chroma-db 0.1.0 → 0.2.0

data/notebook/Chroma Gem.ipynb

@@ -0,0 +1,851 @@
+{
+ "cells": [
+  {
+   "cell_type": "markdown",
+   "id": "1a0636e0",
+   "metadata": {},
+   "source": [
+    "# Chroma Ruby Gem"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "3a5b8755",
+   "metadata": {},
+   "source": [
+    "## Database\n",
+    "\n",
+    "Database operations for Chroma"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "1f0575c2",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "require \"logger\"\n",
+    "require \"json\"\n",
+    "require \"securerandom\"\n",
+    "require \"open3\"\n",
+    "\n",
+    "# Requiere Chroma Ruby client.\n",
+    "require \"chroma-db\"\n",
+    "\n",
+    "# Configure Chroma's host. Here you can specify your own host.\n",
+    "Chroma.connect_host = \"http://localhost:8000\"\n",
+    "Chroma.logger = Logger.new($stdout)\n",
+    "Chroma.log_level = Chroma::LEVEL_ERROR\n",
+    "\n",
+    "# Check connection with Database's heartbeat\n",
+    "response = Chroma::Resources::Database.heartbeat\n",
+    "\n",
+    "IRuby.display \"Heartbear timestamp #{response[\"nanosecond heartbeat\"]}\"\n",
+    "\n",
+    "# Check current Chrome server version\n",
+    "version = Chroma::Resources::Database.version\n",
+    "\n",
+    "IRuby.display \"Chrome server version #{version}\"\n",
+    "\n",
+    "# Reset database (DANGER: This deletes all previos data)\n",
+    "Chroma::Resources::Database.reset"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "2c3c074f",
+   "metadata": {},
+   "source": [
+    "## Collections operations"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "708a5935",
+   "metadata": {},
+   "source": [
+    "Collection operations for Chroma"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 2,
+   "id": "dfc806b5",
+   "metadata": {
+    "scrolled": true
+   },
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "\"Collections in database 0\""
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    },
+    {
+     "data": {
+      "text/plain": [
+       "#<Chroma::Resources::Collection:0x000000010551a878 @name=\"ruby-3.0\", @metadata={\"lang\"=>\"ruby\", \"gem\"=>\"chroma-rb\"}>"
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    },
+    {
+     "data": {
+      "text/plain": [
+       "\"Collections in database 1\""
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    },
+    {
+     "data": {
+      "text/plain": [
+       "\"Collections in database 0\""
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    },
+    {
+     "data": {
+      "text/plain": [
+       "#<Chroma::Resources::Collection:0x0000000104d98190 @name=\"ruby-3.0\", @metadata={\"lang\"=>\"ruby\", \"gem\"=>\"chroma-rb\"}>"
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    },
+    {
+     "data": {
+      "text/plain": [
+       "#<Chroma::Resources::Collection:0x0000000105577078 @name=\"ruby-3.2\", @metadata={\"lang\"=>\"ruby\", \"gem\"=>\"chroma-rb\"}>"
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    }
+   ],
+   "source": [
+    "# Confirm that database has no collections\n",
+    "collections = Chroma::Resources::Collection.list\n",
+    "\n",
+    "collection_name = \"ruby-3.0\"\n",
+    "\n",
+    "IRuby.display \"Collections in database #{collections.size}\"\n",
+    "\n",
+    "# Create a new collection\n",
+    "collection = Chroma::Resources::Collection.create(collection_name, {lang: \"ruby\", gem: \"chroma-rb\"})\n",
+    "\n",
+    "IRuby.display collection\n",
+    "\n",
+    "# Confirm that database has no collections\n",
+    "collections = Chroma::Resources::Collection.list\n",
+    "\n",
+    "IRuby.display \"Collections in database #{collections.size}\"\n",
+    "\n",
+    "# Delete collection\n",
+    "Chroma::Resources::Collection.delete(collection_name)\n",
