cheminee 0.0.15

data/lib/cheminee/configuration.rb

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+=begin
+#Cheminée
+
+#Cheminée: The Chemical Structure Search Engine
+
+The version of the OpenAPI document: 1.0
+
+Generated by: https://openapi-generator.tech
+OpenAPI Generator version: 7.0.0-SNAPSHOT
+
+=end
+
+module Cheminee
+  class Configuration
+    # Defines url scheme
+    attr_accessor :scheme
+
+    # Defines url host
+    attr_accessor :host
+
+    # Defines url base path
+    attr_accessor :base_path
+
+    # Define server configuration index
+    attr_accessor :server_index
+
+    # Define server operation configuration index
+    attr_accessor :server_operation_index
+
+    # Default server variables
+    attr_accessor :server_variables
+
+    # Default server operation variables
+    attr_accessor :server_operation_variables
+
+    # Defines API keys used with API Key authentications.
+    #
+    # @return [Hash] key: parameter name, value: parameter value (API key)
+    #
+    # @example parameter name is "api_key", API key is "xxx" (e.g. "api_key=xxx" in query string)
+    #   config.api_key['api_key'] = 'xxx'
+    attr_accessor :api_key
+
+    # Defines API key prefixes used with API Key authentications.
+    #
+    # @return [Hash] key: parameter name, value: API key prefix
+    #
+    # @example parameter name is "Authorization", API key prefix is "Token" (e.g. "Authorization: Token xxx" in headers)
+    #   config.api_key_prefix['api_key'] = 'Token'
+    attr_accessor :api_key_prefix
+
+    # Defines the username used with HTTP basic authentication.
+    #
+    # @return [String]
+    attr_accessor :username
+
+    # Defines the password used with HTTP basic authentication.
+    #
+    # @return [String]
+    attr_accessor :password
+
+    # Defines the access token (Bearer) used with OAuth2.
+    attr_accessor :access_token
+
+    # Defines a Proc used to fetch or refresh access tokens (Bearer) used with OAuth2.
+    # Overrides the access_token if set
+    # @return [Proc]
+    attr_accessor :access_token_getter
+
+    # Set this to return data as binary instead of downloading a temp file. When enabled (set to true)
+    # HTTP responses with return type `File` will be returned as a stream of binary data.
+    # Default to false.
+    attr_accessor :return_binary_data
+
+    # Set this to enable/disable debugging. When enabled (set to true), HTTP request/response
+    # details will be logged with `logger.debug` (see the `logger` attribute).
+    # Default to false.
+    #
+    # @return [true, false]
+    attr_accessor :debugging
+
+    # Defines the logger used for debugging.
+    # Default to `Rails.logger` (when in Rails) or logging to STDOUT.
+    #
+    # @return [#debug]
+    attr_accessor :logger
+
+    # Defines the temporary folder to store downloaded files
+    # (for API endpoints that have file response).
+    # Default to use `Tempfile`.
+    #
+    # @return [String]
+    attr_accessor :temp_folder_path
+
+    # The time limit for HTTP request in seconds.
+    # Default to 0 (never times out).
+    attr_accessor :timeout
+
+    # Set this to false to skip client side validation in the operation.
+    # Default to true.
+    # @return [true, false]
+    attr_accessor :client_side_validation
+
+    ### TLS/SSL setting
+    # Set this to false to skip verifying SSL certificate when calling API from https server.
+    # Default to true.
+    #
+    # @note Do NOT set it to false in production code, otherwise you would face multiple types of cryptographic attacks.
+    #
+    # @return [true, false]
+    attr_accessor :verify_ssl
+
+    ### TLS/SSL setting
+    # Set this to false to skip verifying SSL host name
+    # Default to true.
+    #
+    # @note Do NOT set it to false in production code, otherwise you would face multiple types of cryptographic attacks.
+    #
+    # @return [true, false]
+    attr_accessor :verify_ssl_host
+
+    ### TLS/SSL setting
+    # Set this to customize the certificate file to verify the peer.
+    #
+    # @return [String] the path to the certificate file
+    #
+    # @see The `cainfo` option of Typhoeus, `--cert` option of libcurl. Related source code:
+    # https://github.com/typhoeus/typhoeus/blob/master/lib/typhoeus/easy_factory.rb#L145
+    attr_accessor :ssl_ca_cert
+
+    ### TLS/SSL setting
+    # Client certificate file (for client certificate)
+    attr_accessor :cert_file
+
+    ### TLS/SSL setting
+    # Client private key file (for client certificate)
+    attr_accessor :key_file
+
+    # Set this to customize parameters encoding of array parameter with multi collectionFormat.
+    # Default to nil.
