ckm_client 0.0.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
data/.travis.yml ADDED
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+ language: ruby
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+ rvm:
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+ - 1.9.3
data/Gemfile ADDED
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+ source :rubygems
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+
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+ gem 'soap4r-ruby1.9'
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+ gem 'jeweler'
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+
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+ group :test, :development do
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+ gem 'rspec'
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+ gem 'cucumber'
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+ gem 'guard'
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+ gem 'guard-spork'
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+ gem 'spork', '~> 1.0.0.rc'
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+ gem 'guard-rspec', '~> 2.4.0'
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+ gem 'guard-cucumber'
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+ gem 'listen', '0.6'
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+ gem 'rb-kqueue'
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+ gem 'libnotify'
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+ end
data/Gemfile.lock ADDED
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+ GEM
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+ remote: http://rubygems.org/
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+ specs:
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+ builder (3.1.4)
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+ childprocess (0.3.7)
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+ ffi (~> 1.0, >= 1.0.6)
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+ coderay (1.0.8)
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+ cucumber (1.2.1)
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+ builder (>= 2.1.2)
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+ diff-lcs (>= 1.1.3)
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+ gherkin (~> 2.11.0)
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+ json (>= 1.4.6)
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+ diff-lcs (1.1.3)
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+ ffi (1.3.1)
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+ gherkin (2.11.6)
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+ json (>= 1.7.6)
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+ git (1.2.5)
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+ guard (1.6.2)
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+ listen (>= 0.6.0)
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+ lumberjack (>= 1.0.2)
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+ pry (>= 0.9.10)
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+ terminal-table (>= 1.4.3)
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+ thor (>= 0.14.6)
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+ guard-cucumber (1.3.2)
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+ cucumber (>= 1.2.0)
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+ guard (>= 1.1.0)
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+ guard-rspec (2.4.0)
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+ guard (>= 1.1)
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+ rspec (~> 2.11)
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+ guard-spork (1.4.2)
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+ childprocess (>= 0.2.3)
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+ guard (>= 1.1)
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+ spork (>= 0.8.4)
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+ jeweler (1.8.4)
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+ bundler (~> 1.0)
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+ git (>= 1.2.5)
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+ rake
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+ rdoc
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+ json (1.7.6)
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+ libnotify (0.8.0)
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+ ffi (>= 1.0.11)
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+ listen (0.6.0)
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+ lumberjack (1.0.2)
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+ method_source (0.8.1)
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+ pry (0.9.11.4)
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+ coderay (~> 1.0.5)
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+ method_source (~> 0.8)
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+ slop (~> 3.4)
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+ rake (10.0.3)
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+ rb-kqueue (0.2.0)
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+ ffi (>= 0.5.0)
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+ rdoc (3.12)
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+ json (~> 1.4)
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+ rspec (2.12.0)
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+ rspec-core (~> 2.12.0)
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+ rspec-expectations (~> 2.12.0)
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+ rspec-mocks (~> 2.12.0)
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+ rspec-core (2.12.2)
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+ rspec-expectations (2.12.1)
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+ diff-lcs (~> 1.1.3)
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+ rspec-mocks (2.12.2)
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+ slop (3.4.3)
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+ soap4r-ruby1.9 (2.0.5)
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+ spork (1.0.0rc3)
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+ terminal-table (1.4.5)
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+ thor (0.17.0)
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+
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+ PLATFORMS
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+ ruby
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+
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+ DEPENDENCIES
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+ cucumber
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+ guard
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+ guard-cucumber
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+ guard-rspec (~> 2.4.0)
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+ guard-spork
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+ jeweler
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+ libnotify
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+ listen (= 0.6)
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+ rb-kqueue
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+ rspec
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+ soap4r-ruby1.9
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+ spork (~> 1.0.0.rc)
data/Guardfile ADDED
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+ guard 'spork' do
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+ watch('Gemfile')
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+ watch('Gemfile.lock')
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+ watch('spec/spec_helper.rb') { :rspec }
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+ watch(%r{features/support/}) { :cucumber }
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+ end
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+
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+ guard 'cucumber', cli: '--format progress --no-profile --drb' do
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+ watch(%r{^features/.+\.feature$})
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+ watch(%r{^features/support/.+$}) { 'features' }
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+ watch(%r{^features/step_definitions/(.+)_steps\.rb$}) { |m| Dir[File.join("**/#{m[1]}.feature")][0] || 'features' }
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+ end
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+
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+ guard 'rspec', :version => 2, cli: '--drb' do
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+ watch(%r{^spec/.+_spec\.rb$})
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+ watch(%r{^lib/(.+)\.rb$}) { |m| "spec/lib/#{m[1]}_spec.rb" }
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+ watch('spec/spec_helper.rb') { "spec" }
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+ end
data/LICENSE.txt ADDED
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+ This product is under Apache 2.0 license
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+
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+ Copyright [2013] Shinji Kobayashi, openEHR.jp
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+
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+ Licensed under the Apache License, Version 2.0 (the "License");
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+ you may not use this file except in compliance with the License.