+    "\n",
+    "# Re-Confirm that database has no collections\n",
+    "collections = Chroma::Resources::Collection.list\n",
+    "\n",
+    "IRuby.display \"Collections in database #{collections.size}\"\n",
+    "\n",
+    "# Create the collection again\n",
+    "Chroma::Resources::Collection.create(collection_name, {lang: \"ruby\", gem: \"chroma-rb\"})\n",
+    "\n",
+    "# Get the collection from database\n",
+    "collection = Chroma::Resources::Collection.get(collection_name)\n",
+    "IRuby.display collection\n",
+    "\n",
+    "# Modify collection name\n",
+    "new_collection_name = \"ruby-3.2\"\n",
+    "collection.modify(new_collection_name)\n",
+    "\n",
+    "# Get modified collection from database\n",
+    "collection = Chroma::Resources::Collection.get(new_collection_name)\n",
+    "IRuby.display collection"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "36b82a17",
+   "metadata": {},
+   "source": [
+    "### Naive Ruby helper methods"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 3,
+   "id": "8708d9c5",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       ":run_system"
+      ]
+     },
+     "execution_count": 3,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "class Document\n",
+    "  attr_reader :content, :metadata\n",
+    "  \n",
+    "  def initialize(content, metadata = {})\n",
+    "    @content = content\n",
+    "    @metadata = metadata\n",
+    "  end\n",
+    "end\n",
+    "\n",
+    "class TextLoader\n",
+    "  \n",
+    "  \n",
+    "  def initialize(file)\n",
+    "    @file = file\n",
+    "  end\n",
+    "  \n",
+    "  def load\n",
+    "    [Document.new(File.read(@file), {source: @file})]\n",
+    "  end\n",
+    "end\n",
+    "\n",
+    "class RecursiveWordTextSplitter\n",
+    "  def initialize(chunk_size, chunk_overlap)\n",
+    "    @chunk_size = chunk_size\n",
+    "    @chunk_overlap = chunk_overlap\n",
+    "  end\n",
+    "\n",
+    "  def split_documents(documents)\n",
+    "    original_documents = Array(documents)\n",
+    "    \n",
+    "    new_documents = []\n",
+    "    original_documents.each do |document|\n",
+    "      texts = split_text(document.content)\n",
+    "      puts texts.size\n",
+    "      texts.each do |text|\n",
+    "        new_documents << Document.new(text, document.metadata)\n",
+    "      end\n",
+    "    end\n",
+    "    \n",
+    "    new_documents\n",
+    "  end\n",
+    "  \n",
+    "  def split_text(text)\n",
+    "    split_recursive(text, 0, [])\n",
+    "  end\n",
+    "\n",
+    "  private\n",
+    "\n",
+    "  def split_recursive(text, start_index, chunks)\n",
+    "    # Base case: If the remaining word count is less than the chunk size, return the chunks\n",
+    "    if start_index + @chunk_size > text.length\n",
+    "      chunks << text[start_index..-1]\n",
+    "      return chunks\n",
+    "    end\n",
+    "\n",
+    "    # Calculate the end index of the current chunk\n",
+    "    end_index = start_index + @chunk_size\n",
+    "\n",
+    "    # Add the current chunk to the array\n",
+    "    chunk = text[start_index...end_index]\n",
+    "    position = detect_last_whitespace_or_line_return_position(chunk)\n",
+    "    chunks << chunk[0..position]&.strip\n",
+    "\n",
+    "    # Calculate the next start index with overlap\n",
+    "    next_start_index = end_index - @chunk_overlap\n",
+    "\n",
+    "    # Recursively split the remaining words\n",
+    "    split_recursive(text, next_start_index, chunks)\n",
+    "  end\n",
+    "  \n",
+    "  def detect_last_whitespace_or_line_return_position(string)\n",
+    "    position = string.rindex(/\\s|\\n/)\n",
+    "    position.nil? ? -1 : position\n",
+    "  end\n",
+    "end\n",
+    "\n",
+    "def run_system(command)\n",
+    "  stdin, stdout, stderr, wait_thr = Open3.popen3(command)\n",
