caruby-tissue 1.2.3 → 1.3.1

data/conf/annotation/pathology_scg/Details.hbm.xml

@@ -1,14 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="Details" table="DE_E_1458" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="Detail" type="java.lang.String" column="DE_AT_1460" />
-    <many-to-one name="AdditionalFinding" class="pathology_scg.AdditionalFinding" column="DE_E_1454_1456_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/DirectExtensionOfTumor.hbm.xml

@@ -1,14 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="DirectExtensionOfTumor" table="DE_E_1524" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="ExtensionOfTumor" type="java.lang.String" column="DE_AT_1526" />
-    <many-to-one name="LungResectionBasedPathologyAnnotation" class="pathology_scg.LungResectionBasedPathologyAnnotation" column="DE_E_1518_1521_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/DistalMargin.hbm.xml

@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="DistalMargin" table="DE_E_1727" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MarginStatus" type="java.lang.String" column="DE_AT_1730" />
-    <one-to-one name="uninvolvedMargin" class="pathology_scg.ColorectalResectedMarginUninvolved" property-ref="resectionColorectalDistalMargin" />
-    <many-to-one name="resectionBasedColorectalPathologyAnnotation" class="pathology_scg.ResectionBasedColorectalPathologyAnnotation" column="DE_E_1715_1719_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/DistanceFromAnalVerge.hbm.xml

@@ -1,23 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="DistanceFromAnalVerge" table="DE_E_1640" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="LengthInCentimeters" type="java.lang.Long" column="DE_AT_1642" />
-    <property name="DistanceKnown" type="java.lang.Boolean" column="DE_AT_1643" />
-    <many-to-one name="localExcisionBasedColorectalPathologyAnnotation" class="pathology_scg.LocalExcisionBasedColorectalPathologyAnnotation" column="DE_E_1788_1792_IDENTIFIER" unique="true" lazy="proxy" />
-    <joined-subclass name="pathology_scg.DistanceOfAdenoma" table="DE_E_1845" lazy="true">
-      <key column="IDENTIFIER" />
-      <many-to-one name="ExcisionalBiopsyBasedColorectalPathologyAnnotation" class="pathology_scg.ExcisionalBiopsyBasedColorectalPathologyAnnotation" column="DE_E_1631_1844_IDENTIFIER" unique="true" lazy="proxy" />
-    </joined-subclass>
-    <joined-subclass name="pathology_scg.DistanceOfInvasiveCarcinoma" table="DE_E_1847" lazy="true">
-      <key column="IDENTIFIER" />
-      <many-to-one name="ExcisionalBiopsyBasedColorectalPathologyAnnotation" class="pathology_scg.ExcisionalBiopsyBasedColorectalPathologyAnnotation" column="DE_E_1631_1843_IDENTIFIER" unique="true" lazy="proxy" />
-    </joined-subclass>
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/DistantMetastasis.hbm.xml

@@ -1,19 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="DistantMetastasis" table="DE_E_1497" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MetastasisStage" type="java.lang.String" column="DE_AT_1500" />
-    <set name="MetastasisTissueSite" lazy="true" inverse="true">
-      <cache usage="read-write" />
-      <key column="DE_E_1497_1499_IDENTIFIER" />
-      <one-to-many class="pathology_scg.MetastasisTissueSite" />
-    </set>
-    <many-to-one name="pathologicStaging" class="pathology_scg.PathologicalStaging" column="DE_E_1484_1487_IDENTIFIER" unique="true" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/ExcionalBiopsyMarginUninvolved.hbm.xml

@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="ExcionalBiopsyMarginUninvolved" table="DE_E_1612" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="closestDistanceToTumor" type="java.lang.Double" column="DE_AT_1614" />
-    <many-to-one name="ExcisionalBiopsyColorectalDeepMargin" class="pathology_scg.ExcisionalBiopsyColorectalDeepMargin" column="DE_E_1608_1610_IDENTIFIER" unique="true" lazy="proxy" />
-    <many-to-one name="ExcisionalBiopsyColorectalLateralOrMucosalMargin" class="pathology_scg.ExcisionalBiopsyColorectalLateralOrMucosalMargin" column="DE_E_1648_1650_IDENTIFIER" unique="true" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/ExcisionalBiopsyColorectalDeepMargin.hbm.xml

