carray 1.4.0 → 1.5.1

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Files changed (126) hide show
  1. checksums.yaml +4 -4
  2. data/LICENSES +22 -0
  3. data/README.md +18 -14
  4. data/Rakefile +1 -1
  5. data/carray.gemspec +5 -13
  6. data/{ca_iter_block.c → ext/ca_iter_block.c} +13 -13
  7. data/{ca_iter_dimension.c → ext/ca_iter_dimension.c} +16 -16
  8. data/{ca_iter_window.c → ext/ca_iter_window.c} +10 -10
  9. data/{ca_obj_array.c → ext/ca_obj_array.c} +60 -55
  10. data/{ca_obj_bitarray.c → ext/ca_obj_bitarray.c} +12 -12
  11. data/{ca_obj_bitfield.c → ext/ca_obj_bitfield.c} +7 -7
  12. data/{ca_obj_block.c → ext/ca_obj_block.c} +42 -42
  13. data/{ca_obj_fake.c → ext/ca_obj_fake.c} +7 -7
  14. data/{ca_obj_farray.c → ext/ca_obj_farray.c} +18 -18
  15. data/{ca_obj_field.c → ext/ca_obj_field.c} +15 -15
  16. data/{ca_obj_grid.c → ext/ca_obj_grid.c} +27 -27
  17. data/{ca_obj_mapping.c → ext/ca_obj_mapping.c} +9 -9
  18. data/{ca_obj_object.c → ext/ca_obj_object.c} +37 -37
  19. data/{ca_obj_reduce.c → ext/ca_obj_reduce.c} +1 -1
  20. data/{ca_obj_refer.c → ext/ca_obj_refer.c} +33 -33
  21. data/{ca_obj_repeat.c → ext/ca_obj_repeat.c} +43 -43
  22. data/{ca_obj_select.c → ext/ca_obj_select.c} +2 -2
  23. data/{ca_obj_shift.c → ext/ca_obj_shift.c} +23 -23
  24. data/{ca_obj_transpose.c → ext/ca_obj_transpose.c} +23 -23
  25. data/{ca_obj_unbound_repeat.c → ext/ca_obj_unbound_repeat.c} +55 -55
  26. data/{ca_obj_window.c → ext/ca_obj_window.c} +26 -26
  27. data/{carray.h → ext/carray.h} +73 -51
  28. data/{carray_access.c → ext/carray_access.c} +83 -83
  29. data/{carray_attribute.c → ext/carray_attribute.c} +12 -12
  30. data/{carray_call_cfunc.c → ext/carray_call_cfunc.c} +0 -0
  31. data/{carray_cast.c → ext/carray_cast.c} +6 -6
  32. data/{carray_cast_func.rb → ext/carray_cast_func.rb} +0 -0
  33. data/{carray_class.c → ext/carray_class.c} +0 -0
  34. data/{carray_conversion.c → ext/carray_conversion.c} +8 -10
  35. data/{carray_copy.c → ext/carray_copy.c} +19 -19
  36. data/{carray_core.c → ext/carray_core.c} +2 -2
  37. data/ext/carray_data_type.c +66 -0
  38. data/{carray_element.c → ext/carray_element.c} +9 -9
  39. data/{carray_generate.c → ext/carray_generate.c} +0 -0
  40. data/{carray_iterator.c → ext/carray_iterator.c} +40 -38
  41. data/{carray_loop.c → ext/carray_loop.c} +24 -24
  42. data/{carray_mask.c → ext/carray_mask.c} +17 -6
  43. data/{carray_math.rb → ext/carray_math.rb} +3 -3
  44. data/ext/{mathfunc/carray_mathfunc.c → carray_mathfunc.c} +0 -0
  45. data/{carray_numeric.c → ext/carray_numeric.c} +1 -1
  46. data/{carray_operator.c → ext/carray_operator.c} +9 -9
  47. data/{carray_order.c → ext/carray_order.c} +2 -153
  48. data/{carray_sort_addr.c → ext/carray_sort_addr.c} +0 -0
  49. data/{carray_stat.c → ext/carray_stat.c} +5 -5
  50. data/{carray_stat_proc.rb → ext/carray_stat_proc.rb} +23 -23
  51. data/{carray_test.c → ext/carray_test.c} +22 -21
  52. data/{carray_undef.c → ext/carray_undef.c} +0 -0
  53. data/{carray_utils.c → ext/carray_utils.c} +0 -0
  54. data/{extconf.rb → ext/extconf.rb} +0 -5
  55. data/{mkmath.rb → ext/mkmath.rb} +0 -0
  56. data/{ruby_carray.c → ext/ruby_carray.c} +9 -2
  57. data/{ruby_ccomplex.c → ext/ruby_ccomplex.c} +0 -0
  58. data/{ruby_float_func.c → ext/ruby_float_func.c} +0 -0
  59. data/{version.h → ext/version.h} +5 -5
  60. data/{version.rb → ext/version.rb} +0 -0
  61. data/lib/carray.rb +48 -37
  62. data/lib/carray/{base/autoload.rb → autoload.rb} +1 -1
  63. data/lib/carray/autoload/autoload_base.rb +1 -1
  64. data/lib/carray/autoload/autoload_gem_numo_narray.rb +4 -3
  65. data/lib/carray/autoload/autoload_gem_random.rb +8 -0
  66. data/lib/carray/basic.rb +193 -0
  67. data/lib/carray/compose.rb +291 -0
  68. data/lib/carray/construct.rb +445 -0