+    "  stdout_data = stdout.gets(nil)\n",
+    "  stdout.close\n",
+    "  stderr_data = stderr.gets(nil)\n",
+    "  stderr.close\n",
+    "  exit_code = wait_thr.value\n",
+    "  \n",
+    "  [stdout_data, stderr_data, exit_code]\n",
+    "end"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "01f60953",
+   "metadata": {},
+   "source": [
+    "## Transform texts"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "733db3fb",
+   "metadata": {},
+   "source": [
+    "Using the naive Ruby classes transforms documents into chunks"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 4,
+   "id": "f6fcee33",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "1"
+      ]
+     },
+     "execution_count": 4,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "documents = TextLoader.new(\"ruby.txt\").load\n",
+    "documents.size"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 5,
+   "id": "f00e5431",
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "2\n"
+     ]
+    },
+    {
+     "data": {
+      "text/plain": [
+       "2"
+      ]
+     },
+     "execution_count": 5,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "text_splitter = RecursiveWordTextSplitter.new(chunk_size=1000, chunk_overlap=200)\n",
+    "texts = text_splitter.split_documents(documents)\n",
+    "texts.size"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 6,
+   "id": "47ec27a0",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "#<#<Class:0x0000000104f880e0>::Document:0x00000001055db370 @content=\"Array#any?\\n\\nany? → true or false\\nany? {|element| ... } → true or false\\nany?(obj) → true or false\\n\\nReturns true if any element of self meets a given criterion.\\n\\nWith no block given and no argument, returns true if self has any truthy element, false otherwise:\\n\\n[nil, 0, false].any? # => true\\n[nil, false].any? # => false\\n[].any? # => false\\nWith a block given and no argument, calls the block with each element in self; returns true if the block returns any truthy value, false otherwise:\\n\\n[0, 1, 2].any? {|element| element > 1 } # => true\\n[0, 1, 2].any? {|element| element > 2 } # => false\\nIf argument obj is given, returns true if obj.=== any element, false otherwise:\\n\\n['food', 'drink'].any?(/foo/) # => true\\n['food', 'drink'].any?(/bar/) # => false\\n[].any?(/foo/) # => false\\n[0, 1, 2].any?(1) # => true\\n[0, 1, 2].any?(3) # => false\\nRelated: Enumerable#any?\\n\\n\\nArray#map Array#map!\\n\\nmap {|element| ... } → new_array\\nmap → new_enumerator\\nCalls the block, if given, with each element of self; returns\", @metadata={:source=>\"ruby.txt\"}>"
+      ]
+     },
+     "execution_count": 6,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "texts[0]"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "77a5327e",
+   "metadata": {},
+   "source": [
+    "**Prepare content**"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 7,
+   "id": "44354d3b",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "[\"Array#any?\\n\\nany? → true or false\\nany? {|element| ... } → true or false\\nany?(obj) → true or false\\n\\nReturns true if any element of self meets a given criterion.\\n\\nWith no block given and no argument, returns true if self has any truthy element, false otherwise:\\n\\n[nil, 0, false].any? # => true\\n[nil, false].any? # => false\\n[].any? # => false\\nWith a block given and no argument, calls the block with each element in self; returns true if the block returns any truthy value, false otherwise:\\n\\n[0, 1, 2].any? {|element| element > 1 } # => true\\n[0, 1, 2].any? {|element| element > 2 } # => false\\nIf argument obj is given, returns true if obj.=== any element, false otherwise:\\n\\n['food', 'drink'].any?(/foo/) # => true\\n['food', 'drink'].any?