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+ You may obtain a copy of the License at
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+
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+ http://www.apache.org/licenses/LICENSE-2.0
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+
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+ Unless required by applicable law or agreed to in writing, software
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+ distributed under the License is distributed on an "AS IS" BASIS,
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+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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+ See the License for the specific language governing permissions and
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+ limitations under the License.
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+
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+
data/README.md ADDED
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+ ckm_client
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+ ==========
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+
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+ A client module for the openEHR clincal knowledge manager
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+
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+ Usage
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+ ----------
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+ ckmc <command> <args>
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+
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+ Commands supported:
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+ fetch Retrieve archetype by archetype_id
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+ search query archetype by keyword
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+ help show this help
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+
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+ License
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+ ----------
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+ This product is under Apache 2.0 License
data/Rakefile ADDED
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+ #!/usr/bin/env rake
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+ # encoding: utf-8
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+
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+ require 'rubygems'
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+ require 'bundler'
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+ require 'rake'
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+
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+ require 'jeweler'
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+ Jeweler::Tasks.new do |gem|
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+ # gem is a Gem::Specification... see http://docs.rubygems.org/read/chapter/20 for more options
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+ gem.name = "ckm_client"
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+ gem.homepage = "http://github.com/skoba/ckm_client"
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+ gem.license = "Apache 2.0"
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+ gem.summary = %Q{The openEHR CKM command line client}
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+ gem.description = %Q{A client module for openEHR clinical knowlege manager}
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+ gem.email = "skoba@moss.gr.jp"
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+ gem.authors = ["Shinji KOBAYASHI"]
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+ # dependencies defined in Gemfile
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+ end
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+ Jeweler::RubygemsDotOrgTasks.new
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+
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+ require 'rspec/core'
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+ require 'rspec/core/rake_task'
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+ RSpec::Core::RakeTask.new(:spec) do |spec|
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+ spec.pattern = FileList['spec/**/*_spec.rb']
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+ end
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+
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+
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+ require 'cucumber'
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+ require 'cucumber/rake/task'
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+
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+ Cucumber::Rake::Task.new(:features) do |t|
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+ t.cucumber_opts = "features --format pretty"
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+ end
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+
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+ task :default => [:spec, :features]
data/VERSION ADDED
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+ 0.0.1
data/bin/ckmc ADDED
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+ #!/usr/bin/env ruby
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+ $:.unshift(File.expand_path('../../lib', __FILE__))
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+ require 'openehr/ckm_client'
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+
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+ case ARGV.shift
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+ when 'help'
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+ puts <<USAGE
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+ Usage:
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+ ckmc <command> [<args>]
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+
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+ Commands supported:
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+ fetch Retrieve archetype by archetype_id
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+ search query archetype by keyword
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+ help show this help
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+ USAGE
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+ when 'fetch'
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+ puts OpenEHR::CKMClient.new.fetch(ARGV[0])
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+ when 'search'
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+ puts 'Not yet implemented'
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+ end
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+ Feature: CKM Client access CKM repository
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+
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+ CKM(Clinical Knowledge Manager) is a repository of archetypes, which
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+ contains established clincal inforomation models maintained by the
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+ openEHR Project(http://www.openehr.org). This CKM client accesses
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+ and queries archetype to CKM(http://www.openehr.org/knowledge/) or
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+ others.
