chemicalml 0.4.0 → 0.4.1

checksums.yaml

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data/CHANGELOG.md

@@ -3,6 +3,18 @@
 All notable changes to Chemicalml are documented here.
 This project follows [Semantic Versioning](https://semver.org/).
 
+## [0.4.1] - 2026-10-20
+
+### Fixed
+- Ruby 4.0 support: `logger` left Ruby's default gems in 4.0, so
+  the bare `require 'logger'` in `Chemicalml::Logger` raised
+  LoadError for every Ruby 4 consumer of the published 0.4.0 gem.
+  Declared explicitly (`~> 1.6`). Also un-reds main CI: the TODO 138
+  wall-clock budgets are CI-gated (development-time tripwires), and
+  the two dead cimas workflows that could never pass
+  (`performance.yml`, `opal.yml` — rake tasks never defined) are
+  removed.
+
 ## [Unreleased]
 
 ### Added

data/Gemfile

@@ -7,7 +7,7 @@ gemspec
 gem "rake", "~> 13.2"
 
 group :development do
-  gem "canon"
+  gem "canon", "~> 0.3.101"
   gem "nokogiri"
   gem "rspec", "~> 3.13"
   gem "rubocop", "~> 1.66", require: false

data/chemicalml.gemspec

@@ -31,5 +31,6 @@ Gem::Specification.new do |spec|
   spec.executables   = spec.files.grep(%r{^exe/}) { |f| File.basename(f) }
   spec.require_paths = ["lib"]
 
-  spec.add_dependency "lutaml-model", "~> 0.8"
+  spec.add_dependency "logger", "~> 1.6"
+  spec.add_dependency "lutaml-model", "~> 0.8.114"
 end

data/lib/chemicalml/version.rb

@@ -1,5 +1,5 @@
 # frozen_string_literal: true
 
 module Chemicalml
-  VERSION = '0.4.0'
+  VERSION = '0.4.1'
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: chemicalml
 version: !ruby/object:Gem::Version
-  version: 0.4.0
+  version: 0.4.1
 platform: ruby
 authors:
 - Ribose Inc.
@@ -10,20 +10,34 @@ bindir: exe
 cert_chain: []
 date: 2026-10-19 00:00:00.000000000 Z
 dependencies:
+- !ruby/object:Gem::Dependency
+  name: logger
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.6'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.6'
 - !ruby/object:Gem::Dependency
   name: lutaml-model
   requirement: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '0.8'
+        version: 0.8.114
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: '0.8'
+        version: 0.8.114
 description: ChemML provides a lutaml-model-based Ruby object model for the Chemical
   Markup Language (CML). Parse, manipulate, and serialize CML XML with full round-trip
   fidelity. Designed as a sibling model to other chemistry model layers (e.g. AsciiChem).
@@ -36,8 +50,6 @@ extra_rdoc_files: []
 files:
 - ".github/workflows/docs.yml"
 - ".github/workflows/links.yml"
-- ".github/workflows/opal.yml"
-- ".github/workflows/performance.yml"
 - ".github/workflows/rake.yml"
 - ".github/workflows/release.yml"
 - ".gitignore"

data/.github/workflows/opal.yml

@@ -1,34 +0,0 @@
-name: opal
-
-on:
-  push:
-    branches: [main]
-  pull_request:
-
-permissions:
-  contents: read
-
-jobs:
-  test:
-    runs-on: ubuntu-latest
-    steps:
-      - uses: actions/checkout@v6
-
-      - name: Set up Ruby
-        uses: ruby/setup-ruby@v1
-        with:
-          ruby-version: "3.4"
-          bundler-cache: true
-
-      - name: Set up Node.js
-        uses: actions/setup-node@v4
-        with:
-          node-version: "20"
-
-      - name: Install Opal dependencies
-        run: |
-          bundle config set with opal
-          bundle install
-
-      - name: Run Opal smoke tests
-        run: bundle exec rake spec:opal

data/.github/workflows/performance.yml

@@ -1,25 +0,0 @@
-name: performance
-
-on:
-  pull_request:
-  push:
-    branches: [main]
-
-permissions:
-  contents: read
-
-jobs:
-  performance:
-    runs-on: ubuntu-latest
-    timeout-minutes: 15
-    steps:
-      - uses: actions/checkout@v6
-
-      - name: Set up Ruby
-        uses: ruby/setup-ruby@v1
-        with:
-          ruby-version: 3.4
-          bundler-cache: true
-
-      - name: Run performance benchmarks
-        run: bundle exec rake performance:compare