(/bar/) # => false\\n[].any?(/foo/) # => false\\n[0, 1, 2].any?(1) # => true\\n[0, 1, 2].any?(3) # => false\\nRelated: Enumerable#any?\\n\\n\\nArray#map Array#map!\\n\\nmap {|element| ... } → new_array\\nmap → new_enumerator\\nCalls the block, if given, with each element of self; returns\", \"true\\n[0, 1, 2].any?(3) # => false\\nRelated: Enumerable#any?\\n\\n\\nArray#map Array#map!\\n\\nmap {|element| ... } → new_array\\nmap → new_enumerator\\nCalls the block, if given, with each element of self; returns a new Array whose elements are the return values from the block:\\n\\na = [:foo, 'bar', 2]\\na1 = a.map {|element| element.class }\\na1 # => [Symbol, String, Integer]\\nReturns a new Enumerator if no block given:\\n\\na = [:foo, 'bar', 2]\\na1 = a.map\\na1 # => #<Enumerator: [:foo, \\\"bar\\\", 2]:map>\\nArray#collect is an alias for Array#map.\\n\\nAlias for: collect\\nmap! {|element| ... } → self\\nmap! → new_enumerator\\nCalls the block, if given, with each element; replaces the element with the block’s return value:\\n\\na = [:foo, 'bar', 2]\\na.map! { |element| element.class } # => [Symbol, String, Integer]\\nReturns a new Enumerator if no block given:\\n\\na = [:foo, 'bar', 2]\\na1 = a.map!\\na1 # => #<Enumerator: [:foo, \\\"bar\\\", 2]:map!>\\nArray#collect! is an alias for Array#map!.\\n\\nAlias for: collect!\\n\"]"
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    }
+   ],
+   "source": [
+    "contents = texts.map(&:content)\n",
+    "IRuby.display contents"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 8,
+   "id": "b5307484",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "[{:source=>\"ruby.txt\"}, {:source=>\"ruby.txt\"}]"
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    }
+   ],
+   "source": [
+    "metadatas = texts.map(&:metadata)\n",
+    "IRuby.display metadatas"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 9,
+   "id": "36c1b558",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "2060"
+      ]
+     },
+     "execution_count": 9,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "File.open(\"documents.json\",\"w\") do |f|\n",
+    "  f.write(contents.to_json)\n",
+    "end"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "9534bb26",
+   "metadata": {},
+   "source": [
+    "## Python glue"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "31eb215a",
+   "metadata": {},
+   "source": [
+    "We need Python glue to create text embeddings.\n",
+    "\n",
+    "I first try to use Ruby's gem **Pycall** to use HuggingFace's embeddings but I couldn't make it to work. The commented code shows what I was trying to do here and also shows the error.\n",
+    "\n",
+    "I opted to run Python code as system command and capture the output to bring it back to Ruby.\n",
+    "\n",
+    "Before you need the following Python libraries installed in your system."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 10,
+   "id": "02f9945a",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "#<Process::Status: pid 3263 exit 0>"
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    }
+   ],
+   "source": [
+    "stdout_data, stderr_data, exit_code = run_system(\"pip -q install langchain sentence_transformers InstructorEmbedding\")\n",
+    "\n",
+    "IRuby.display stdout_data\n",
+    "IRuby.display stderr_data\n",
+    "IRuby.display exit_code"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "eac28970",
+   "metadata": {},
+   "source": [
+    "**WARNING**: The following code might take a long time to run the first time, since it downloads and install HuggingFace models before creating embeddings for our texts."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 14,
+   "id": "b8e3026f",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "\"load INSTRUCTOR_Transformer\\nmax_seq_length  512\\nEmbeddings at embeddings.json\\n\""
