clustering 0.0.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- data/.gitignore +40 -0
- data/Gemfile +13 -0
- data/Gemfile.lock +30 -0
- data/LICENSE.txt +22 -0
- data/README.md +29 -0
- data/Rakefile +10 -0
- data/clustering.gemspec +19 -0
- data/lib/clustering/simple.rb +57 -0
- data/lib/clustering/version.rb +3 -0
- data/lib/clustering.rb +5 -0
- data/spec/lib/clustering/simple_spec.rb +31 -0
- data/spec/spec_helper.rb +17 -0
- metadata +65 -0
data/.gitignore
ADDED
@@ -0,0 +1,40 @@
|
|
1
|
+
/.bundle
|
2
|
+
db/*.sqlite3
|
3
|
+
/log
|
4
|
+
/tmp/**/*
|
5
|
+
.DS_Store
|
6
|
+
rerun.txt
|
7
|
+
.project
|
8
|
+
nbproject
|
9
|
+
test/ruby
|
10
|
+
/.idea
|
11
|
+
/.rvmrc
|
12
|
+
/.powrc
|
13
|
+
/coverage
|
14
|
+
/coverage.data
|
15
|
+
/public/assets
|
16
|
+
vendor/cache
|
17
|
+
vendor/bundle
|
18
|
+
.sass-cache
|
19
|
+
tmp/*
|
20
|
+
!tmp/
|
21
|
+
!tmp/restart.txt
|
22
|
+
!tmp/.gitkeep
|
23
|
+
|
24
|
+
*.gem
|
25
|
+
*.rbc
|
26
|
+
.bundle
|
27
|
+
.config
|
28
|
+
.yardoc
|
29
|
+
Gemfile.lock
|
30
|
+
InstalledFiles
|
31
|
+
_yardoc
|
32
|
+
coverage
|
33
|
+
doc/
|
34
|
+
lib/bundler/man
|
35
|
+
pkg
|
36
|
+
rdoc
|
37
|
+
spec/reports
|
38
|
+
test/tmp
|
39
|
+
test/version_tmp
|
40
|
+
tmp
|
data/Gemfile
ADDED
data/Gemfile.lock
ADDED
@@ -0,0 +1,30 @@
|
|
1
|
+
PATH
|
2
|
+
remote: .
|
3
|
+
specs:
|
4
|
+
clustering (0.0.1)
|
5
|
+
|
6
|
+
GEM
|
7
|
+
remote: https://rubygems.org/
|
8
|
+
specs:
|
9
|
+
diff-lcs (1.1.3)
|
10
|
+
metaclass (0.0.1)
|
11
|
+
mocha (0.12.4)
|
12
|
+
metaclass (~> 0.0.1)
|
13
|
+
rake (10.0.2)
|
14
|
+
rspec (2.11.0)
|
15
|
+
rspec-core (~> 2.11.0)
|
16
|
+
rspec-expectations (~> 2.11.0)
|
17
|
+
rspec-mocks (~> 2.11.0)
|
18
|
+
rspec-core (2.11.1)
|
19
|
+
rspec-expectations (2.11.3)
|
20
|
+
diff-lcs (~> 1.1.3)
|
21
|
+
rspec-mocks (2.11.2)
|
22
|
+
|
23
|
+
PLATFORMS
|
24
|
+
ruby
|
25
|
+
|
26
|
+
DEPENDENCIES
|
27
|
+
clustering!
|
28
|
+
mocha
|
29
|
+
rake (= 10.0.2)
|
30
|
+
rspec
|
data/LICENSE.txt
ADDED
@@ -0,0 +1,22 @@
|
|
1
|
+
Copyright (c) 2012 the-architect
|
2
|
+
|
3
|
+
MIT License
|
4
|
+
|
5
|
+
Permission is hereby granted, free of charge, to any person obtaining
|
6
|
+
a copy of this software and associated documentation files (the
|
7
|
+
"Software"), to deal in the Software without restriction, including
|
8
|
+
without limitation the rights to use, copy, modify, merge, publish,
|
9
|
+
distribute, sublicense, and/or sell copies of the Software, and to
|
10
|
+
permit persons to whom the Software is furnished to do so, subject to
|
11
|
+
the following conditions:
|
12
|
+
|
13
|
+
The above copyright notice and this permission notice shall be
|
14
|
+
included in all copies or substantial portions of the Software.