@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="ExcisionalBiopsyColorectalDeepMargin" table="DE_E_1608" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MarginStatus" type="java.lang.String" column="DE_AT_1611" />
-    <one-to-one name="ExcionalBiopsyMarginUninvolved" class="pathology_scg.ExcionalBiopsyMarginUninvolved" property-ref="ExcisionalBiopsyColorectalDeepMargin" />
-    <many-to-one name="excisionalBiopsyBasedColorectalPathologyAnnotation" class="pathology_scg.ExcisionalBiopsyBasedColorectalPathologyAnnotation" column="DE_E_1631_1633_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/ExcisionalBiopsyColorectalLateralOrMucosalMargin.hbm.xml

@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="ExcisionalBiopsyColorectalLateralOrMucosalMargin" table="DE_E_1648" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MarginStatus" type="java.lang.String" column="DE_AT_1651" />
-    <one-to-one name="ExcionalBiopsyMarginUninvolved" class="pathology_scg.ExcionalBiopsyMarginUninvolved" property-ref="ExcisionalBiopsyColorectalLateralOrMucosalMargin" />
-    <many-to-one name="excisionalBiopsyBasedColorectalPathologyAnnotation" class="pathology_scg.ExcisionalBiopsyBasedColorectalPathologyAnnotation" column="DE_E_1631_1634_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/ExtraprostaticExtension.hbm.xml

@@ -1,20 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="ExtraprostaticExtension" table="DE_E_1685" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="IsFocal" type="java.lang.Boolean" column="DE_AT_1688" />
-    <property name="Status" type="java.lang.String" column="DE_AT_1689" />
-    <set name="ExtraprostaticExtensionTissueSites" lazy="true" inverse="true">
-      <cache usage="read-write" />
-      <key column="DE_E_1685_1687_IDENTIFIER" />
-      <one-to-many class="pathology_scg.ExtraprostaticExtensionTissueSites" />
-    </set>
-    <many-to-one name="RadicalProstatectomyPathologyAnnotation" class="pathology_scg.RadicalProstatectomyPathologyAnnotation" column="DE_E_1676_1678_IDENTIFIER" unique="true" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/ExtraprostaticExtensionTissueSites.hbm.xml

@@ -1,14 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="ExtraprostaticExtensionTissueSites" table="DE_E_1690" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="TissueSite" type="java.lang.String" column="DE_AT_1692" />
-    <many-to-one name="ExtraprostaticExtension" class="pathology_scg.ExtraprostaticExtension" column="DE_E_1685_1687_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/GleasonScore.hbm.xml

@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="GleasonScore" table="DE_E_1551" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="TertiaryPatternScore" type="java.lang.String" column="DE_AT_1553" />
-    <property name="SecondaryPatternScore" type="java.lang.String" column="DE_AT_1554" />
-    <property name="PrimaryPatternScore" type="java.lang.String" column="DE_AT_1555" />
-    <many-to-one name="ProstatePathologyAnnotation" class="pathology_scg.ProstatePathologyAnnotation" column="DE_E_1545_1547_IDENTIFIER" unique="true" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/HistologicGrade.hbm.xml

@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="HistologicGrade" table="DE_E_1479" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="Grade" type="java.lang.String" column="DE_AT_1481" />
-    <property name="OtherGradingSystemName" type="java.lang.String" column="DE_AT_1482" />
-    <property name="GradingSystemName" type="java.lang.String" column="DE_AT_1483" />
-    <many-to-one name="BaseSolidTissuePathologyAnnotation" class="pathology_scg.BaseSolidTissuePathologyAnnotation" column="DE_E_1461_1465_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/HistologicType.hbm.xml

@@ -1,19 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="HistologicType" table="DE_E_1447" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="Type" type="java.lang.String" column="DE_AT_1450" />
-    <many-to-one name="BasePathologyAnnotation" class="pathology_scg.BasePathologyAnnotation" column="DE_E_1440_1443_IDENTIFIER" lazy="proxy" />
-    <set name="HistologicVariantType" lazy="true" inverse="true">
-      <cache usage="read-write" />
-      <key column="DE_E_1447_1449_IDENTIFIER" />
-      <one-to-many class="pathology_scg.HistologicVariantType" />
-    </set>
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/HistologicVariantType.hbm.xml