  69. data/lib/carray/convert.rb +115 -0
  70. data/lib/carray/{base/inspect.rb → inspect.rb} +6 -6
  71. data/lib/carray/io/imagemagick.rb +1 -1
  72. data/lib/carray/{base/iterator.rb → iterator.rb} +3 -3
  73. data/lib/carray/mask.rb +91 -0
  74. data/lib/carray/{base/math.rb → math.rb} +16 -46
  75. data/lib/carray/math/histogram.rb +7 -7
  76. data/lib/carray/mkmf.rb +8 -0
  77. data/lib/carray/object/ca_obj_pack.rb +8 -8
  78. data/lib/carray/obsolete.rb +272 -0
  79. data/lib/carray/ordering.rb +157 -0
  80. data/lib/carray/{base/serialize.rb → serialize.rb} +28 -53
  81. data/lib/carray/{base/string.rb → string.rb} +12 -64
  82. data/lib/carray/{base/struct.rb → struct.rb} +16 -16
  83. data/lib/carray/{io/table.rb → table.rb} +1 -10
  84. data/lib/carray/testing.rb +56 -0
  85. data/lib/carray/time.rb +78 -0
  86. data/lib/carray/transform.rb +100 -0
  87. data/misc/Methods.ja.md +182 -0
  88. data/{NOTE → misc/NOTE} +0 -0
  89. data/test/test_ALL.rb +0 -2
  90. data/test/test_order.rb +7 -7
  91. data/test/test_ref_store.rb +13 -13
  92. data/test/test_stat.rb +7 -15
  93. data/{devel → utils}/guess_shape.rb +0 -0
  94. data/utils/{diff_method.rb → monkey_patch_methods.rb} +17 -7
  95. metadata +88 -151
  96. data/COPYING +0 -56
  97. data/GPL +0 -340
  98. data/LEGAL +0 -50
  99. data/TODO +0 -5
  100. data/carray_random.c +0 -531
  101. data/devel/im2col.rb +0 -17
  102. data/ext/calculus/carray_calculus.c +0 -931
  103. data/ext/calculus/carray_interp.c +0 -358
  104. data/ext/calculus/extconf.rb +0 -12
  105. data/ext/calculus/lib/math/calculus.rb +0 -119
  106. data/ext/calculus/lib/math/interp/adapter_interp1d.rb +0 -31
  107. data/ext/mathfunc/extconf.rb +0 -18
  108. data/ext/mathfunc/test/test_hypot.rb +0 -5
  109. data/ext/mathfunc/test/test_j0.rb +0 -22
  110. data/ext/mathfunc/test/test_jn.rb +0 -8
  111. data/ext/mathfunc/test/test_sph.rb +0 -9
  112. data/lib/carray/autoload/autoload_io_table.rb +0 -1
  113. data/lib/carray/autoload/autoload_math_interp.rb +0 -4
  114. data/lib/carray/base/basic.rb +0 -1146
  115. data/lib/carray/base/obsolete.rb +0 -131
  116. data/lib/carray/math/interp.rb +0 -57
  117. data/lib/carray/math/interp/adapter_gsl_spline.rb +0 -47
  118. data/mt19937ar.c +0 -182
  119. data/mt19937ar.h +0 -86
  120. data/rdoc_main.rb +0 -27
  121. data/rdoc_math.rb +0 -5
  122. data/rdoc_stat.rb +0 -31
  123. data/test/test_narray.rb +0 -64
  124. data/test/test_random.rb +0 -15
  125. data/utils/create_rdoc.sh +0 -9
  126. data/utils/make_tgz.sh +0 -3
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
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@@ -0,0 +1,22 @@
1
+ Copyright (c) 2020 Hiroki Motoyoshi.
2
+
3
+ Permission is hereby granted, free of charge, to any person
4
+ obtaining a copy of this software and associated documentation
5
+ files (the "Software"), to deal in the Software without
6
+ restriction, including without limitation the rights to use,
7
+ copy, modify, merge, publish, distribute, sublicense, and/or sell
8
+ copies of the Software, and to permit persons to whom the
9
+ Software is furnished to do so, subject to the following
10
+ conditions:
11
+
12
+ The above copyright notice and this permission notice shall be
13
+ included in all copies or substantial portions of the Software.
14
+
15
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
16
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
17
+ OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
18
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
19
+ HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
20
+ WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
21
+ FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
22
+ OTHER DEALINGS IN THE SOFTWARE.
data/README.md CHANGED
@@ -3,34 +3,38 @@ Ruby/CArray
3
3
 
