cheminee 0.1.5 → 0.1.7

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@@ -0,0 +1,223 @@
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+ =begin
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+ #Cheminée
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+
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+ #Cheminée: The Chemical Structure Search Engine
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+
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+ The version of the OpenAPI document: 1.0
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+
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+ Generated by: https://openapi-generator.tech
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+ OpenAPI Generator version: 7.1.0-SNAPSHOT
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+
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+ =end
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+
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+ require 'date'
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+ require 'time'
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+
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+ module Cheminee
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+ class PostIndexBulkResponseOk
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+ attr_accessor :statuses
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+
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+ # Attribute mapping from ruby-style variable name to JSON key.
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+ def self.attribute_map
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+ {
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+ :'statuses' => :'statuses'
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+ }
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+ end
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+
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+ # Returns all the JSON keys this model knows about
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+ def self.acceptable_attributes
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+ attribute_map.values
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+ end
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+
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+ # Attribute type mapping.
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+ def self.openapi_types
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+ {
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+ :'statuses' => :'Array<PostIndexBulkResponseOkStatus>'
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+ }
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+ end
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+
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+ # List of attributes with nullable: true
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+ def self.openapi_nullable
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+ Set.new([
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+ ])
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+ end
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+
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+ # Initializes the object
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+ # @param [Hash] attributes Model attributes in the form of hash
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+ def initialize(attributes = {})
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+ if (!attributes.is_a?(Hash))
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+ fail ArgumentError, "The input argument (attributes) must be a hash in `Cheminee::PostIndexBulkResponseOk` initialize method"
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+ end
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+
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+ # check to see if the attribute exists and convert string to symbol for hash key
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+ attributes = attributes.each_with_object({}) { |(k, v), h|
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+ if (!self.class.attribute_map.key?(k.to_sym))
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+ fail ArgumentError, "`#{k}` is not a valid attribute in `Cheminee::PostIndexBulkResponseOk`. Please check the name to make sure it's valid. List of attributes: " + self.class.attribute_map.keys.inspect
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+ end
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+ h[k.to_sym] = v
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+ }
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+
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+ if attributes.key?(:'statuses')
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+ if (value = attributes[:'statuses']).is_a?(Array)
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+ self.statuses = value
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+ end
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+ else
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+ self.statuses = nil
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+ end
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+ end
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+
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+ # Show invalid properties with the reasons. Usually used together with valid?
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+ # @return Array for valid properties with the reasons
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+ def list_invalid_properties
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+ warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
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+ invalid_properties = Array.new
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+ if @statuses.nil?
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+ invalid_properties.push('invalid value for "statuses", statuses cannot be nil.')
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+ end
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+
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+ invalid_properties
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+ end
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+
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+ # Check to see if the all the properties in the model are valid
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+ # @return true if the model is valid
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+ def valid?
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+ warn '[DEPRECATED] the `valid?` method is obsolete'
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+ return false if @statuses.nil?
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+ true
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+ end
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+
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+ # Checks equality by comparing each attribute.
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+ # @param [Object] Object to be compared
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+ def ==(o)
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+ return true if self.equal?(o)
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+ self.class == o.class &&
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+ statuses == o.statuses
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+ end
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+
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+ # @see the `==` method
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+ # @param [Object] Object to be compared
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+ def eql?(o)
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+ self == o
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+ end
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+
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+ # Calculates hash code according to all attributes.
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+ # @return [Integer] Hash code
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+ def hash
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+ [statuses].hash
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+ end
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+
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+ # Builds the object from hash
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+ # @param [Hash] attributes Model attributes in the form of hash
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+ # @return [Object] Returns the model itself
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+ def self.build_from_hash(attributes)
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+ return nil unless attributes.is_a?(Hash)
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+ attributes = attributes.transform_keys(&:to_sym)
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+ transformed_hash = {}
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+ openapi_types.each_pair do |key, type|
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+ if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
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+ transformed_hash["#{key}"] = nil
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+ elsif type =~ /\AArray<(.*)>/i
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+ # check to ensure the input is an array given that the attribute
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+ # is documented as an array but the input is not
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+ if attributes[attribute_map[key]].is_a?(Array)
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+ transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
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+ end
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+ elsif !attributes[attribute_map[key]].nil?