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    },
+    {
+     "data": {
+      "text/plain": [
+       "#<Process::Status: pid 3304 exit 0>"
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    }
+   ],
+   "source": [
+    "# require \"pycall\"\n",
+    "# require \"pycall/import\"\n",
+    "# include PyCall::Import\n",
+    "\n",
+    "# pyimport \"InstructorEmbedding\" import INSTRUCTOR\n",
+    "# pyimport \"langchain.embeddings\", as: \"embeddings\"\n",
+    "\n",
+    "# from InstructorEmbedding import INSTRUCTOR\n",
+    "# from langchain.embeddings import HuggingFaceInstructEmbeddings\n",
+    "\n",
+    "# instructor_embeddings = embeddings.HuggingFaceInstructEmbeddings.new(\n",
+    "#  model_name: \"hkunlp/instructor-xl\",\n",
+    "#  model_kwargs: { \"device\" => \"cpu\" }  # Use cuda as value if you have a GPU.\n",
+    "# )\n",
+    "#\n",
+    "# PyCall::LibPythonFunctionNotFound: Unable to find the required symbol in libpython: _Py_NoneStruct\n",
+    "\n",
+    "command = <<~PYTHON\n",
+    "python - << EOF\n",
+    "import json\n",
+    "from InstructorEmbedding import INSTRUCTOR\n",
+    "from langchain.embeddings import HuggingFaceInstructEmbeddings\n",
+    "\n",
+    "from langchain.embeddings import HuggingFaceInstructEmbeddings\n",
+    "instructor_embeddings = HuggingFaceInstructEmbeddings(model_name=\"hkunlp/instructor-xl\", \n",
+    "                                                      model_kwargs={\"device\": \"cpu\"})\n",
+    "\n",
+    "with open(\"documents.json\") as f:\n",
+    "    file_content = f.read()\n",
+    "\n",
+    "documents = json.loads(file_content)\n",
+    "    \n",
+    "embeddings = instructor_embeddings.embed_documents(list(documents))\n",
+    "\n",
+    "with open(\"embeddings.json\", \"w\", encoding=\"utf-8\") as file:\n",
+    "    json.dump(embeddings, file, ensure_ascii=False, indent=4)\n",
+    "    \n",
+    "print(\"Embeddings at embeddings.json\")\n",
+    "EOF\n",
+    "PYTHON\n",
+    "\n",
+    "stdout_data, stderr_data, exit_code = run_system(command)\n",
+    "\n",
+    "IRuby.display stdout_data\n",
+    "IRuby.display stderr_data\n",
+    "IRuby.display exit_code\n"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "c40edc3a",
+   "metadata": {},
+   "source": [
+    "## Embeddings in collection"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "a8d84181",
+   "metadata": {},
+   "source": [
+    "Embedding operations for Chroma"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 15,
+   "id": "6234ad5d",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
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+      ]
+     },
+     "execution_count": 15,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "documents_embeddings = JSON.load(File.read(\"embeddings.json\"))"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 16,
+   "id": "1ac8bbf3",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "[#<Chroma::Resources::Embedding:0x00000001049957f0 @id=\"92118736-5484-4da4-b669-cde1cc03c369\", @embedding=[0.03228979930281639, 0.04374200478196144, 0.014979278668761253, -0.008304460905492306, -0.0036412617191672325, -0.04301042854785919, -0.08898357301950455, 0.010292756371200085, -0.04601152241230011, -0.01627073809504509, 0.0423235185444355, 0.035671770572662354, -0.03516373038291931, -0.10667434334754944, -0.0305192731320858, -0.00317957391962409, 0.00898097362369299, -0.04044022411108017, -0.03859616443514824, -2.847463656507898e-05, -0.02551359124481678, 0.015683457255363464, -0.03809453547000885, 0.026084054261446, 0.004630913957953453, -0.05073123052716255, -0.005383108276873827, 0.00900851096957922, -0.022124305367469788, 0.0008553847437724471, 0.03406482934951782, 0.006923138629645109, 0.016204921528697014, -0.0248075183480978, 0.020003201439976692, 0.015132367610931396, -0.01962454617023468, -0.03499720245599747, 0.01819889433681965, -0.0026789242401719093, 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true\\n['food', 'drink'].any?