cirneco 0.9.3 → 0.9.4

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
-  metadata.gz: dd3065adc1cb6911df346e860c593b574dabd85b
-  data.tar.gz: 06411e0894e4d5da3a5ec90bdfa0d2bd6341f0a1
+  metadata.gz: dec9f419a130f442d9566c1b1b8f14558cd9cc9c
+  data.tar.gz: a3f74b49e2091319e75133d095bbdfcf72617468
 SHA512:
-  metadata.gz: b5c3cb04cddf16c67508882eee5a20d2f49b092d38aa5aebddf855c8df6336d1b35533b7cb3cda01b0e1a9ed53b015ecda00cb97f08b611768cee912e2fa838f
-  data.tar.gz: c89fec1028b04d7c0833be8ba3ae47cfc9b172c4681cf5dfd592c7924c598e2fc5994ce1f9dc97661819b8d7584ddb20484073c7102dcae98c4a39d6288ab3aa
+  metadata.gz: 709e81691d11909d0eb8422da8b626598728a8833aa075f207f220863048f4228996b01a972d8453d87bf5a70fd41fcb319336d86612f8ced277511b985e486b
+  data.tar.gz: e203227e1b9088c0d31f4c4c7e3bb13f741011e3fae40ace161cc455dcea6ab0633f3acbabdbf7d91cd1c3259647d8f277c4d28ecc9fec47b80f0bec0615c05b

data/Gemfile.lock

@@ -1,7 +1,7 @@
 PATH
   remote: .
   specs:
-    cirneco (0.9.3)
+    cirneco (0.9.4)
       activesupport (~> 4.2, >= 4.2.5)
       base32-crockford-checksum (~> 0.2.2)
       bergamasco (~> 0.3)
@@ -22,7 +22,7 @@ GEM
       tzinfo (~> 1.1)
     addressable (2.3.8)
     base32-crockford-checksum (0.2.3)
-    bergamasco (0.3.9)
+    bergamasco (0.3.10)
       activesupport (~> 4.2, >= 4.2.5)
       addressable (~> 2.3.8)
       builder (~> 3.2, >= 3.2.2)

data/lib/cirneco/utils.rb

@@ -9,6 +9,8 @@ module Cirneco
     # "ZZZZZZZ" decoded as number
     UPPER_LIMIT = 34359738367
 
+    JATS_SCHEMA = File.expand_path("../../../resources/jats-1.1/JATS-journalpublishing1.xsd", __FILE__)
+
     LICENSES = {
       "https://creativecommons.org/licenses/by/4.0/" => "Creative Commons Attribution (CC-BY 4.0)",
       "https://creativecommons.org/publicdomain/zero/1.0/" => "Creative Commons Public Domain Dedication (CC0 1.0)"
@@ -325,6 +327,9 @@ module Cirneco
       metadata["publication_month"] = metadata.fetch("date", "")[5..6].to_i
       metadata["publication_day"] = metadata.fetch("date", "")[8..9].to_i
 
+      # metadata["accession_number"] = metadata["alternateName"]
+      metadata["journal_title"] = metadata.fetch("isPartOf", {}).fetch("name", nil)
+
       if metadata["description"].present?
         metadata["descriptions"] = [{ value: metadata["description"], description_type: "Abstract" }]
       end
@@ -342,7 +347,7 @@ module Cirneco
 
       metadata = metadata.extract!(*%w(publisher doi tags title author date
         publication_year publication_month publication_day license_name
-        license_url))
+        license_url accession_number journal_title))
     end
 
     def generate_jats_for_url(url, options={})
@@ -373,6 +378,13 @@ module Cirneco
       end.join("\n")
     end
 
+    def validate_jats(xml)
+      schema = Nokogiri::XML::Schema(open(JATS_SCHEMA))
+      puts schema.validate(Nokogiri::XML(xml))
+
+      OpenStruct.new(body: { "errors" => schema.validate(Nokogiri::XML(xml)).map { |error| { "title" => error.to_s } } })
+    end
+
     def url_from_path(site_url, filepath)
       site_url.to_s.chomp("\\") + "/" + File.basename(filepath)[0..-9] + "/"
     end
@@ -428,7 +440,7 @@ module Cirneco
     def filepath_from_url(url, options={})
       if doi_from_url(url)
         response = Maremma.head(url, limit: 0)
-        url = response.headers.fetch("Location", "")
+        url = response.headers.present? ? response.headers.fetch("Location", "") : ""
       end
 
       uri = Addressable::URI.parse(url.gsub(Dir.pwd + options[:build_dir].to_s, "")

data/lib/cirneco/version.rb

@@ -1,3 +1,3 @@
 module Cirneco
-  VERSION = "0.9.3"
+  VERSION = "0.9.4"
 end