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+ transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
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+ end
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+ end
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+ new(transformed_hash)
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+ end
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+
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+ # Deserializes the data based on type
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+ # @param string type Data type
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+ # @param string value Value to be deserialized
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+ # @return [Object] Deserialized data
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+ def self._deserialize(type, value)
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+ case type.to_sym
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+ when :Time
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+ Time.parse(value)
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+ when :Date
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+ Date.parse(value)
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+ when :String
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+ value.to_s
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+ when :Integer
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+ value.to_i
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+ when :Float
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+ value.to_f
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+ when :Boolean
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+ if value.to_s =~ /\A(true|t|yes|y|1)\z/i
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+ true
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+ else
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+ false
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+ end
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+ when :Object
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+ # generic object (usually a Hash), return directly
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+ value
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+ when /\AArray<(?<inner_type>.+)>\z/
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+ inner_type = Regexp.last_match[:inner_type]
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+ value.map { |v| _deserialize(inner_type, v) }
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+ when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
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+ k_type = Regexp.last_match[:k_type]
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+ v_type = Regexp.last_match[:v_type]
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+ {}.tap do |hash|
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+ value.each do |k, v|
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+ hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
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+ end
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+ end
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+ else # model
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+ # models (e.g. Pet) or oneOf
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+ klass = Cheminee.const_get(type)
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+ klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
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+ end
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+ end
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+
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+ # Returns the string representation of the object
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+ # @return [String] String presentation of the object
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+ def to_s
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+ to_hash.to_s
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+ end
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+
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+ # to_body is an alias to to_hash (backward compatibility)
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+ # @return [Hash] Returns the object in the form of hash
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+ def to_body
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+ to_hash
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+ end
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+
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+ # Returns the object in the form of hash
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+ # @return [Hash] Returns the object in the form of hash
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+ def to_hash
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+ hash = {}
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+ self.class.attribute_map.each_pair do |attr, param|
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+ value = self.send(attr)
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+ if value.nil?
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+ is_nullable = self.class.openapi_nullable.include?(attr)
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+ next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
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+ end
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+
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+ hash[param] = _to_hash(value)
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+ end
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+ hash
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+ end
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+
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+ # Outputs non-array value in the form of hash
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+ # For object, use to_hash. Otherwise, just return the value
205
+ # @param [Object] value Any valid value
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+ # @return [Hash] Returns the value in the form of hash
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+ def _to_hash(value)
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+ if value.is_a?(Array)
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+ value.compact.map { |v| _to_hash(v) }
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+ elsif value.is_a?(Hash)
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+ {}.tap do |hash|
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+ value.each { |k, v| hash[k] = _to_hash(v) }
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+ end
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+ elsif value.respond_to? :to_hash
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+ value.to_hash
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+ else
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+ value
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+ end
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+ end
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+
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+ end
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+
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+ end
@@ -0,0 +1,223 @@
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+ =begin
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+ #Cheminée
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+
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+ #Cheminée: The Chemical Structure Search Engine
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+
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+ The version of the OpenAPI document: 1.0
7
+
8
+ Generated by: https://openapi-generator.tech
9
+ OpenAPI Generator version: 7.1.0-SNAPSHOT
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+
11
+ =end
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+
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+ require 'date'
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+ require 'time'
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+
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+ module Cheminee
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+ class PostIndexBulkResponseOkStatus
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+ attr_accessor :opcode
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+
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+ attr_accessor :error
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+
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+ # Attribute mapping from ruby-style variable name to JSON key.
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+ def self.attribute_map
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+ {
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+ :'opcode' => :'opcode',
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+ :'error' => :'error'
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+ }
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+ end
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+
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+ # Returns all the JSON keys this model knows about
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+ def self.acceptable_attributes
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+ attribute_map.values
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+ end
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+
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+ # Attribute type mapping.
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+ def self.openapi_types
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+ {
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+ :'opcode' => :'Integer',
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+ :'error' => :'String'
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+ }
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+ end
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+
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+ # List of attributes with nullable: true
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+ def self.openapi_nullable
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+ Set.new([
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+ ])
47
+ end
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+
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+ # Initializes the object
50
+ # @param [Hash] attributes Model attributes in the form of hash
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+ def initialize(attributes = {})
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+ if (!attributes.is_a?(Hash))
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+ fail ArgumentError, "The input argument (attributes) must be a hash in `Cheminee::PostIndexBulkResponseOkStatus` initialize method"
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+ end
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+
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+ # check to see if the attribute exists and convert string to symbol for hash key
57
+ attributes = attributes.each_with_object({}) { |(k, v), h|
58
+ if (!self.class.attribute_map.key?(k.to_sym))
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+ fail ArgumentError, "`#{k}` is not a valid attribute in `Cheminee::PostIndexBulkResponseOkStatus`. Please check the name to make sure it's valid. List of attributes: " + self.class.attribute_map.keys.inspect
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+ end
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+ h[k.to_sym] = v
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+ }
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+
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+ if attributes.key?(:'opcode')
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+ self.opcode = attributes[:'opcode']
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+ end
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+
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+ if attributes.key?(:'error')
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+ self.error = attributes[:'error']
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+ end
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+ end
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+
73
+ # Show invalid properties with the reasons. Usually used together with valid?