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+
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+ Scenario: repository is assigned by constructor
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+ Given a CKM repository
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+ When I cunstruct CKM client instance with repository option
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+ Then CKM repository is assigned
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+
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+ Scenario: repository is not assigned
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+ Given No repository assigned
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+ When I construct CKM client instance
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+ Then The openEHR official CKM is assigned as default
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+
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+ Scenario: fetch adl file by archetype ID
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+ Given archetype ID
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+ When I fetch adl file by archetype ID
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+ Then ID matched archetype should be retrieved
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+ OPENEHR_CKM = 'http://openehr.org/knowledge/services/ArchetypeFinderBean?wsdl'
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+ Given /^a CKM repository$/ do
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+ @repository = 'http://www.openehr.org/'
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+ end
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+
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+ When /^I cunstruct CKM client instance with repository option$/ do
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+ @ckmc = OpenEHR::CKMClient.new(@repository)
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+ end
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+
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+ Then /^CKM repository is assigned$/ do
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+ @ckmc.repository.should == @repository
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+ end
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+
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+ Given /^No repository assigned$/ do
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+ end
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+
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+ When /^I construct CKM client instance$/ do
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+ @ckmc = OpenEHR::CKMClient.new
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+ end
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+
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+ Then /^The openEHR official CKM is assigned as default$/ do
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+ @ckmc.repository.should == OPENEHR_CKM
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+ end
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+
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+ Given /^archetype ID$/ do
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+ @archetype_id = 'openEHR-EHR-OBSERVATION.blood_pressure.v1'
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+ end
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+
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+ When /^I fetch adl file by archetype ID$/ do
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+ ckmc = OpenEHR::CKMClient.new
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+ @adl_file = ckmc.fetch(@archetype_id)
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+ end
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+
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+ Then /^ID matched archetype should be retrieved$/ do
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+ @adl_file.should match /#{@ardchetype_id}/
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+ end
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+
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+ require 'rubygems'
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+ require 'spork'
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+ #uncomment the following line to use spork with the debugger
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+ #require 'spork/ext/ruby-debug'
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+
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+ Spork.prefork do
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+ $LOAD_PATH << File.expand_path('../../../lib', __FILE__)
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+ require 'openehr'
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+ end
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+
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+ Spork.each_run do
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+
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+ end
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+
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+
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+
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+
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+
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+
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+ require 'soap/wsdlDriver'
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+ CKM_REPOSITORY = 'http://openehr.org/knowledge/services/ArchetypeFinderBean?wsdl'
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+ module OpenEHR
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+ class CKMClient
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+ attr_reader :repository
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+
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+ def initialize(repository=CKM_REPOSITORY)
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+ @repository = repository
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+ end
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+