@@ -1,14 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="HistologicVariantType" table="DE_E_1451" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="OtherHistologicType" type="java.lang.String" column="DE_AT_1453" />
-    <many-to-one name="HistologicType" class="pathology_scg.HistologicType" column="DE_E_1447_1449_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/ImmunoPhenotyping.hbm.xml

@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="ImmunoPhenotyping" table="DE_E_1584" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="Status" type="java.lang.String" column="DE_AT_1586" />
-    <property name="Result" type="java.lang.String" column="DE_AT_1587" />
-    <property name="MethodUsed" type="java.lang.String" column="DE_AT_1588" />
-    <many-to-one name="baseHaematologyPathologyAnnotation" class="pathology_scg.BaseHaematologyPathologyAnnotation" column="DE_E_1577_1580_IDENTIFIER" unique="true" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/Invasion.hbm.xml

@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="Invasion" table="DE_E_1468" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="PerineuralInvasion" type="java.lang.String" column="DE_AT_1470" />
-    <property name="VenousInvasion" type="java.lang.String" column="DE_AT_1471" />
-    <property name="LymphaticInvasion" type="java.lang.String" column="DE_AT_1472" />
-    <many-to-one name="baseSolidTissuePathologyAnnotation" class="pathology_scg.BaseSolidTissuePathologyAnnotation" column="DE_E_1461_1467_IDENTIFIER" unique="true" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/KidneyMarginLocation.hbm.xml

@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="KidneyMarginLocation" table="DE_E_1570" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="OtherLocation" type="java.lang.String" column="DE_AT_1572" />
-    <property name="Location" type="java.lang.String" column="DE_AT_1573" />
-    <many-to-one name="KidneyNephrectomyMargin" class="pathology_scg.KidneyNephrectomyMargin" column="DE_E_1566_1568_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/KidneyNephrectomyMargin.hbm.xml

@@ -1,19 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="KidneyNephrectomyMargin" table="DE_E_1566" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MarginStatus" type="java.lang.String" column="DE_AT_1569" />
-    <many-to-one name="KidneyNephrectomyBasedPathologyAnnotation" class="pathology_scg.KidneyNephrectomyBasedPathologyAnnotation" column="DE_E_1797_1799_IDENTIFIER" unique="true" lazy="proxy" />
-    <set name="KidneyMarginLocation" lazy="true" inverse="true">
-      <cache usage="read-write" />
-      <key column="DE_E_1566_1568_IDENTIFIER" />
-      <one-to-many class="pathology_scg.KidneyMarginLocation" />
-    </set>
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/LateralMelanomaMargin.hbm.xml

@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="LateralMelanomaMargin" table="DE_E_1749" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MarginLocation" type="java.lang.String" column="DE_AT_1752" />
-    <property name="MarginStatus" type="java.lang.String" column="DE_AT_1753" />
-    <one-to-one name="UninvolvedMelanomaMargin" class="pathology_scg.UninvolvedMelanomaMargin" property-ref="LateralMelanomaMargin" />
-    <many-to-one name="melanomaPathologyAnnotation" class="pathology_scg.MelanomaPathologyAnnotation" column="DE_E_1735_1745_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/LocalExcisionColorectalDeepMargin.hbm.xml

@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="LocalExcisionColorectalDeepMargin" table="DE_E_1784" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MarginStatus" type="java.lang.String" column="DE_AT_1787" />
-    <one-to-one name="ColorectalLocalExcisionMarginUninvolved" class="pathology_scg.ColorectalLocalExcisionMarginUninvolved" property-ref="LocalExcisionColorectalDeepMargin" />
-    <many-to-one name="localExcisionBasedColorectalPathologyAnnotation" class="pathology_scg.LocalExcisionBasedColorectalPathologyAnnotation" column="DE_E_1788_1791_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/LocalExcisionColorectalLateralMargin.hbm.xml

