cheminee 0.1.19 → 0.1.22

checksums.yaml

@@ -1,7 +1,7 @@
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-  data.tar.gz: 0bf6ff8c2987e5b0e2dc6edbf24e97bcda1345a9823d2e0bc261bd30c9d7de16
+  metadata.gz: fd0fd97ae51080c209966e664af3d010b5039209f090bb675ed8c8fabb9b54cd
+  data.tar.gz: 0b64fcebc54a5a300b823e15c5a5675579ba82f413d45f45829878ca8d86f61d
 SHA512:
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+  metadata.gz: 2d19c6eb9230b6636e5744bddc2bc070687fa9f6d6cadf5434770b8ba7d9ebda7c364353c58bc6a378077b09679bc7db0935f0b1650e7e64ea72ec592139bfc2
+  data.tar.gz: 6b4108795132e7b21cd6f9e4bd2f46933cb7fc6935043b2c0f95b9b24ee7a0f0673266e341804160789dc3d154b86c7cace186bb6b4ac8bf6f6e7f6cefb09e87

data/Gemfile.lock

@@ -1,7 +1,7 @@
 PATH
   remote: .
   specs:
-    cheminee (0.1.19)
+    cheminee (0.1.22)
       typhoeus (~> 1.0, >= 1.0.1)
 
 GEM
@@ -13,11 +13,11 @@ GEM
     diff-lcs (1.5.1)
     ethon (0.16.0)
       ffi (>= 1.15.0)
-    ffi (1.16.3)
+    ffi (1.17.0-x86_64-linux-gnu)
     jaro_winkler (1.5.6)
-    method_source (1.0.0)
-    parallel (1.24.0)
-    parser (3.3.0.5)
+    method_source (1.1.0)
+    parallel (1.25.1)
+    parser (3.3.4.0)
       ast (~> 2.4.1)
       racc
     pry (0.14.2)
@@ -28,7 +28,7 @@ GEM
       pry (>= 0.13, < 0.15)
     psych (5.1.2)
       stringio
-    racc (1.7.3)
+    racc (1.8.0)
     rainbow (3.1.1)
     rake (13.0.6)
     rspec (3.13.0)
@@ -37,10 +37,10 @@ GEM
       rspec-mocks (~> 3.13.0)
     rspec-core (3.13.0)
       rspec-support (~> 3.13.0)
-    rspec-expectations (3.13.0)
+    rspec-expectations (3.13.1)
       diff-lcs (>= 1.2.0, < 2.0)
       rspec-support (~> 3.13.0)
-    rspec-mocks (3.13.0)
+    rspec-mocks (3.13.1)
       diff-lcs (>= 1.2.0, < 2.0)
       rspec-support (~> 3.13.0)
     rspec-support (3.13.1)
@@ -53,7 +53,7 @@ GEM
       ruby-progressbar (~> 1.7)
       unicode-display_width (>= 1.4.0, < 1.6)
     ruby-progressbar (1.13.0)
-    stringio (3.1.0)
+    stringio (3.1.1)
     typhoeus (1.4.1)
       ethon (>= 0.9.0)
     unicode-display_width (1.5.0)

data/README.md

@@ -7,8 +7,8 @@ Cheminée: The Chemical Structure Search Engine
 This SDK is automatically generated by the [OpenAPI Generator](https://openapi-generator.tech) project:
 
 - API version: 1.0
-- Package version: 0.1.19
-- Generator version: 7.5.0-SNAPSHOT
+- Package version: 0.1.22
+- Generator version: 7.8.0-SNAPSHOT
 - Build package: org.openapitools.codegen.languages.RubyClientCodegen
 For more information, please visit [https://github.com/rdkit-rs/cheminee](https://github.com/rdkit-rs/cheminee)
 
@@ -25,16 +25,16 @@ gem build cheminee.gemspec
 Then either install the gem locally:
 
 ```shell
-gem install ./cheminee-0.1.19.gem
+gem install ./cheminee-0.1.22.gem
 ```
 
-(for development, run `gem install --dev ./cheminee-0.1.19.gem` to install the development dependencies)
+(for development, run `gem install --dev ./cheminee-0.1.22.gem` to install the development dependencies)
 
 or publish the gem to a gem hosting service, e.g. [RubyGems](https://rubygems.org/).
 