+    #
+    # @see The params_encoding option of Ethon. Related source code:
+    # https://github.com/typhoeus/ethon/blob/master/lib/ethon/easy/queryable.rb#L96
+    attr_accessor :params_encoding
+
+
+    attr_accessor :inject_format
+
+    attr_accessor :force_ending_format
+
+    def initialize
+      @scheme = 'http'
+      @host = 'localhost:3000'
+      @base_path = '/api/v1'
+      @server_index = nil
+      @server_operation_index = {}
+      @server_variables = {}
+      @server_operation_variables = {}
+      @api_key = {}
+      @api_key_prefix = {}
+      @client_side_validation = true
+      @verify_ssl = true
+      @verify_ssl_host = true
+      @cert_file = nil
+      @key_file = nil
+      @timeout = 0
+      @params_encoding = nil
+      @debugging = false
+      @inject_format = false
+      @force_ending_format = false
+      @logger = defined?(Rails) ? Rails.logger : Logger.new(STDOUT)
+
+      yield(self) if block_given?
+    end
+
+    # The default Configuration object.
+    def self.default
+      @@default ||= Configuration.new
+    end
+
+    def configure
+      yield(self) if block_given?
+    end
+
+    def scheme=(scheme)
+      # remove :// from scheme
+      @scheme = scheme.sub(/:\/\//, '')
+    end
+
+    def host=(host)
+      # remove http(s):// and anything after a slash
+      @host = host.sub(/https?:\/\//, '').split('/').first
+    end
+
+    def base_path=(base_path)
+      # Add leading and trailing slashes to base_path
+      @base_path = "/#{base_path}".gsub(/\/+/, '/')
+      @base_path = '' if @base_path == '/'
+    end
+
+    # Returns base URL for specified operation based on server settings
+    def base_url(operation = nil)
+      if operation_server_settings.key?(operation) then
+        index = server_operation_index.fetch(operation, server_index)
+        server_url(index.nil? ? 0 : index, server_operation_variables.fetch(operation, server_variables), operation_server_settings[operation])
+      else
+        server_index.nil? ? "#{scheme}://#{[host, base_path].join('/').gsub(/\/+/, '/')}".sub(/\/+\z/, '') : server_url(server_index, server_variables, nil)
+      end
+    end
+
+    # Gets API key (with prefix if set).
+    # @param [String] param_name the parameter name of API key auth
+    def api_key_with_prefix(param_name, param_alias = nil)
+      key = @api_key[param_name]
+      key = @api_key.fetch(param_alias, key) unless param_alias.nil?
+      if @api_key_prefix[param_name]
+        "#{@api_key_prefix[param_name]} #{key}"
+      else
+        key
+      end
+    end
+
+    # Gets access_token using access_token_getter or uses the static access_token
+    def access_token_with_refresh
+        return access_token if access_token_getter.nil?
+        access_token_getter.call
+    end
+
+    # Gets Basic Auth token string
+    def basic_auth_token
+      'Basic ' + ["#{username}:#{password}"].pack('m').delete("\r\n")
+    end
+
+    # Returns Auth Settings hash for api client.
+    def auth_settings
+      {
+      }
+    end
+
+    # Returns an array of Server setting
+    def server_settings
+      [
+        {
+          url: "http://localhost:3000/api/v1",
+          description: "No description provided",
+        }
+      ]
+    end
+
+    def operation_server_settings
+      {
+      }
+    end
+
+    # Returns URL based on server settings
+    #
+    # @param index array index of the server settings
+    # @param variables hash of variable and the corresponding value
+    def server_url(index, variables = {}, servers = nil)
+      servers = server_settings if servers == nil
+
+      # check array index out of bound
+      if (index.nil? || index < 0 || index >= servers.size)
+        fail ArgumentError, "Invalid index #{index} when selecting the server. Must not be nil and must be less than #{servers.size}"
+      end
+
+      server = servers[index]
+      url = server[:url]
+
+      return url unless server.key? :variables
+
+      # go through variable and assign a value
+      server[:variables].each do |name, variable|
+        if variables.key?(name)
+          if (!server[:variables][name].key?(:enum_values) || server[:variables][name][:enum_values].include?(variables[name]))
+            url.gsub! "{" + name.to_s + "}", variables[name]
+          else
+            fail ArgumentError, "The variable `#{name}` in the server URL has invalid value #{variables[name]}. Must be #{server[:variables][name][:enum_values]}."
+          end
+        else
+          # use default value
+          url.gsub! "{" + name.to_s + "}", server[:variables][name][:default_value]
+        end
+      end
+
+      url
+    end
+
+  end
+end

data/lib/cheminee/models/smile.rb

@@ -0,0 +1,221 @@
+=begin
+#Cheminée
+
+#Cheminée: The Chemical Structure Search Engine
+
+The version of the OpenAPI document: 1.0
+
+Generated by: https://openapi-generator.tech
+OpenAPI Generator version: 7.0.0-SNAPSHOT
+
+=end
+
+require 'date'
+require 'time'
+
+module Cheminee
+  class Smile
+    attr_accessor :smile
+
+    # Attribute mapping from ruby-style variable name to JSON key.
+    def self.attribute_map
+      {
+        :'smile' => :'smile'
+      }
+    end
+
+    # Returns all the JSON keys this model knows about
+    def self.acceptable_attributes
+      attribute_map.values
+    end
+
+    # Attribute type mapping.