@@ -1,20 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="LocalExcisionColorectalLateralMargin" table="DE_E_1765" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MarginLocation" type="java.lang.String" column="DE_AT_1768" />
-    <property name="MarginStatus" type="java.lang.String" column="DE_AT_1769" />
-    <set name="uninvolvedMarginCollection" lazy="true" inverse="true">
-      <cache usage="read-write" />
-      <key column="DE_E_1765_1767_IDENTIFIER" />
-      <one-to-many class="pathology_scg.ColorectalLocalExcisionMarginUninvolved" />
-    </set>
-    <many-to-one name="localExcisionBasedColorectalPathologyAnnotation" class="pathology_scg.LocalExcisionBasedColorectalPathologyAnnotation" column="DE_E_1788_1793_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/LungResectionMargin.hbm.xml

@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="LungResectionMargin" table="DE_E_1527" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="OtherLocation" type="java.lang.String" column="DE_AT_1530" />
-    <property name="MarginLocation" type="java.lang.String" column="DE_AT_1531" />
-    <property name="MarginStatus" type="java.lang.String" column="DE_AT_1532" />
-    <one-to-one name="LungResectionMarginsUninvolved" class="pathology_scg.LungResectionMarginsUninvolved" property-ref="LungResectionMargin" />
-    <many-to-one name="LungResectionBasedPathologyAnnotation" class="pathology_scg.LungResectionBasedPathologyAnnotation" column="DE_E_1518_1520_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/LungResectionMarginsUninvolved.hbm.xml

@@ -1,14 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="LungResectionMarginsUninvolved" table="DE_E_1533" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="ClosestDistanceToTumor" type="java.lang.Double" column="DE_AT_1535" />
-    <many-to-one name="LungResectionMargin" class="pathology_scg.LungResectionMargin" column="DE_E_1527_1529_IDENTIFIER" unique="true" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/MacroscopicExtentOfTumor.hbm.xml

@@ -1,14 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="MacroscopicExtentOfTumor" table="DE_E_1574" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="ExtentOfTumor" type="java.lang.String" column="DE_AT_1576" />
-    <many-to-one name="KidneyNephrectomyBasedPathologyAnnotation" class="pathology_scg.KidneyNephrectomyBasedPathologyAnnotation" column="DE_E_1797_1800_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/MesentricMargin.hbm.xml

@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="MesentricMargin" table="DE_E_1693" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MarginStatus" type="java.lang.String" column="DE_AT_1696" />
-    <one-to-one name="uninvolvedMargin" class="pathology_scg.ColorectalResectedMarginUninvolved" property-ref="resectionColorectalMesentricMargin" />
-    <many-to-one name="ResectionBasedColorectalPathologyAnnotation" class="pathology_scg.ResectionBasedColorectalPathologyAnnotation" column="DE_E_1715_1718_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/MetastasisTissueSite.hbm.xml

@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="MetastasisTissueSite" table="DE_E_1501" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="OtherTissueSite" type="java.lang.String" column="DE_AT_1503" />
-    <property name="TissueSite" type="java.lang.String" column="DE_AT_1504" />
-    <many-to-one name="DistantMetastasis" class="pathology_scg.DistantMetastasis" column="DE_E_1497_1499_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/Microcalcification.hbm.xml

@@ -1,14 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="Microcalcification" table="DE_E_1762" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="Value" type="java.lang.String" column="DE_AT_1764" />
-    <many-to-one name="BreastPathologyAnnotation" class="pathology_scg.BreastPathologyAnnotation" column="DE_E_1754_1756_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/NottinghamHistologicScore.hbm.xml

@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="NottinghamHistologicScore" table="DE_E_1709" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="TotalNottinghamScore" type="java.lang.Long" column="DE_AT_1711" />
-    <property name="MitoticCountScore" type="java.lang.String" column="DE_AT_1712" />
-    <property name="NuclearPleomorphismScore" type="java.lang.String" column="DE_AT_1713" />
-    <property name="TubuleFormationScore" type="java.lang.String" column="DE_AT_1714" />
-    <many-to-one name="BreastPathologyAnnotation" class="pathology_scg.BreastPathologyAnnotation" column="DE_E_1754_1759_IDENTIFIER" unique="true" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/OtherResectedOrgans.hbm.xml