 Finally add this to the Gemfile:
 
-    gem 'cheminee', '~> 0.1.19'
+    gem 'cheminee', '~> 0.1.22'
 
 ### Install from Git
 
@@ -84,6 +84,7 @@ Class | Method | HTTP request | Description
 *Cheminee::DefaultApi* | [**v1_indexes_index_get**](docs/DefaultApi.md#v1_indexes_index_get) | **GET** /v1/indexes/{index} | Get extended information about an index
 *Cheminee::DefaultApi* | [**v1_indexes_index_post**](docs/DefaultApi.md#v1_indexes_index_post) | **POST** /v1/indexes/{index} | Create an index
 *Cheminee::DefaultApi* | [**v1_indexes_index_search_basic_get**](docs/DefaultApi.md#v1_indexes_index_search_basic_get) | **GET** /v1/indexes/{index}/search/basic | Perform basic query search against index
+*Cheminee::DefaultApi* | [**v1_indexes_index_search_identity_get**](docs/DefaultApi.md#v1_indexes_index_search_identity_get) | **GET** /v1/indexes/{index}/search/identity | Perform identity search (i.e. exact match) against index
 *Cheminee::DefaultApi* | [**v1_indexes_index_search_substructure_get**](docs/DefaultApi.md#v1_indexes_index_search_substructure_get) | **GET** /v1/indexes/{index}/search/substructure | Perform substructure search against index
 *Cheminee::DefaultApi* | [**v1_schemas_get**](docs/DefaultApi.md#v1_schemas_get) | **GET** /v1/schemas | List schemas available for creating indexes
 *Cheminee::DefaultApi* | [**v1_standardize_post**](docs/DefaultApi.md#v1_standardize_post) | **POST** /v1/standardize | Pass a list of SMILES through fragment_parent, uncharger, and canonicalization routines

data/cheminee.gemspec

@@ -8,7 +8,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/docs/DefaultApi.md

@@ -10,6 +10,7 @@ All URIs are relative to *http://localhost:4001/api*
 | [**v1_indexes_index_get**](DefaultApi.md#v1_indexes_index_get) | **GET** /v1/indexes/{index} | Get extended information about an index |
 | [**v1_indexes_index_post**](DefaultApi.md#v1_indexes_index_post) | **POST** /v1/indexes/{index} | Create an index |
 | [**v1_indexes_index_search_basic_get**](DefaultApi.md#v1_indexes_index_search_basic_get) | **GET** /v1/indexes/{index}/search/basic | Perform basic query search against index |
+| [**v1_indexes_index_search_identity_get**](DefaultApi.md#v1_indexes_index_search_identity_get) | **GET** /v1/indexes/{index}/search/identity | Perform identity search (i.e. exact match) against index |
 | [**v1_indexes_index_search_substructure_get**](DefaultApi.md#v1_indexes_index_search_substructure_get) | **GET** /v1/indexes/{index}/search/substructure | Perform substructure search against index |
 | [**v1_schemas_get**](DefaultApi.md#v1_schemas_get) | **GET** /v1/schemas | List schemas available for creating indexes |
 | [**v1_standardize_post**](DefaultApi.md#v1_standardize_post) | **POST** /v1/standardize | Pass a list of SMILES through fragment_parent, uncharger, and canonicalization routines |
@@ -400,6 +401,76 @@ No authorization required
 - **Accept**: application/json; charset=utf-8
 