74
+ # @return Array for valid properties with the reasons
75
+ def list_invalid_properties
76
+ warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
77
+ invalid_properties = Array.new
78
+ invalid_properties
79
+ end
80
+
81
+ # Check to see if the all the properties in the model are valid
82
+ # @return true if the model is valid
83
+ def valid?
84
+ warn '[DEPRECATED] the `valid?` method is obsolete'
85
+ true
86
+ end
87
+
88
+ # Checks equality by comparing each attribute.
89
+ # @param [Object] Object to be compared
90
+ def ==(o)
91
+ return true if self.equal?(o)
92
+ self.class == o.class &&
93
+ opcode == o.opcode &&
94
+ error == o.error
95
+ end
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+
97
+ # @see the `==` method
98
+ # @param [Object] Object to be compared
99
+ def eql?(o)
100
+ self == o
101
+ end
102
+
103
+ # Calculates hash code according to all attributes.
104
+ # @return [Integer] Hash code
105
+ def hash
106
+ [opcode, error].hash
107
+ end
108
+
109
+ # Builds the object from hash
110
+ # @param [Hash] attributes Model attributes in the form of hash
111
+ # @return [Object] Returns the model itself
112
+ def self.build_from_hash(attributes)
113
+ return nil unless attributes.is_a?(Hash)
114
+ attributes = attributes.transform_keys(&:to_sym)
115
+ transformed_hash = {}
116
+ openapi_types.each_pair do |key, type|
117
+ if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
118
+ transformed_hash["#{key}"] = nil
119
+ elsif type =~ /\AArray<(.*)>/i
120
+ # check to ensure the input is an array given that the attribute
121
+ # is documented as an array but the input is not
122
+ if attributes[attribute_map[key]].is_a?(Array)
123
+ transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
124
+ end
125
+ elsif !attributes[attribute_map[key]].nil?
126
+ transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
127
+ end
128
+ end
129
+ new(transformed_hash)
130
+ end
131
+
132
+ # Deserializes the data based on type
133
+ # @param string type Data type
134
+ # @param string value Value to be deserialized
135
+ # @return [Object] Deserialized data
136
+ def self._deserialize(type, value)
137
+ case type.to_sym
138
+ when :Time
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+ Time.parse(value)
140
+ when :Date
141
+ Date.parse(value)
142
+ when :String
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+ value.to_s
144
+ when :Integer
145
+ value.to_i
146
+ when :Float
147
+ value.to_f
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+ when :Boolean
149
+ if value.to_s =~ /\A(true|t|yes|y|1)\z/i
150
+ true
151
+ else
152
+ false
153
+ end
154
+ when :Object
155
+ # generic object (usually a Hash), return directly
156
+ value
157
+ when /\AArray<(?<inner_type>.+)>\z/
158
+ inner_type = Regexp.last_match[:inner_type]
159
+ value.map { |v| _deserialize(inner_type, v) }
160
+ when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
161
+ k_type = Regexp.last_match[:k_type]
162
+ v_type = Regexp.last_match[:v_type]
163
+ {}.tap do |hash|
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+ value.each do |k, v|
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+ hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
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+ end
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+ end
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+ else # model
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+ # models (e.g. Pet) or oneOf
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+ klass = Cheminee.const_get(type)
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+ klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
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+ end
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+ end
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+
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+ # Returns the string representation of the object
176
+ # @return [String] String presentation of the object
177
+ def to_s
178
+ to_hash.to_s
179
+ end
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+
181
+ # to_body is an alias to to_hash (backward compatibility)
182
+ # @return [Hash] Returns the object in the form of hash
183
+ def to_body
184
+ to_hash
185
+ end
186
+
187
+ # Returns the object in the form of hash
188
+ # @return [Hash] Returns the object in the form of hash
189
+ def to_hash
190
+ hash = {}
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+ self.class.attribute_map.each_pair do |attr, param|
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+ value = self.send(attr)
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+ if value.nil?
