clusterkit 0.2.6 → 0.3.1.pre.1

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
-  metadata.gz: 82e58cc0e1f7e5b5d918b67b015ca766f43c7977bce8675cccc55db718d6b9f0
-  data.tar.gz: 5461afea288ab1801b77f04dc0b360c2c6a70665d533ce81d433207f8aadd2e3
+  metadata.gz: 912a056ca7672bd2817381a5ad88d0c1e30db9d6b12be545f36b42abc6d725eb
+  data.tar.gz: 12cc9f11080f4621f316fbf76a707df0808b50e18dff06117938de029db7c042
 SHA512:
-  metadata.gz: 934c99e049dc701134d666d172fbbd9fa7807c4be1f84bb2116167633e3f0f12f1a409f05ea5d847c3e06fe6d6a0c7281c5a91852454d4be599001c4f09284a7
-  data.tar.gz: 3cc3420b3a73b5e4df364f9a67fe39b1f4ee20545ca3a86776d5be9a47d19fcdcc43e4ed32cf9216c727723bd9f8a23c54719df25f01ea38cfcb5cf0b354406c
+  metadata.gz: 9db521f6cc552ca876f9e90f76e1c3bc8399a1e3ba21d0460f5b3a4a8dde7007b433d259a4b76319b671f66f8937993e104a1876a4e04580838a46a793d7fc97
+  data.tar.gz: f0b05b6c11792f583040acd038969be71adc56685c6aa181845bfe16b0fdd94cf3596aa4812e162748f535570326f1b5450aab25a40a5ae26761cdf5052e87b6

data/Cargo.lock

@@ -247,16 +247,14 @@ dependencies = [
 
 [[package]]
 name = "bindgen"
-version = "0.69.5"
+version = "0.72.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "271383c67ccabffb7381723dea0672a673f292304fcb45c01cc648c7a8d58088"
+checksum = "993776b509cfb49c750f11b8f07a46fa23e0a1386ffc01fb1e7d343efc387895"
 dependencies = [
  "bitflags 2.9.2",
  "cexpr",
  "clang-sys",
  "itertools",
- "lazy_static",
- "lazycell",
  "proc-macro2",
  "quote",
  "regex",
@@ -1304,12 +1302,6 @@ version = "1.5.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "bbd2bcb4c963f2ddae06a2efc7e9f3591312473c50c6685e1f298068316e66fe"
 
-[[package]]
-name = "lazycell"
-version = "1.3.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "830d08ce1d1d941e6b30645f1a0eb5643013d835ce3779a5fc208261dbe10f55"
-
 [[package]]
 name = "libc"
 version = "0.2.175"
@@ -1323,7 +1315,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "07033963ba89ebaf1584d767badaa2e8fcec21aedea6b8c0346d487d49c28667"
 dependencies = [
  "cfg-if",
- "windows-targets 0.48.5",
+ "windows-targets 0.52.6",
 ]
 
 [[package]]
@@ -1970,18 +1962,18 @@ dependencies = [
 
 [[package]]
 name = "rb-sys"
-version = "0.9.124"
+version = "0.9.128"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c85c4188462601e2aa1469def389c17228566f82ea72f137ed096f21591bc489"
+checksum = "45ca28513560e56cfb79a62b1fce363c73af170a182024ce880c77ee9429920a"
 dependencies = [
  "rb-sys-build",
 ]
 
 [[package]]
 name = "rb-sys-build"
-version = "0.9.124"
+version = "0.9.128"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "568068db4102230882e6d4ae8de6632e224ca75fe5970f6e026a04e91ed635d3"
+checksum = "ce04b2c55eff3a21aaa623fcc655d94373238e72cac6b3e1a3641ff31649f99a"
 dependencies = [
  "bindgen",
  "lazy_static",
@@ -2074,9 +2066,9 @@ dependencies = [
 