(/bar/) # => false\\n[].any?(/foo/) # => false\\n[0, 1, 2].any?(1) # => true\\n[0, 1, 2].any?(3) # => false\\nRelated: Enumerable#any?\\n\\n\\nArray#map Array#map!\\n\\nmap {|element| ... } → new_array\\nmap → new_enumerator\\nCalls the block, if given, with each element of self; returns\", @distance=nil>, #<Chroma::Resources::Embedding:0x0000000104995750 @id=\"8a63e0b7-9211-443a-b7f7-9ae387348749\", @embedding=[0.01605958677828312, 0.030003096908330917, 0.025761693716049194, -0.01957627572119236, -0.014232398942112923, -0.039433401077985764, -0.052275773137807846, -0.014058810658752918, -0.047918811440467834, -0.026954464614391327, 0.020939834415912628, 0.05790621042251587, -0.03408670797944069, -0.10953404009342194, -0.01096643041819334, -0.0011546972673386335, 0.007385305128991604, -0.05103980377316475, -0.04718507453799248, 0.017328854650259018, -0.04007676988840103, 0.033916473388671875, -0.04406605660915375, 0.019235199317336082, 0.003078594570979476, 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-0.007641963195055723, 0.06467071920633316, -0.018405135720968246, 0.046564701944589615, -0.04106247425079346, -0.021856514737010002, 0.07621057331562042, -0.04304991289973259, -0.04306909069418907, -0.0304432176053524, 0.01527604553848505, -0.005707693751901388, 0.038819730281829834, 0.012942232191562653, 0.01949952356517315, -0.021732443943619728, 0.03682343289256096, 0.061600372195243835, -0.020474111661314964, -0.012682368978857994, 0.04342878982424736, 0.04062390327453613, 0.011738210916519165, 0.023332543671131134, 0.005282609257847071, -0.01856761984527111, 0.0955662876367569], @metadata={:source=>\"ruby.txt\"}, @document=\"true\\n[0, 1, 2].any?(3) # => false\\nRelated: Enumerable#any?\\n\\n\\nArray#map Array#map!\\n\\nmap {|element| ... } → new_array\\nmap → new_enumerator\\nCalls the block, if given, with each element of self; returns a new Array whose elements are the return values from the block:\\n\\na = [:foo, 'bar', 2]\\na1 = a.map {|element| element.class }\\na1 # => [Symbol, String, Integer]\\nReturns a new Enumerator if no block given:\\n\\na = [:foo, 'bar', 2]\\na1 = a.map\\na1 # => #<Enumerator: [:foo, \\\"bar\\\", 2]:map>\\nArray#collect is an alias for Array#map.\\n\\nAlias for: collect\\nmap! {|element| ... } → self\\nmap! → new_enumerator\\nCalls the block, if given, with each element; replaces the element with the block’s return value:\\n\\na = [:foo, 'bar', 2]\\na.map! { |element| element.class } # => [Symbol, String, Integer]\\nReturns a new Enumerator if no block given:\\n\\na = [:foo, 'bar', 2]\\na1 = a.map!\\na1 # => #<Enumerator: [:foo, \\\"bar\\\", 2]:map!>\\nArray#collect! is an alias for Array#map!.\\n\\nAlias for: collect!\\n\", @distance=nil>]"
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    }
+   ],
+   "source": [
+    "embeddings = texts.map.with_index do |text, index|\n",
+    "  Chroma::Resources::Embedding.new(id: SecureRandom.uuid, embedding: documents_embeddings[index], metadata: metadatas[index], document: text.content) \n",
+    "end\n",
+    "\n",
+    "IRuby.display embeddings"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 17,
+   "id": "8556fdf6",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "true"
+      ]
+     },
+     "execution_count": 17,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "collection.add(embeddings)"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 18,
+   "id": "b045d12d",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "2"
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    }
+   ],
+   "source": [