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+ is_nullable = self.class.openapi_nullable.include?(attr)
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+ next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
196
+ end
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+
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+ hash[param] = _to_hash(value)
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+ end
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+ hash
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+ end
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+
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+ # Outputs non-array value in the form of hash
204
+ # For object, use to_hash. Otherwise, just return the value
205
+ # @param [Object] value Any valid value
206
+ # @return [Hash] Returns the value in the form of hash
207
+ def _to_hash(value)
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+ if value.is_a?(Array)
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+ value.compact.map { |v| _to_hash(v) }
210
+ elsif value.is_a?(Hash)
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+ {}.tap do |hash|
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+ value.each { |k, v| hash[k] = _to_hash(v) }
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+ end
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+ elsif value.respond_to? :to_hash
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+ value.to_hash
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+ else
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+ value
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+ end
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+ end
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+
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+ end
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+
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+ end
@@ -11,5 +11,5 @@ OpenAPI Generator version: 7.1.0-SNAPSHOT
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  =end
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  module Cheminee
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- VERSION = '0.1.5'
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+ VERSION = '0.1.7'
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  end
data/lib/cheminee.rb CHANGED
@@ -17,10 +17,15 @@ require 'cheminee/version'
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  require 'cheminee/configuration'
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  # Models
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+ require 'cheminee/models/bulk_request'
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+ require 'cheminee/models/bulk_request_doc'
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  require 'cheminee/models/create_index_error'
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  require 'cheminee/models/get_indexes_response_error'
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  require 'cheminee/models/index_meta'
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  require 'cheminee/models/list_index_response_err'
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+ require 'cheminee/models/post_index_bulk_response_error'
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+ require 'cheminee/models/post_index_bulk_response_ok'
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+ require 'cheminee/models/post_index_bulk_response_ok_status'
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  require 'cheminee/models/schema'
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  require 'cheminee/models/smile'
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  require 'cheminee/models/standardized_smile'
Binary file
@@ -0,0 +1,42 @@
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+ =begin
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+ #Cheminée
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+
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+ #Cheminée: The Chemical Structure Search Engine
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+
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+ The version of the OpenAPI document: 1.0
7
+
8
+ Generated by: https://openapi-generator.tech
9
+ OpenAPI Generator version: 7.1.0-SNAPSHOT
10
+
11
+ =end
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+
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+ require 'spec_helper'
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+ require 'json'
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+ require 'date'
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+
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+ # Unit tests for Cheminee::BulkRequestDoc
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+ # Automatically generated by openapi-generator (https://openapi-generator.tech)
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+ # Please update as you see appropriate
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+ describe Cheminee::BulkRequestDoc do
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+ let(:instance) { Cheminee::BulkRequestDoc.new }
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+
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+ describe 'test an instance of BulkRequestDoc' do
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+ it 'should create an instance of BulkRequestDoc' do
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+ # uncomment below to test the instance creation
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+ #expect(instance).to be_instance_of(Cheminee::BulkRequestDoc)
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+ end
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+ end
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+
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+ describe 'test attribute "smile"' do
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+ it 'should work' do
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+ # assertion here. ref: https://rspec.info/features/3-12/rspec-expectations/built-in-matchers/
33
+ end
34
+ end
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+
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+ describe 'test attribute "extra_data"' do
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+ it 'should work' do
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+ # assertion here. ref: https://rspec.info/features/3-12/rspec-expectations/built-in-matchers/
39
+ end
40
+ end
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+
42
+ end
@@ -0,0 +1,36 @@
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+ =begin
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+ #Cheminée
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+
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+ #Cheminée: The Chemical Structure Search Engine
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+
6
+ The version of the OpenAPI document: 1.0
7
+
8
+ Generated by: https://openapi-generator.tech
9
+ OpenAPI Generator version: 7.1.0-SNAPSHOT
10
+
11
+ =end
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+
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+ require 'spec_helper'
14
+ require 'json'
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+ require 'date'
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+
17
+ # Unit tests for Cheminee::BulkRequest
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+ # Automatically generated by openapi-generator (https://openapi-generator.tech)
19
+ # Please update as you see appropriate
20
+ describe Cheminee::BulkRequest do
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+ let(:instance) { Cheminee::BulkRequest.new }
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+
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+ describe 'test an instance of BulkRequest' do
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+ it 'should create an instance of BulkRequest' do
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+ # uncomment below to test the instance creation
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+ #expect(instance).to be_instance_of(Cheminee::BulkRequest)
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+ end
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+ end
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+
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+ describe 'test attribute "docs"' do
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+ it 'should work' do
32