 
+## v1_indexes_index_search_identity_get
+
+> <Array<StructureSearchHit>> v1_indexes_index_search_identity_get(index, smiles, opts)
+
+Perform identity search (i.e. exact match) against index
+
+### Examples
+
+```ruby
+require 'time'
+require 'cheminee'
+
+api_instance = Cheminee::DefaultApi.new
+index = 'index_example' # String | 
+smiles = 'smiles_example' # String | 
+opts = {
+  extra_query: 'extra_query_example', # String | 
+  use_scaffolds: 'use_scaffolds_example' # String | 
+}
+
+begin
+  # Perform identity search (i.e. exact match) against index
+  result = api_instance.v1_indexes_index_search_identity_get(index, smiles, opts)
+  p result
+rescue Cheminee::ApiError => e
+  puts "Error when calling DefaultApi->v1_indexes_index_search_identity_get: #{e}"
+end
+```
+
+#### Using the v1_indexes_index_search_identity_get_with_http_info variant
+
+This returns an Array which contains the response data, status code and headers.
+
+> <Array(<Array<StructureSearchHit>>, Integer, Hash)> v1_indexes_index_search_identity_get_with_http_info(index, smiles, opts)
+
+```ruby
+begin
+  # Perform identity search (i.e. exact match) against index
+  data, status_code, headers = api_instance.v1_indexes_index_search_identity_get_with_http_info(index, smiles, opts)
+  p status_code # => 2xx
+  p headers # => { ... }
+  p data # => <Array<StructureSearchHit>>
+rescue Cheminee::ApiError => e
+  puts "Error when calling DefaultApi->v1_indexes_index_search_identity_get_with_http_info: #{e}"
+end
+```
+
+### Parameters
+
+| Name | Type | Description | Notes |
+| ---- | ---- | ----------- | ----- |
+| **index** | **String** |  |  |
+| **smiles** | **String** |  |  |
+| **extra_query** | **String** |  | [optional] |
+| **use_scaffolds** | **String** |  | [optional] |
+
+### Return type
+
+[**Array&lt;StructureSearchHit&gt;**](StructureSearchHit.md)
+
+### Authorization
+
+No authorization required
+
+### HTTP request headers
+
+- **Content-Type**: Not defined
+- **Accept**: application/json; charset=utf-8
+
+
 ## v1_indexes_index_search_substructure_get
 
 > <Array<StructureSearchHit>> v1_indexes_index_search_substructure_get(index, smiles, opts)
@@ -418,7 +489,8 @@ smiles = 'smiles_example' # String |
 opts = {
   result_limit: 56, # Integer | 
   tautomer_limit: 56, # Integer | 
-  extra_query: 'extra_query_example' # String | 
+  extra_query: 'extra_query_example', # String | 
+  use_scaffolds: 'use_scaffolds_example' # String | 
 }
 
 begin
@@ -457,6 +529,7 @@ end
 | **result_limit** | **Integer** |  | [optional] |
 | **tautomer_limit** | **Integer** |  | [optional] |
 | **extra_query** | **String** |  | [optional] |
+| **use_scaffolds** | **String** |  | [optional] |
 
 ### Return type
 

data/docs/QuerySearchHit.md

@@ -4,7 +4,7 @@
 
 | Name | Type | Description | Notes |
 | ---- | ---- | ----------- | ----- |
-| **extra_data** | **Object** |  |  |
+| **extra_data** | **String** |  |  |
 | **smiles** | **String** |  |  |
 | **query** | **String** |  |  |
 

data/docs/StructureSearchHit.md

@@ -4,7 +4,7 @@
 
 | Name | Type | Description | Notes |
 | ---- | ---- | ----------- | ----- |
-| **extra_data** | **Object** |  |  |
+| **extra_data** | **String** |  |  |
 | **smiles** | **String** |  |  |
 | **score** | **Float** |  |  |
 | **query** | **String** |  |  |

data/lib/cheminee/api/default_api.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 
@@ -56,7 +56,7 @@ module Cheminee
       # header parameters
       header_params = opts[:header_params] || {}
       # HTTP header 'Accept' (if needed)
-      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8'])
+      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8']) unless header_params['Accept']
       # HTTP header 'Content-Type'
       content_type = @api_client.select_header_content_type(['application/json; charset=utf-8'])
       if !content_type.nil?
@@ -116,7 +116,7 @@ module Cheminee
       # header parameters
       header_params = opts[:header_params] || {}
       # HTTP header 'Accept' (if needed)
-      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8'])
+      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8']) unless header_params['Accept']
 