+    def self.openapi_types
+      {
+        :'smile' => :'String'
+      }
+    end
+
+    # List of attributes with nullable: true
+    def self.openapi_nullable
+      Set.new([
+      ])
+    end
+
+    # Initializes the object
+    # @param [Hash] attributes Model attributes in the form of hash
+    def initialize(attributes = {})
+      if (!attributes.is_a?(Hash))
+        fail ArgumentError, "The input argument (attributes) must be a hash in `Cheminee::Smile` initialize method"
+      end
+
+      # check to see if the attribute exists and convert string to symbol for hash key
+      attributes = attributes.each_with_object({}) { |(k, v), h|
+        if (!self.class.attribute_map.key?(k.to_sym))
+          fail ArgumentError, "`#{k}` is not a valid attribute in `Cheminee::Smile`. Please check the name to make sure it's valid. List of attributes: " + self.class.attribute_map.keys.inspect
+        end
+        h[k.to_sym] = v
+      }
+
+      if attributes.key?(:'smile')
+        self.smile = attributes[:'smile']
+      else
+        self.smile = nil
+      end
+    end
+
+    # Show invalid properties with the reasons. Usually used together with valid?
+    # @return Array for valid properties with the reasons
+    def list_invalid_properties
+      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
+      invalid_properties = Array.new
+      if @smile.nil?
+        invalid_properties.push('invalid value for "smile", smile cannot be nil.')
+      end
+
+      invalid_properties
+    end
+
+    # Check to see if the all the properties in the model are valid
+    # @return true if the model is valid
+    def valid?
+      warn '[DEPRECATED] the `valid?` method is obsolete'
+      return false if @smile.nil?
+      true
+    end
+
+    # Checks equality by comparing each attribute.
+    # @param [Object] Object to be compared
+    def ==(o)
+      return true if self.equal?(o)
+      self.class == o.class &&
+          smile == o.smile
+    end
+
+    # @see the `==` method
+    # @param [Object] Object to be compared
+    def eql?(o)
+      self == o
+    end
+
+    # Calculates hash code according to all attributes.
+    # @return [Integer] Hash code
+    def hash
+      [smile].hash
+    end
+
+    # Builds the object from hash
+    # @param [Hash] attributes Model attributes in the form of hash
+    # @return [Object] Returns the model itself
+    def self.build_from_hash(attributes)
+      return nil unless attributes.is_a?(Hash)
+      attributes = attributes.transform_keys(&:to_sym)
+      transformed_hash = {}
+      openapi_types.each_pair do |key, type|
+        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
+          transformed_hash["#{key}"] = nil
+        elsif type =~ /\AArray<(.*)>/i
+          # check to ensure the input is an array given that the attribute
+          # is documented as an array but the input is not
+          if attributes[attribute_map[key]].is_a?(Array)
+            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
+          end
+        elsif !attributes[attribute_map[key]].nil?
+          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
+        end
+      end
+      new(transformed_hash)
+    end
+
+    # Deserializes the data based on type
+    # @param string type Data type
+    # @param string value Value to be deserialized
+    # @return [Object] Deserialized data
+    def self._deserialize(type, value)
+      case type.to_sym
+      when :Time
+        Time.parse(value)
+      when :Date
+        Date.parse(value)
+      when :String
+        value.to_s
+      when :Integer
+        value.to_i
+      when :Float
+        value.to_f
+      when :Boolean
+        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
+          true
+        else
+          false
+        end
+      when :Object
+        # generic object (usually a Hash), return directly
+        value
+      when /\AArray<(?<inner_type>.+)>\z/
+        inner_type = Regexp.last_match[:inner_type]
+        value.map { |v| _deserialize(inner_type, v) }
+      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
+        k_type = Regexp.last_match[:k_type]
+        v_type = Regexp.last_match[:v_type]
+        {}.tap do |hash|
+          value.each do |k, v|
+            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
+          end
+        end
+      else # model
+        # models (e.g. Pet) or oneOf
+        klass = Cheminee.const_get(type)
+        klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
+      end
+    end
+
+    # Returns the string representation of the object
+    # @return [String] String presentation of the object
+    def to_s
+      to_hash.to_s
+    end
+
+    # to_body is an alias to to_hash (backward compatibility)
+    # @return [Hash] Returns the object in the form of hash
+    def to_body
+      to_hash
+    end
+
+    # Returns the object in the form of hash
+    # @return [Hash] Returns the object in the form of hash
+    def to_hash
+      hash = {}
+      self.class.attribute_map.each_pair do |attr, param|
+        value = self.send(attr)
+        if value.nil?
+          is_nullable = self.class.openapi_nullable.include?(attr)
+          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
+        end
+
+        hash[param] = _to_hash(value)
+      end
+      hash
+    end
+
+    # Outputs non-array value in the form of hash
+    # For object, use to_hash. Otherwise, just return the value
+    # @param [Object] value Any valid value
+    # @return [Hash] Returns the value in the form of hash
+    def _to_hash(value)
+      if value.is_a?(Array)
+        value.compact.map { |v| _to_hash(v) }
+      elsif value.is_a?(Hash)
+        {}.tap do |hash|
+          value.each { |k, v| hash[k] = _to_hash(v) }
+        end
+      elsif value.respond_to? :to_hash
+        value.to_hash
+      else
+        value
+      end
+    end
+
+  end
+
+end