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+ def fetch(id)
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+ SOAPDriver.new(@repository).get_adl_by_id(id)
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+ end
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+ end
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+
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+ class SOAPDriver
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+ def initialize(repository)
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+ @driver = SOAP::WSDLDriverFactory.new(repository).create_rpc_driver
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+ end
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+
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+ def get_adl_by_id(id)
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+ @driver.getArchetypeInADL(archetypeId: id).m_return
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+ end
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+ end
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+ end
data/lib/openehr.rb ADDED
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+ module OpenEHR
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+ autoload :CKMClient, 'openehr/ckm_client'
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+ end
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+ require 'spec_helper'
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+
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+ REPOSITORY = 'http://www.openehr.org/'
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+ OPENEHR_REPOSITORY = 'http://openehr.org/knowledge/services/ArchetypeFinderBean?wsdl'
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+ ARCHETYPE_ID = 'openEHR-EHR-OBSERVATION.blood_pressure.v1'
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+
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+ module OpenEHR
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+ describe CKMClient do
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+ describe "#initialize" do
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+ context 'repository is assigned as constructor parameter' do
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+ let(:ckmc) { OpenEHR::CKMClient.new(REPOSITORY) }
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+
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+ it 'respoistory is REPOSITORY' do
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+ ckmc.repository.should == REPOSITORY
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+ end
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+ end
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+
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+ context 'Default repository is openEHR CKM repository' do
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+ let(:ckmc) { OpenEHR::CKMClient.new }
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+
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+ it 'default repository is openEHR ckm repository' do
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+ ckmc.repository.should == OPENEHR_REPOSITORY
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+ end
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+ end
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+ end
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+
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+ describe "#fetch" do
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+ let(:ckmc) { OpenEHR::CKMClient.new }
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+
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+ it 'fetch archetype by id' do
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+ ckmc.fetch(ARCHETYPE_ID).should match /#{ARCHETYPE_ID}/
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+ end
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+ end
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+ end
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+ end
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+ require 'rubygems'
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+ require 'spork'
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+ require 'rspec'
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+
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+ Spork.prefork do
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+ $:.unshift(File.dirname(__FILE__) + '/../lib')
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+ require 'openehr'
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+ end
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+
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+ Spork.each_run do
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+
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+ end
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+
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+
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+
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+
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+
metadata ADDED
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+ --- !ruby/object:Gem::Specification
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+ name: ckm_client
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+ version: !ruby/object:Gem::Version
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+ version: 0.0.1
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+ prerelease:
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+ platform: ruby
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+ authors:
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+ - Shinji KOBAYASHI
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+ autorequire:
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+ bindir: bin
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+ cert_chain: []
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+ date: 2013-02-05 00:00:00.000000000 Z
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+ dependencies:
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+ - !ruby/object:Gem::Dependency
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+ name: soap4r-ruby1.9