       # form parameters
       form_params = opts[:form_params] || {}
@@ -183,7 +183,7 @@ module Cheminee
       # header parameters
       header_params = opts[:header_params] || {}
       # HTTP header 'Accept' (if needed)
-      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8'])
+      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8']) unless header_params['Accept']
       # HTTP header 'Content-Type'
       content_type = @api_client.select_header_content_type(['application/json; charset=utf-8'])
       if !content_type.nil?
@@ -249,7 +249,7 @@ module Cheminee
       # header parameters
       header_params = opts[:header_params] || {}
       # HTTP header 'Accept' (if needed)
-      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8'])
+      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8']) unless header_params['Accept']
 
       # form parameters
       form_params = opts[:form_params] || {}
@@ -320,7 +320,7 @@ module Cheminee
       # header parameters
       header_params = opts[:header_params] || {}
       # HTTP header 'Accept' (if needed)
-      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8'])
+      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8']) unless header_params['Accept']
 
       # form parameters
       form_params = opts[:form_params] || {}
@@ -391,7 +391,7 @@ module Cheminee
       # header parameters
       header_params = opts[:header_params] || {}
       # HTTP header 'Accept' (if needed)
-      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8'])
+      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8']) unless header_params['Accept']
 
       # form parameters
       form_params = opts[:form_params] || {}
@@ -422,6 +422,80 @@ module Cheminee
       return data, status_code, headers
     end
 