@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="OtherResectedOrgans" table="DE_E_1701" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="OtherOtherOrgansResected" type="java.lang.String" column="DE_AT_1703" />
-    <property name="OtherOrgansResected" type="java.lang.String" column="DE_AT_1704" />
-    <many-to-one name="pancreasePathologyAnnotation" class="pathology_scg.PancreasPathologyAnnotation" column="DE_E_1705_1708_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/PancreasMargin.hbm.xml

@@ -1,20 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="PancreasMargin" table="DE_E_1615" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MarginStatus" type="java.lang.String" column="DE_AT_1619" />
-    <one-to-one name="PancreasMarginUninvolvedByInvasiveCarcinoma" class="pathology_scg.PancreasMarginUninvolvedByInvasiveCarcinoma" property-ref="PancreasMargin" />
-    <set name="PancreasMarginInvolvedByInvasiveCarcinoma" lazy="true" inverse="true">
-      <cache usage="read-write" />
-      <key column="DE_E_1615_1617_IDENTIFIER" />
-      <one-to-many class="pathology_scg.PancreasMarginInvolvedByInvasiveCarcinoma" />
-    </set>
-    <many-to-one name="pancreasePathologyAnnotation" class="pathology_scg.PancreasPathologyAnnotation" column="DE_E_1705_1707_IDENTIFIER" unique="true" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/PancreasMarginInvolvedByInvasiveCarcinoma.hbm.xml

@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="PancreasMarginInvolvedByInvasiveCarcinoma" table="DE_E_1562" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="OtherMarginLocation" type="java.lang.String" column="DE_AT_1564" />
-    <property name="MarginLocation" type="java.lang.String" column="DE_AT_1565" />
-    <many-to-one name="PancreasMargin" class="pathology_scg.PancreasMargin" column="DE_E_1615_1617_IDENTIFIER" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/PancreasMarginUninvolvedByInvasiveCarcinoma.hbm.xml

@@ -1,20 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="PancreasMarginUninvolvedByInvasiveCarcinoma" table="DE_E_1620" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <property name="MarginLocation" type="java.lang.String" column="DE_AT_1623" />
-    <property name="ClosestDistanceToTumor" type="java.lang.Double" column="DE_AT_1624" />
-    <many-to-one name="PancreasMargin" class="pathology_scg.PancreasMargin" column="DE_E_1615_1618_IDENTIFIER" unique="true" lazy="proxy" />
-    <set name="CarcinomaInSituStatus" lazy="true" inverse="true">
-      <cache usage="read-write" />
-      <key column="DE_E_1620_1622_IDENTIFIER" />
-      <one-to-many class="pathology_scg.CarcinomaInSituStatus" />
-    </set>
-  </class>
-</hibernate-mapping>
-

data/conf/annotation/pathology_scg/PathologicalStaging.hbm.xml

@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE hibernate-mapping PUBLIC "-//Hibernate/Hibernate Mapping DTD 3.0//EN" "http://hibernate.sourceforge.net/hibernate-mapping-3.0.dtd">
-
-<hibernate-mapping package="pathology_scg">
-  <class name="PathologicalStaging" table="DE_E_1484" lazy="true" polymorphism="explicit">
-    <cache usage="read-write" />
-    <id name="id" type="java.lang.Long" column="IDENTIFIER">
-      <generator class="assigned" />
-    </id>
-    <one-to-one name="PrimaryTumorStage" class="pathology_scg.PrimaryTumorStage" property-ref="PathologicalStaging" />
-    <one-to-one name="regionalLymphNode" class="pathology_scg.RegionalLymphNode" property-ref="pathologicStaging" />
-    <one-to-one name="distantMetastasis" class="pathology_scg.DistantMetastasis" property-ref="pathologicStaging" />
-    <many-to-one name="baseSolidTissuePathologyAnnotation" class="pathology_scg.BaseSolidTissuePathologyAnnotation" column="DE_E_1461_1464_IDENTIFIER" unique="true" lazy="proxy" />
-  </class>
-</hibernate-mapping>
-