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+ requirement: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :runtime
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
30
+ - !ruby/object:Gem::Dependency
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+ name: jeweler
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+ requirement: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :runtime
39
+ prerelease: false
40
+ version_requirements: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
45
+ version: '0'
46
+ - !ruby/object:Gem::Dependency
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+ name: rspec
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+ requirement: !ruby/object:Gem::Requirement
49
+ none: false
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+ requirements:
51
+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :development
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ - !ruby/object:Gem::Dependency
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+ name: cucumber
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+ requirement: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :development
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
75
+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
78
+ - !ruby/object:Gem::Dependency
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+ name: guard
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+ requirement: !ruby/object:Gem::Requirement
81
+ none: false
82
+ requirements:
83
+ - - ! '>='
84
+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :development
87
+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
89
+ none: false
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+ requirements:
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+ - - ! '>='
92
+ - !ruby/object:Gem::Version
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+ version: '0'
94
+ - !ruby/object:Gem::Dependency
95
+ name: guard-spork
96
+ requirement: !ruby/object:Gem::Requirement
97
+ none: false
98
+ requirements:
99
+ - - ! '>='
100
+ - !ruby/object:Gem::Version
101
+ version: '0'
102
+ type: :development
103
+ prerelease: false
104
+ version_requirements: !ruby/object:Gem::Requirement
105
+ none: false
106
+ requirements:
107
+ - - ! '>='
108
+ - !ruby/object:Gem::Version
109
+ version: '0'
110
+ - !ruby/object:Gem::Dependency
111
+ name: spork
112
+ requirement: !ruby/object:Gem::Requirement
113
+ none: false
114
+ requirements:
115
+ - - ~>
116
+ - !ruby/object:Gem::Version
117
+ version: 1.0.0.rc
118
+ type: :development
119
+ prerelease: false
120
+ version_requirements: !ruby/object:Gem::Requirement
121
+ none: false
122
+ requirements:
123
+ - - ~>
124
+ - !ruby/object:Gem::Version
125
+ version: 1.0.0.rc
126
+ - !ruby/object:Gem::Dependency
127
+ name: guard-rspec
128
+ requirement: !ruby/object:Gem::Requirement
129
+ none: false
130
+ requirements:
131
+ - - ~>
132
+ - !ruby/object:Gem::Version
133
+ version: 2.4.0
134
+ type: :development
135
+ prerelease: false
136
+ version_requirements: !ruby/object:Gem::Requirement
137
+ none: false
138
+ requirements:
139
+ - - ~>
140
+ - !ruby/object:Gem::Version
141
+ version: 2.4.0
142
+ - !ruby/object:Gem::Dependency
143
+ name: guard-cucumber
144
+ requirement: !ruby/object:Gem::Requirement
145
+ none: false
146
+ requirements:
147
+ - - ! '>='
148
+ - !ruby/object:Gem::Version
149
+ version: '0'
150
+ type: :development
151
+ prerelease: false
152
+ version_requirements: !ruby/object:Gem::Requirement
153
+ none: false
154
+ requirements:
155
+ - - ! '>='
156
+ - !ruby/object:Gem::Version
157
+ version: '0'
158
+ - !ruby/object:Gem::Dependency
159
+ name: listen
160
+ requirement: !ruby/object:Gem::Requirement
161
+ none: false
162
+ requirements:
163
+ - - '='
164
+ - !ruby/object:Gem::Version
165
+ version: '0.6'
166
+ type: :development
167
+ prerelease: false
168
+ version_requirements: !ruby/object:Gem::Requirement
169
+ none: false
170
+ requirements:
171
+ - - '='
172
+ - !ruby/object:Gem::Version
173
+ version: '0.6'
174
+ - !ruby/object:Gem::Dependency
175
+ name: rb-kqueue
176
+ requirement: !ruby/object:Gem::Requirement
177
+ none: false
178
+ requirements:
179
+ - - ! '>='
180
+ - !ruby/object:Gem::Version
181
+ version: '0'
182
+ type: :development
183
+ prerelease: false
184
+ version_requirements: !ruby/object:Gem::Requirement
185
+ none: false
186
+ requirements:
187
+ - - ! '>='
188
+ - !ruby/object:Gem::Version
189
+ version: '0'
190
+ - !ruby/object:Gem::Dependency
191
+ name: libnotify
192
+ requirement: !ruby/object:Gem::Requirement
193
+ none: false
194
+ requirements:
195
+ - - ! '>='
196
+ - !ruby/object:Gem::Version
197
+ version: '0'
198
+ type: :development
199
+ prerelease: false
200
+ version_requirements: !ruby/object:Gem::Requirement
201
+ none: false
202
+ requirements:
203
+ - - ! '>='
204
+ - !ruby/object:Gem::Version
205
+ version: '0'
206
+ description: A client module for openEHR clinical knowlege manager
207
+ email: skoba@moss.gr.jp
208
+ executables:
209
+ - ckmc
210
+ extensions: []
211
+ extra_rdoc_files:
212
+ - LICENSE.txt
213
+ - README.md
214
+ files:
215
+ - .travis.yml
216
+ - Gemfile
217
+ - Gemfile.lock
218
+ - Guardfile
219
+ - LICENSE.txt
220
+ - README.md
221
+ - Rakefile
222
+ - VERSION
223
+ - bin/ckmc
224
+ - features/ckm_client.feature
225
+ - features/step_definitions/ckm_client_steps.rb
226
+ - features/support/env.rb
227
+ - lib/openehr.rb
228
+ - lib/openehr/ckm_client.rb
229
+ - spec/openehr/ckm_client_spec.rb
230
+ - spec/spec_helper.rb
231
+ homepage: http://github.com/skoba/ckm_client
232
+ licenses:
233
+ - Apache 2.0
234
+ post_install_message:
235
+ rdoc_options: []
236
+ require_paths:
237
+ - lib
238
+ required_ruby_version: !ruby/object:Gem::Requirement
239
+ none: false
240
+ requirements:
241
+ - - ! '>='
242
+ - !ruby/object:Gem::Version
243
+ version: '0'
244
+ required_rubygems_version: !ruby/object:Gem::Requirement
245
+ none: false
246
+ requirements:
247
+ - - ! '>='
248
+ - !ruby/object:Gem::Version
249
+ version: '0'
250
+ requirements: []
251
+ rubyforge_project:
252
+ rubygems_version: 1.8.25
253
+ signing_key:
254
+ specification_version: 3
255
+ summary: The openEHR CKM command line client
256
+ test_files: []