
|
5
|
+
prerelease:
|
6
|
+
platform: ruby
|
7
|
+
authors:
|
8
|
+
- Conor Mulligan
|
9
|
+
autorequire:
|
10
|
+
bindir: bin
|
11
|
+
cert_chain: []
|
12
|
+
date: 2012-10-13 00:00:00.000000000 Z
|
13
|
+
dependencies: []
|
14
|
+
description:
|
15
|
+
email: conmulligan@gmail.com
|
16
|
+
executables: []
|
17
|
+
extensions: []
|
18
|
+
extra_rdoc_files: []
|
19
|
+
files:
|
20
|
+
- ./clusto.gemspec
|
21
|
+
- ./lib/clusto/cluster.rb
|
22
|
+
- ./lib/clusto/distance.rb
|
23
|
+
- ./lib/clusto/point.rb
|
24
|
+
- ./lib/clusto.rb
|
25
|
+
- ./LICENSE
|
26
|
+
- ./README.md
|
27
|
+
homepage:
|
28
|
+
licenses: []
|
29
|
+
post_install_message:
|
30
|
+
rdoc_options: []
|
31
|
+
require_paths:
|
32
|
+
- lib
|
33
|
+
required_ruby_version: !ruby/object:Gem::Requirement
|
34
|
+
none: false
|
35
|
+
requirements:
|
36
|
+
- - ! '>='
|
37
|
+
- !ruby/object:Gem::Version
|
38
|
+
version: '0'
|
39
|
+
required_rubygems_version: !ruby/object:Gem::Requirement
|
40
|
+
none: false
|
41
|
+
requirements:
|
42
|
+
- - ! '>='
|
43
|
+
- !ruby/object:Gem::Version
|
44
|
+
version: '0'
|
45
|
+
requirements: []
|
46
|
+
rubyforge_project:
|
47
|
+
rubygems_version: 1.8.15
|
48
|
+
signing_key:
|
49
|
+
specification_version: 3
|
50
|
+
summary: Simple Ruby point clustering
|
51
|
+
test_files: []
|