+    # Perform identity search (i.e. exact match) against index
+    # @param index [String] 
+    # @param smiles [String] 
+    # @param [Hash] opts the optional parameters
+    # @option opts [String] :extra_query 
+    # @option opts [String] :use_scaffolds 
+    # @return [Array<StructureSearchHit>]
+    def v1_indexes_index_search_identity_get(index, smiles, opts = {})
+      data, _status_code, _headers = v1_indexes_index_search_identity_get_with_http_info(index, smiles, opts)
+      data
+    end
+
+    # Perform identity search (i.e. exact match) against index
+    # @param index [String] 
+    # @param smiles [String] 
+    # @param [Hash] opts the optional parameters
+    # @option opts [String] :extra_query 
+    # @option opts [String] :use_scaffolds 
+    # @return [Array<(Array<StructureSearchHit>, Integer, Hash)>] Array<StructureSearchHit> data, response status code and response headers
+    def v1_indexes_index_search_identity_get_with_http_info(index, smiles, opts = {})
+      if @api_client.config.debugging
+        @api_client.config.logger.debug 'Calling API: DefaultApi.v1_indexes_index_search_identity_get ...'
+      end
+      # verify the required parameter 'index' is set
+      if @api_client.config.client_side_validation && index.nil?
+        fail ArgumentError, "Missing the required parameter 'index' when calling DefaultApi.v1_indexes_index_search_identity_get"
+      end
+      # verify the required parameter 'smiles' is set
+      if @api_client.config.client_side_validation && smiles.nil?
+        fail ArgumentError, "Missing the required parameter 'smiles' when calling DefaultApi.v1_indexes_index_search_identity_get"
+      end
+      # resource path
+      local_var_path = '/v1/indexes/{index}/search/identity'.sub('{' + 'index' + '}', CGI.escape(index.to_s))
+
+      # query parameters
+      query_params = opts[:query_params] || {}
+      query_params[:'smiles'] = smiles
+      query_params[:'extra_query'] = opts[:'extra_query'] if !opts[:'extra_query'].nil?
+      query_params[:'use_scaffolds'] = opts[:'use_scaffolds'] if !opts[:'use_scaffolds'].nil?
+
+      # header parameters
+      header_params = opts[:header_params] || {}
+      # HTTP header 'Accept' (if needed)
+      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8']) unless header_params['Accept']
+
+      # form parameters
+      form_params = opts[:form_params] || {}
+
+      # http body (model)
+      post_body = opts[:debug_body]
+
+      # return_type
+      return_type = opts[:debug_return_type] || 'Array<StructureSearchHit>'
+
+      # auth_names
+      auth_names = opts[:debug_auth_names] || []
+
+      new_options = opts.merge(
+        :operation => :"DefaultApi.v1_indexes_index_search_identity_get",
+        :header_params => header_params,
+        :query_params => query_params,
+        :form_params => form_params,
+        :body => post_body,
+        :auth_names => auth_names,
+        :return_type => return_type
+      )
+
+      data, status_code, headers = @api_client.call_api(:GET, local_var_path, new_options)
+      if @api_client.config.debugging
+        @api_client.config.logger.debug "API called: DefaultApi#v1_indexes_index_search_identity_get\nData: #{data.inspect}\nStatus code: #{status_code}\nHeaders: #{headers}"
+      end
+      return data, status_code, headers
+    end
+
     # Perform substructure search against index
     # @param index [String] 
     # @param smiles [String] 
@@ -429,6 +503,7 @@ module Cheminee
     # @option opts [Integer] :result_limit 
     # @option opts [Integer] :tautomer_limit 
     # @option opts [String] :extra_query 
+    # @option opts [String] :use_scaffolds 
     # @return [Array<StructureSearchHit>]
     def v1_indexes_index_search_substructure_get(index, smiles, opts = {})
       data, _status_code, _headers = v1_indexes_index_search_substructure_get_with_http_info(index, smiles, opts)
@@ -442,6 +517,7 @@ module Cheminee
     # @option opts [Integer] :result_limit 
     # @option opts [Integer] :tautomer_limit 
     # @option opts [String] :extra_query 
+    # @option opts [String] :use_scaffolds 
     # @return [Array<(Array<StructureSearchHit>, Integer, Hash)>] Array<StructureSearchHit> data, response status code and response headers
     def v1_indexes_index_search_substructure_get_with_http_info(index, smiles, opts = {})
       if @api_client.config.debugging
@@ -464,11 +540,12 @@ module Cheminee
       query_params[:'result_limit'] = opts[:'result_limit'] if !opts[:'result_limit'].nil?
       query_params[:'tautomer_limit'] = opts[:'tautomer_limit'] if !opts[:'tautomer_limit'].nil?
       query_params[:'extra_query'] = opts[:'extra_query'] if !opts[:'extra_query'].nil?
+      query_params[:'use_scaffolds'] = opts[:'use_scaffolds'] if !opts[:'use_scaffolds'].nil?
 
       # header parameters
       header_params = opts[:header_params] || {}
       # HTTP header 'Accept' (if needed)
-      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8'])
+      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8']) unless header_params['Accept']
 
       # form parameters
       form_params = opts[:form_params] || {}
@@ -523,7 +600,7 @@ module Cheminee
       # header parameters
       header_params = opts[:header_params] || {}
       # HTTP header 'Accept' (if needed)
-      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8'])
+      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8']) unless header_params['Accept']
 
       # form parameters
       form_params = opts[:form_params] || {}
@@ -587,7 +664,7 @@ module Cheminee
       # header parameters
       header_params = opts[:header_params] || {}
       # HTTP header 'Accept' (if needed)
-      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8'])
+      header_params['Accept'] = @api_client.select_header_accept(['application/json; charset=utf-8']) unless header_params['Accept']
       # HTTP header 'Content-Type'
       content_type = @api_client.select_header_content_type(['application/json; charset=utf-8'])
       if !content_type.nil?

data/lib/cheminee/api_client.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 
@@ -211,7 +211,7 @@ module Cheminee
     # @param [String] mime MIME
     # @return [Boolean] True if the MIME is application/json
     def json_mime?(mime)
-      (mime == '*/*') || !(mime =~ /Application\/.*json(?!p)(;.*)?/i).nil?
+      (mime == '*/*') || !(mime =~ /^Application\/.*json(?!p)(;.*)?/i).nil?
     end
 