+ # assertion here. ref: https://rspec.info/features/3-12/rspec-expectations/built-in-matchers/
33
+ end
34
+ end
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+
36
+ end
@@ -0,0 +1,36 @@
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+ =begin
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+ #Cheminée
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+
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+ #Cheminée: The Chemical Structure Search Engine
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+
6
+ The version of the OpenAPI document: 1.0
7
+
8
+ Generated by: https://openapi-generator.tech
9
+ OpenAPI Generator version: 7.1.0-SNAPSHOT
10
+
11
+ =end
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+
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+ require 'spec_helper'
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+ require 'json'
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+ require 'date'
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+
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+ # Unit tests for Cheminee::PostIndexBulkResponseError
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+ # Automatically generated by openapi-generator (https://openapi-generator.tech)
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+ # Please update as you see appropriate
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+ describe Cheminee::PostIndexBulkResponseError do
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+ let(:instance) { Cheminee::PostIndexBulkResponseError.new }
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+
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+ describe 'test an instance of PostIndexBulkResponseError' do
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+ it 'should create an instance of PostIndexBulkResponseError' do
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+ # uncomment below to test the instance creation
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+ #expect(instance).to be_instance_of(Cheminee::PostIndexBulkResponseError)
27
+ end
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+ end
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+
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+ describe 'test attribute "error"' do
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+ it 'should work' do
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+ # assertion here. ref: https://rspec.info/features/3-12/rspec-expectations/built-in-matchers/
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+ end
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+ end
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+
36
+ end
@@ -0,0 +1,36 @@
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+ =begin
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+ #Cheminée
3
+
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+ #Cheminée: The Chemical Structure Search Engine
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+
6
+ The version of the OpenAPI document: 1.0
7
+
8
+ Generated by: https://openapi-generator.tech
9
+ OpenAPI Generator version: 7.1.0-SNAPSHOT
10
+
11
+ =end
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+
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+ require 'spec_helper'
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+ require 'json'
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+ require 'date'
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+
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+ # Unit tests for Cheminee::PostIndexBulkResponseOk
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+ # Automatically generated by openapi-generator (https://openapi-generator.tech)
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+ # Please update as you see appropriate
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+ describe Cheminee::PostIndexBulkResponseOk do
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+ let(:instance) { Cheminee::PostIndexBulkResponseOk.new }
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+
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+ describe 'test an instance of PostIndexBulkResponseOk' do
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+ it 'should create an instance of PostIndexBulkResponseOk' do
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+ # uncomment below to test the instance creation
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+ #expect(instance).to be_instance_of(Cheminee::PostIndexBulkResponseOk)
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+ end
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+ end
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+
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+ describe 'test attribute "statuses"' do
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+ it 'should work' do
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+ # assertion here. ref: https://rspec.info/features/3-12/rspec-expectations/built-in-matchers/
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+ end
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+ end
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+
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+ end
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+ =begin
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+ #Cheminée
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+
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+ #Cheminée: The Chemical Structure Search Engine
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+
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+ The version of the OpenAPI document: 1.0
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+
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+ Generated by: https://openapi-generator.tech
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+ OpenAPI Generator version: 7.1.0-SNAPSHOT
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+
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+ =end
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+
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+ require 'spec_helper'
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+ require 'json'
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+ require 'date'
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+
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+ # Unit tests for Cheminee::PostIndexBulkResponseOkStatus
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+ # Automatically generated by openapi-generator (https://openapi-generator.tech)
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+ # Please update as you see appropriate
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+ describe Cheminee::PostIndexBulkResponseOkStatus do
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+ let(:instance) { Cheminee::PostIndexBulkResponseOkStatus.new }
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+
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+ describe 'test an instance of PostIndexBulkResponseOkStatus' do
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+ it 'should create an instance of PostIndexBulkResponseOkStatus' do
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+ # uncomment below to test the instance creation
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+ #expect(instance).to be_instance_of(Cheminee::PostIndexBulkResponseOkStatus)
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+ end
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+ end
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+
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+ describe 'test attribute "opcode"' do
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+ it 'should work' do
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+ # assertion here. ref: https://rspec.info/features/3-12/rspec-expectations/built-in-matchers/
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+ end
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+ end
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+
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+ describe 'test attribute "error"' do
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+ it 'should work' do
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+ # assertion here. ref: https://rspec.info/features/3-12/rspec-expectations/built-in-matchers/
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+ end
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+ end
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+
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+ end