 [[package]]
 name = "rustc-hash"
-version = "1.1.0"
+version = "2.1.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "08d43f7aa6b08d49f382cde6a7982047c3426db949b1424bc4b7ec9ae12c6ce2"
+checksum = "94300abf3f1ae2e2b8ffb7b58043de3d399c73fa6f4b73826402a5c457614dbe"
 
 [[package]]
 name = "rustix"

data/Rakefile

@@ -1,17 +1,31 @@
 require "bundler/gem_tasks"
 require "rake/extensiontask"
-require "rspec/core/rake_task"
 
-# RSpec test task
-RSpec::Core::RakeTask.new(:spec)
+# rspec is a DEVELOPMENT-only dependency. The cross-compile build container
+# (rb-sys-dock, via scientist-labs/rust-gem-release) installs the runtime bundle
+# only, so this require would raise LoadError and abort `rake` before the native
+# build task can run. Guard it so this Rakefile always loads; the spec task simply
+# isn't available in a build-only environment.
+begin
+  require "rspec/core/rake_task"
+  RSpec::Core::RakeTask.new(:spec)
+rescue LoadError
+  desc "run specs (rspec unavailable in this environment)"
+  task(:spec) { abort "rspec is a development dependency and is not installed here" }
+end
 
-# Define the Rust extension
-spec = Gem::Specification.load("clusterkit.gemspec")
-Rake::ExtensionTask.new("clusterkit", spec) do |ext|
+# Define the Rust extension. Passing the loaded gemspec to ExtensionTask makes
+# rake-compiler expose the `native:<platform>` tasks rb-sys-dock invokes for each
+# precompiled leg; without it the cross build fails with "Don't know how to build task".
+GEMSPEC = Gem::Specification.load("clusterkit.gemspec")
+Rake::ExtensionTask.new("clusterkit", GEMSPEC) do |ext|
   ext.lib_dir = "lib/clusterkit"
   ext.source_pattern = "*.{rs,toml}"
   ext.cross_compile = true
-  ext.cross_platform = %w[x86-mingw32 x64-mingw32 x86-linux x86_64-linux x86_64-darwin arm64-darwin]
+  # Union of the precompiled targets this gem ships: both glibc linux arches
+  # (assembled by oxidize-rb cross-gem in rb-sys-dock) plus Apple Silicon
+  # (built natively on a macOS runner).
+  ext.cross_platform = %w[x86_64-linux aarch64-linux arm64-darwin]
 end
 
 task default: [:compile, :spec]

data/ext/clusterkit/Cargo.toml

@@ -7,8 +7,7 @@ edition = "2021"
 crate-type = ["cdylib"]
 
 [dependencies]
-magnus = { version = "0.8", features = ["embed"] }
-annembed = { git = "https://github.com/scientist-labs/annembed", tag = "clusterkit-0.2.6" }
+magnus = "0.8"annembed = { git = "https://github.com/scientist-labs/annembed", tag = "clusterkit-0.2.6" }
 hnsw_rs = { git = "https://github.com/scientist-labs/hnswlib-rs", tag = "clusterkit-0.1.0" }
 hdbscan = "0.11"
 ndarray = "0.16"

data/ext/clusterkit/extconf.rb

@@ -3,10 +3,21 @@ require "rb_sys/mkmf"
 
 create_rust_makefile("clusterkit/clusterkit") do |r|
   if ENV["CLUSTERKIT_FEATURES"]
+    # Explicit override wins (set CLUSTERKIT_FEATURES=openblas-static,... to force a backend).
     r.extra_cargo_args += ["--no-default-features"]
     r.features = ENV["CLUSTERKIT_FEATURES"].split(",")
   elsif RUBY_PLATFORM =~ /darwin/
+    # macOS links the system Accelerate framework — no OpenBLAS build needed.
     r.extra_cargo_args += ["--no-default-features"]
     r.features = ["macos-accelerate"]
+  elsif RUBY_PLATFORM =~ /linux/
+    # Linux: link the SYSTEM OpenBLAS/LAPACK (apt: libopenblas-dev liblapack-dev
+    # gfortran, provided by the rust-gem-cross image) instead of the default
+    # `openblas-static` feature, which compiles OpenBLAS from C+Fortran source.
+    # rb-sys-dock does NOT forward host env to extconf and a .cargo/config.toml
+    # [env] only reaches cargo-spawned procs (not mkmf), so this backend choice
+    # must live in committed code — it cannot be passed via a workflow input.
+    r.extra_cargo_args += ["--no-default-features"]
+    r.features = ["openblas-system"]
   end
 end