     # Deserialize the response to the given return type.
@@ -290,7 +290,7 @@ module Cheminee
     # @param [String] filename the filename to be sanitized
     # @return [String] the sanitized filename
     def sanitize_filename(filename)
-      filename.gsub(/.*[\/\\]/, '')
+      filename.split(/[\/\\]/).last
     end
 
     def build_request_url(path, opts = {})

data/lib/cheminee/api_error.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/configuration.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 
@@ -79,6 +79,14 @@ module Cheminee
     # @return [true, false]
     attr_accessor :debugging
 
+    # Set this to ignore operation servers for the API client. This is useful when you need to
+    # send requests to a different server than the one specified in the OpenAPI document.
+    # Will default to the base url defined in the spec but can be overridden by setting
+    # `scheme`, `host`, `base_path` directly.
+    # Default to false.
+    # @return [true, false]
+    attr_accessor :ignore_operation_servers
+
     # Defines the logger used for debugging.
     # Default to `Rails.logger` (when in Rails) or logging to STDOUT.
     #
@@ -166,6 +174,7 @@ module Cheminee
       @timeout = 0
       @params_encoding = nil
       @debugging = false
+      @ignore_operation_servers = false
       @inject_format = false
       @force_ending_format = false
       @logger = defined?(Rails) ? Rails.logger : Logger.new(STDOUT)
@@ -200,6 +209,7 @@ module Cheminee
 
     # Returns base URL for specified operation based on server settings
     def base_url(operation = nil)
+      return "#{scheme}://#{[host, base_path].join('/').gsub(/\/+/, '/')}".sub(/\/+\z/, '') if ignore_operation_servers
       if operation_server_settings.key?(operation) then
         index = server_operation_index.fetch(operation, server_index)
         server_url(index.nil? ? 0 : index, server_operation_variables.fetch(operation, server_variables), operation_server_settings[operation])

data/lib/cheminee/models/bulk_request.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/bulk_request_doc.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/converted_smiles.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/create_index_error.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/get_indexes_response_error.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/index_meta.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/index_schema.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/list_index_response_err.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/mol_block.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/post_index_bulk_response_error.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/post_index_bulk_response_ok.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/post_index_bulk_response_ok_status.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/query_response_error.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/query_search_hit.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 
@@ -38,7 +38,7 @@ module Cheminee
     # Attribute type mapping.
     def self.openapi_types
       {
-        :'extra_data' => :'Object',
+        :'extra_data' => :'String',
         :'smiles' => :'String',
         :'query' => :'String'
       }
@@ -47,7 +47,6 @@ module Cheminee
     # List of attributes with nullable: true
     def self.openapi_nullable
       Set.new([
-        :'extra_data',
       ])
     end
 
@@ -90,6 +89,10 @@ module Cheminee
     def list_invalid_properties
       warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
       invalid_properties = Array.new
+      if @extra_data.nil?
+        invalid_properties.push('invalid value for "extra_data", extra_data cannot be nil.')
+      end
+
       if @smiles.nil?
         invalid_properties.push('invalid value for "smiles", smiles cannot be nil.')
       end
@@ -105,6 +108,7 @@ module Cheminee
     # @return true if the model is valid
     def valid?
       warn '[DEPRECATED] the `valid?` method is obsolete'
+      return false if @extra_data.nil?
       return false if @smiles.nil?
       return false if @query.nil?
       true

data/lib/cheminee/models/schema.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/smiles.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/standardized_smiles.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/structure_response_error.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/lib/cheminee/models/structure_search_hit.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 
@@ -44,7 +44,7 @@ module Cheminee
     # Attribute type mapping.
     def self.openapi_types
       {
-        :'extra_data' => :'Object',
+        :'extra_data' => :'String',
         :'smiles' => :'String',
         :'score' => :'Float',
         :'query' => :'String',
@@ -55,7 +55,6 @@ module Cheminee
     # List of attributes with nullable: true
     def self.openapi_nullable
       Set.new([
-        :'extra_data',
       ])
     end
 