|
15
|
+
|
16
|
+
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
|
17
|
+
EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
|
18
|
+
MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
|
19
|
+
NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
|
20
|
+
LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
|
21
|
+
OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
|
22
|
+
WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
|
data/README.md
ADDED
@@ -0,0 +1,29 @@
|
|
1
|
+
# Clustering
|
2
|
+
|
3
|
+
TODO: Write a gem description
|
4
|
+
|
5
|
+
## Installation
|
6
|
+
|
7
|
+
Add this line to your application's Gemfile:
|
8
|
+
|
9
|
+
gem 'clustering'
|
10
|
+
|
11
|
+
And then execute:
|
12
|
+
|
13
|
+
$ bundle
|
14
|
+
|
15
|
+
Or install it yourself as:
|
16
|
+
|
17
|
+
$ gem install clustering
|
18
|
+
|
19
|
+
## Usage
|
20
|
+
|
21
|
+
TODO: Write usage instructions here
|
22
|
+
|
23
|
+
## Contributing
|
24
|
+
|
25
|
+
1. Fork it
|
26
|
+
2. Create your feature branch (`git checkout -b my-new-feature`)
|
27
|
+
3. Commit your changes (`git commit -am 'Add some feature'`)
|
28
|
+
4. Push to the branch (`git push origin my-new-feature`)
|
29
|
+
5. Create new Pull Request
|
data/Rakefile
ADDED
data/clustering.gemspec
ADDED
@@ -0,0 +1,19 @@
|
|
1
|
+
# -*- encoding: utf-8 -*-
|
2
|
+
lib = File.expand_path('../lib', __FILE__)
|
3
|
+
$LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
|
4
|
+
require 'clustering/version'
|
5
|
+
|
6
|
+
Gem::Specification.new do |gem|
|
7
|
+
gem.name = "clustering"
|
8
|
+
gem.version = Clustering::VERSION
|
9
|
+
gem.authors = ["the-architect"]
|
10
|
+
gem.email = ["marcel.scherf@epicteams.com"]
|
11
|
+
gem.description = %q{Cluster elements that are connected}
|
12
|
+
gem.summary = %q{Cluster elements}
|
13
|
+
gem.homepage = ""
|
14
|
+
|
15
|
+
gem.files = `git ls-files`.split($/)
|
16
|
+
gem.executables = gem.files.grep(%r{^bin/}).map{ |f| File.basename(f) }
|
17
|
+
gem.test_files = gem.files.grep(%r{^(test|spec|features)/})
|
18
|
+
gem.require_paths = ["lib"]
|
19
|
+
end
|
@@ -0,0 +1,57 @@
|
|
1
|
+
module Clustering
|
2
|
+
|
3
|
+
class Simple
|
4
|
+
|
5
|
+
# input: "data" should be an array of arrays
|
6
|
+
# each array should contain elements that are connected to each other
|
7
|
+
# elements are counted as often as they occur in the arrays
|
8
|
+
# this class does not make sure to only have unique elements in an array
|
9
|
+
# [
|
10
|
+
# [1,2,3],
|
11
|
+
# [2,3],
|
12
|
+
# [3,1]
|
13
|
+
# ]
|
14
|
+
def initialize(data)
|
15
|
+
@original = data
|
16
|
+
end
|
17
|
+
|
18
|
+
# create a hash of hashes which contains the grade of linkage between elements
|
19
|
+
# connections[3][4] #=> 2
|
20
|
+
def connections
|
21
|
+
@connections ||= @original.inject(Hash.new{|h,k| h[k] = Hash.new(0)}) do |akk, e|
|
22
|
+
e.each do |key|
|
23
|
+
e.each do |id|
|
24
|
+
akk[key][id] += 1 unless key == id
|
25
|
+
end
|
26
|
+
end
|
27
|
+
akk
|
28
|
+
end
|
29
|
+
end
|
30
|
+
|
31
|
+
def relations
|
32
|
+
@relations ||= connections.inject(Hash.new{|h,k| h[k] = Hash.new{|h,k| h[k] = Array.new }}) do |akk, e|
|
33
|
+
e.last.each do |k,v|
|
34
|
+
akk[e.first][v].push k
|
35
|
+
end
|
36
|
+
akk
|
37
|
+
end
|
38
|
+
end
|
39
|
+
|
40
|
+
def clusters(threshold = 2)
|
41
|
+
relations.inject(Hash.new{|h,k| h[k] = Array.new }) do |akk, e|
|
42
|
+
key, values = *e
|
43
|
+
keys = values.keys.sort.select{|s| s >= threshold}
|
44
|
+
keys.each do |k|
|
45
|
+
akk[key].concat values[k]
|
46
|
+
end
|
47
|
+
akk
|