data/lib/clusterkit/clusterkit.rb

@@ -1,9 +1,14 @@
 # frozen_string_literal: true
 
+# Load the compiled Rust extension. Precompiled (platform) gems install it into a
+# Ruby-ABI-versioned subdir (lib/clusterkit/<major.minor>/clusterkit.{so,bundle}) so a
+# single fat gem can carry a binary per Ruby version; source/dev builds place it flat at
+# lib/clusterkit/clusterkit.{so,bundle}. Try the versioned path first, fall back to the
+# flat one. Resolution goes through $LOAD_PATH (`require`, never `require_relative`)
+# because RubyGems installs native extensions outside the gem's lib/ dir.
 begin
-  # Try to load the compiled extension
-  require_relative "clusterkit.bundle"
+  RUBY_VERSION =~ /(\d+\.\d+)/
+  require "clusterkit/#{Regexp.last_match(1)}/clusterkit"
 rescue LoadError
-  # If that fails, try the .so extension (Linux)
-  require_relative "clusterkit.so"
-end
+  require "clusterkit/clusterkit"
+end

data/lib/clusterkit/version.rb

@@ -1,5 +1,5 @@
 # frozen_string_literal: true
 
 module ClusterKit
-  VERSION = "0.2.6"
+  VERSION = "0.3.1.pre.1"
 end

data/lib/clusterkit.rb

@@ -1,7 +1,20 @@
 # frozen_string_literal: true
 
 require_relative "clusterkit/version"
-require "clusterkit/clusterkit"
+
+# Load the native extension. Precompiled platform gems install one .so/.bundle per
+# Ruby ABI under lib/clusterkit/<major.minor>/, while a source build (and the native
+# darwin gem) produce the flat lib/clusterkit/clusterkit.{so,bundle}. Try the
+# versioned path first, then fall back to flat. Use `require` (not
+# `require_relative`) so RubyGems can resolve the extension through $LOAD_PATH when
+# it installs native artifacts outside lib/.
+begin
+  RUBY_VERSION =~ /(\d+\.\d+)/
+  require "clusterkit/#{Regexp.last_match(1)}/clusterkit"
+rescue LoadError
+  require "clusterkit/clusterkit"
+end
+
 require_relative "clusterkit/configuration"
 
 # Main module for ClusterKit gem

metadata

@@ -1,14 +1,13 @@
 --- !ruby/object:Gem::Specification
 name: clusterkit
 version: !ruby/object:Gem::Version
-  version: 0.2.6
+  version: 0.3.1.pre.1
 platform: ruby
 authors:
 - Chris Petersen
-autorequire:
 bindir: exe
 cert_chain: []
-date: 2026-03-26 00:00:00.000000000 Z
+date: 1980-01-02 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rb_sys
@@ -192,7 +191,6 @@ metadata:
   homepage_uri: https://github.com/scientist-labs/clusterkit
   source_code_uri: https://github.com/scientist-labs/clusterkit
   changelog_uri: https://github.com/scientist-labs/clusterkit/blob/main/CHANGELOG.md
-post_install_message:
 rdoc_options: []
 require_paths:
 - lib
@@ -207,8 +205,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
     - !ruby/object:Gem::Version
       version: '0'
 requirements: []
-rubygems_version: 3.5.22
-signing_key:
+rubygems_version: 3.6.9
 specification_version: 4
 summary: High-performance clustering and dimensionality reduction for Ruby
 test_files: []