@@ -110,6 +109,10 @@ module Cheminee
     def list_invalid_properties
       warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
       invalid_properties = Array.new
+      if @extra_data.nil?
+        invalid_properties.push('invalid value for "extra_data", extra_data cannot be nil.')
+      end
+
       if @smiles.nil?
         invalid_properties.push('invalid value for "smiles", smiles cannot be nil.')
       end
@@ -133,6 +136,7 @@ module Cheminee
     # @return true if the model is valid
     def valid?
       warn '[DEPRECATED] the `valid?` method is obsolete'
+      return false if @extra_data.nil?
       return false if @smiles.nil?
       return false if @score.nil?
       return false if @query.nil?

data/lib/cheminee/version.rb

@@ -6,10 +6,10 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 
 module Cheminee
-  VERSION = '0.1.19'
+  VERSION = '0.1.22'
 end

data/lib/cheminee.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

data/spec/spec_helper.rb

@@ -6,7 +6,7 @@
 The version of the OpenAPI document: 1.0
 
 Generated by: https://openapi-generator.tech
-Generator version: 7.5.0-SNAPSHOT
+Generator version: 7.8.0-SNAPSHOT
 
 =end
 

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: cheminee
 version: !ruby/object:Gem::Version
-  version: 0.1.19
+  version: 0.1.22
 platform: ruby
 authors:
 - Xavier Lange
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2024-04-02 00:00:00.000000000 Z
+date: 2024-07-11 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: typhoeus
@@ -116,7 +116,7 @@ files:
 - lib/cheminee/version.rb
 - openapi-generator-config.json
 - openapi.json
-- pkg/cheminee-0.1.19.gem
+- pkg/cheminee-0.1.22.gem
 - spec/api/default_api_spec.rb
 - spec/api_client_spec.rb
 - spec/configuration_spec.rb
@@ -170,26 +170,26 @@ test_files:
 - spec/api/default_api_spec.rb
 - spec/api_client_spec.rb
 - spec/configuration_spec.rb
+- spec/models/bulk_request_spec.rb
+- spec/models/query_search_hit_spec.rb
+- spec/models/index_schema_spec.rb
+- spec/models/index_meta_spec.rb
+- spec/models/post_index_bulk_response_ok_status_spec.rb
+- spec/models/get_indexes_response_error_spec.rb
 - spec/models/post_index_bulk_response_ok_spec.rb
+- spec/models/query_response_error_spec.rb
 - spec/models/post_index_bulk_response_error_spec.rb
+- spec/models/smiles_spec.rb
 - spec/models/standardized_smile_spec.rb
-- spec/models/smile_spec.rb
-- spec/models/structure_response_error_spec.rb
+- spec/models/bulk_request_doc_spec.rb
 - spec/models/converted_smiles_spec.rb
-- spec/models/index_schema_spec.rb
-- spec/models/get_indexes_response_error_spec.rb
-- spec/models/query_search_hit_spec.rb
-- spec/models/bulk_request_spec.rb
-- spec/models/query_response_error_spec.rb
+- spec/models/standardized_smiles_spec.rb
+- spec/models/schema_spec.rb
+- spec/models/smile_spec.rb
+- spec/models/create_index_error_spec.rb
 - spec/models/substructure_search_hit_spec.rb
 - spec/models/mol_block_spec.rb
-- spec/models/bulk_request_doc_spec.rb
-- spec/models/post_index_bulk_response_ok_status_spec.rb
-- spec/models/smiles_spec.rb
-- spec/models/schema_spec.rb
 - spec/models/structure_search_hit_spec.rb
-- spec/models/standardized_smiles_spec.rb
+- spec/models/structure_response_error_spec.rb
 - spec/models/list_index_response_err_spec.rb
-- spec/models/index_meta_spec.rb
-- spec/models/create_index_error_spec.rb
 - spec/spec_helper.rb