+    "IRuby.display collection.count"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "8a641ecd",
+   "metadata": {},
+   "source": [
+    "### Vector Store naive implementation"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 19,
+   "id": "da118706",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       ":similarity_search"
+      ]
+     },
+     "execution_count": 19,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "class VectorStore\n",
+    "  def initialize(store, search_type = \"similarity\")\n",
+    "    @store = store\n",
+    "    @search_type\n",
+    "  end\n",
+    "  \n",
+    "  def relevant_documents(query)\n",
+    "    if @search_type == \"similarity\"\n",
+    "      @store.similarity_search(query)\n",
+    "    end\n",
+    "  end\n",
+    "  \n",
+    "  protected\n",
+    "  \n",
+    "  def text_to_embeddings(query)\n",
+    "    command = <<~PYTHON\n",
+    "python - << EOF\n",
+    "import json\n",
+    "from InstructorEmbedding import INSTRUCTOR\n",
+    "from langchain.embeddings import HuggingFaceInstructEmbeddings\n",
+    "\n",
+    "from langchain.embeddings import HuggingFaceInstructEmbeddings\n",
+    "instructor_embeddings = HuggingFaceInstructEmbeddings(model_name=\"hkunlp/instructor-xl\", \n",
+    "                                                      model_kwargs={\"device\": \"cpu\"})\n",
+    "    \n",
+    "embeddings = instructor_embeddings.embed_documents(list([\"#{query}\"]))\n",
+    "\n",
+    "print(\"========\")\n",
+    "print(embeddings)\n",
+    "EOF\n",
+    "PYTHON\n",
+    "\n",
+    "    stdout_data, stderr_data, exit_code = run_system(command)\n",
+    "    \n",
+    "    parse_output(stdout_data)\n",
+    "  end\n",
+    "  \n",
+    "  private\n",
+    "\n",
+    "  def parse_output(data)\n",
+    "    delimiter = \"========\"\n",
+    "    parsed_text = data.split(delimiter).last.strip\n",
+    "    \n",
+    "    return nil if parsed_text.nil?\n",
+    "    JSON.parse(parsed_text)\n",
+    "  end\n",
+    "  \n",
+    "  def run_system(command)\n",
+    "    stdin, stdout, stderr, wait_thr = Open3.popen3(command)\n",
+    "    stdout_data = stdout.gets(nil)\n",
+    "    stdout.close\n",
+    "    stderr_data = stderr.gets(nil)\n",
+    "    stderr.close\n",
+    "    exit_code = wait_thr.value\n",
+    "  \n",
+    "    [stdout_data, stderr_data, exit_code]\n",
+    "  end\n",
+    "end\n",
+    "\n",
+    "class ChromaVectorStore < VectorStore\n",
+    "  def similarity_search(query, k: 4, filter: {})\n",
+    "    query_embeddings = text_to_embeddings(query)\n",
+    "    \n",
+    "    @store.query(query_embeddings:, results: k, where: filter)\n",
+    "  end\n",
+    "end"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "id": "39419dac",
+   "metadata": {},
+   "source": [
+    "### Search for similiarity"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 20,
+   "id": "e1a46ead",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "[#<Chroma::Resources::Embedding:0x00000001046ac048 @id=\"92118736-5484-4da4-b669-cde1cc03c369\", @embedding=nil, @metadata={\"source\"=>\"ruby.txt\"}, @document=\"Array#any?\\n\\nany? → true or false\\nany? {|element| ... } → true or false\\nany?(obj) → true or false\\n\\nReturns true if any element of self meets a given criterion.\\n\\nWith no block given and no argument, returns true if self has any truthy element, false otherwise:\\n\\n[nil, 0, false].any? # => true\\n[nil, false].any? # => false\\n[].any? # => false\\nWith a block given and no argument, calls the block with each element in self; returns true if the block returns any truthy value, false otherwise:\\n\\n[0, 1, 2].any? {|element| element > 1 } # => true\\n[0, 1, 2].any? {|element| element > 2 } # => false\\nIf argument obj is given, returns true if obj.