48
|
+
end
|
49
|
+
end
|
50
|
+
|
51
|
+
def strength?(a, b)
|
52
|
+
connections[a][b]
|
53
|
+
end
|
54
|
+
|
55
|
+
end
|
56
|
+
|
57
|
+
end
|
data/lib/clustering.rb
ADDED
@@ -0,0 +1,31 @@
|
|
1
|
+
require_relative '../../spec_helper'
|
2
|
+
|
3
|
+
describe Clustering::Simple do
|
4
|
+
|
5
|
+
subject{ Clustering::Simple.new(TEST_DATA.clone.freeze) }
|
6
|
+
|
7
|
+
it 'should find count connections from data' do
|
8
|
+
connections = subject.connections
|
9
|
+
connections.keys.should_not be_empty
|
10
|
+
|
11
|
+
connections[3][4].should eql 2
|
12
|
+
end
|
13
|
+
|
14
|
+
it 'should find strength between elements' do
|
15
|
+
subject.strength?(3,4).should eql 2
|
16
|
+
end
|
17
|
+
|
18
|
+
it 'should build relations and put them in strength buckets' do
|
19
|
+
relations = subject.relations
|
20
|
+
relations[3][2].should eql [1,4]
|
21
|
+
end
|
22
|
+
|
23
|
+
it 'should find clusters' do
|
24
|
+
clusters = subject.clusters
|
25
|
+
clusters.keys.sort.should eql [1,3,4]
|
26
|
+
clusters[1].should eql [3]
|
27
|
+
clusters[3].should eql [1,4]
|
28
|
+
clusters[4].should eql [3]
|
29
|
+
end
|
30
|
+
|
31
|
+
end
|
data/spec/spec_helper.rb
ADDED
@@ -0,0 +1,17 @@
|
|
1
|
+
require 'rspec/autorun'
|
2
|
+
|
3
|
+
RSpec.configure do |config|
|
4
|
+
config.mock_with :mocha
|
5
|
+
config.treat_symbols_as_metadata_keys_with_true_values = true
|
6
|
+
config.filter_run_excluding :wip => true
|
7
|
+
end
|
8
|
+
|
9
|
+
require_relative '../lib/clustering'
|
10
|
+
|
11
|
+
# these ids are related to each other
|
12
|
+
# they could represent tag-ids for each user profile
|
13
|
+
TEST_DATA = [
|
14
|
+
[1,3,4,5],
|
15
|
+
[2,3,4],
|
16
|
+
[1,3,8,7]
|
17
|
+
]
|
metadata
ADDED
@@ -0,0 +1,65 @@
|
|
1
|
+
--- !ruby/object:Gem::Specification
|
2
|
+
name: clustering
|
3
|
+
version: !ruby/object:Gem::Version
|
4
|
+
version: 0.0.1
|
5
|
+
prerelease:
|
6
|
+
platform: ruby
|
7
|
+
authors:
|
8
|
+
- the-architect
|
9
|
+
autorequire:
|
10
|
+
bindir: bin
|
11
|
+
cert_chain: []
|
12
|
+
date: 2012-12-18 00:00:00.000000000 Z
|
13
|
+
dependencies: []
|
14
|
+
description: Cluster elements that are connected
|
15
|
+
email:
|
16
|
+
- marcel.scherf@epicteams.com
|
17
|
+
executables: []
|
18
|
+
extensions: []
|
19
|
+
extra_rdoc_files: []
|
20
|
+
files:
|
21
|
+
- .gitignore
|
22
|
+
- Gemfile
|
23
|
+
- Gemfile.lock
|
24
|
+
- LICENSE.txt
|
25
|
+
- README.md
|
26
|
+
- Rakefile
|
27
|
+
- clustering.gemspec
|
28
|
+
- lib/clustering.rb
|
29
|
+
- lib/clustering/simple.rb
|
30
|
+
- lib/clustering/version.rb
|
31
|
+
- spec/lib/clustering/simple_spec.rb
|
32
|
+
- spec/spec_helper.rb
|
33
|
+
homepage: ''
|
34
|
+
licenses: []
|
35
|
+
post_install_message:
|
36
|
+
rdoc_options: []
|
37
|
+
require_paths:
|
38
|
+
- lib
|
39
|
+
required_ruby_version: !ruby/object:Gem::Requirement
|
40
|
+
none: false
|
41
|
+
requirements:
|
42
|
+
- - ! '>='
|
43
|
+
- !ruby/object:Gem::Version
|
44
|
+
version: '0'
|
45
|
+
segments:
|
46
|
+
- 0
|
47
|
+
hash: -2856824314895578114
|
48
|
+
required_rubygems_version: !ruby/object:Gem::Requirement
|
49
|
+
none: false
|
50
|
+
requirements:
|
51
|
+
- - ! '>='
|
52
|
+
- !ruby/object:Gem::Version
|
53
|
+
version: '0'
|
54
|
+
segments:
|
55
|
+
- 0
|
56
|
+
hash: -2856824314895578114
|
57
|
+
requirements: []
|
58
|
+
rubyforge_project:
|
59
|
+
rubygems_version: 1.8.24
|
60
|
+
signing_key:
|
61
|
+
specification_version: 3
|
62
|
+
summary: Cluster elements
|
63
|
+
test_files:
|
64
|
+
- spec/lib/clustering/simple_spec.rb
|
65
|
+
- spec/spec_helper.rb
|