=== any element, false otherwise:\\n\\n['food', 'drink'].any?(/foo/) # => true\\n['food', 'drink'].any?(/bar/) # => false\\n[].any?(/foo/) # => false\\n[0, 1, 2].any?(1) # => true\\n[0, 1, 2].any?(3) # => false\\nRelated: Enumerable#any?\\n\\n\\nArray#map Array#map!\\n\\nmap {|element| ... } → new_array\\nmap → new_enumerator\\nCalls the block, if given, with each element of self; returns\", @distance=0.48262059688568115>, #<Chroma::Resources::Embedding:0x00000001046abff8 @id=\"8a63e0b7-9211-443a-b7f7-9ae387348749\", @embedding=nil, @metadata={\"source\"=>\"ruby.txt\"}, @document=\"true\\n[0, 1, 2].any?(3) # => false\\nRelated: Enumerable#any?\\n\\n\\nArray#map Array#map!\\n\\nmap {|element| ... } → new_array\\nmap → new_enumerator\\nCalls the block, if given, with each element of self; returns a new Array whose elements are the return values from the block:\\n\\na = [:foo, 'bar', 2]\\na1 = a.map {|element| element.class }\\na1 # => [Symbol, String, Integer]\\nReturns a new Enumerator if no block given:\\n\\na = [:foo, 'bar', 2]\\na1 = a.map\\na1 # => #<Enumerator: [:foo, \\\"bar\\\", 2]:map>\\nArray#collect is an alias for Array#map.\\n\\nAlias for: collect\\nmap! {|element| ... } → self\\nmap! → new_enumerator\\nCalls the block, if given, with each element; replaces the element with the block’s return value:\\n\\na = [:foo, 'bar', 2]\\na.map! { |element| element.class } # => [Symbol, String, Integer]\\nReturns a new Enumerator if no block given:\\n\\na = [:foo, 'bar', 2]\\na1 = a.map!\\na1 # => #<Enumerator: [:foo, \\\"bar\\\", 2]:map!>\\nArray#collect! is an alias for Array#map!.\\n\\nAlias for: collect!\\n\", @distance=0.5023157596588135>]"
+      ]
+     },
+     "execution_count": 20,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "vs = ChromaVectorStore.new(collection)\n",
+    "embeddings =  vs.similarity_search(\"array any?\", k: 2)"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 21,
+   "id": "ab282709",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "#<Chroma::Resources::Embedding:0x00000001046ac048 @id=\"92118736-5484-4da4-b669-cde1cc03c369\", @embedding=nil, @metadata={\"source\"=>\"ruby.txt\"}, @document=\"Array#any?\\n\\nany? → true or false\\nany? {|element| ... } → true or false\\nany?(obj) → true or false\\n\\nReturns true if any element of self meets a given criterion.\\n\\nWith no block given and no argument, returns true if self has any truthy element, false otherwise:\\n\\n[nil, 0, false].any? # => true\\n[nil, false].any? # => false\\n[].any? # => false\\nWith a block given and no argument, calls the block with each element in self; returns true if the block returns any truthy value, false otherwise:\\n\\n[0, 1, 2].any? {|element| element > 1 } # => true\\n[0, 1, 2].any? {|element| element > 2 } # => false\\nIf argument obj is given, returns true if obj.=== any element, false otherwise:\\n\\n['food', 'drink'].any?(/foo/) # => true\\n['food', 'drink'].any?(/bar/) # => false\\n[].any?(/foo/) # => false\\n[0, 1, 2].any?(1) # => true\\n[0, 1, 2].any?(3) # => false\\nRelated: Enumerable#any?\\n\\n\\nArray#map Array#map!\\n\\nmap {|element| ... } → new_array\\nmap → new_enumerator\\nCalls the block, if given, with each element of self; returns\", @distance=0.48262059688568115>"
+      ]
+     },
+     "execution_count": 21,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "embeddings[0]"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "4ef9404d",
+   "metadata": {},
+   "outputs": [],
+   "source": []
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Ruby 3.2.2",
+   "language": "ruby",
+   "name": "ruby"
+  },
+  "language_info": {
+   "file_extension": ".rb",
+   "mimetype": "application/x-ruby",
+   "name": "ruby",
+   "version": "3.2.2"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 5
+}