4
4
  Ruby/CArray is an extension library for the multi-dimensional array class.
5
5
 
6
+ Features
7
+ --------
8
+
9
+ * Multidimensional array for storing uniform data
10
+ * Various ways to access data elements
11
+ * Masks for each element to handle missing values
12
+ * Element-wise operations and mathematical functions
13
+ * Statistical functions for the elements
14
+ * Indirect data manipulation for original array by virtual array
15
+ * Special iterators (dimension, block, window, categorical)
16
+ * User-defined array
17
+ * Storing fixed length data with data_class
18
+ * Memory sharing with other objects (Experimental)
19
+
6
20
  Requirements
7
21
  ------------
8
22
 
9
- * Ruby 2.2.0 or later
23
+ * Ruby 2.4.0 or later
10
24
  * C compiler
11
25
  + IEEE754 floating point number
12
26
  + C99 complex number
13
- * Optional command
14
- + ImageMagick (stream, convert, display, identify)
15
27
 
16
28
  Directories
17
29
  -----------
18
30
 
19
31
  . - Ruby/CArray extension source codes
20
32
  lib - Ruby/CArray standard library in Ruby
21
- ext - optional extension libraries for Ruby/CArray
22
- examples - some examples
23
33
  test - some unit tests (incomplete)
24
34
  spec - some rspec (incomplete)
25
35
  utils - support tools for development.
26
36
 
27
- Author
28
- ------
29
-
30
- Hiroki Motoyoshi
31
-
32
- Copying
33
- -------
37
+ Licenses
38
+ --------
34
39
 
35
- You can redistribute this library package and/or modify it under the terms of
36
- the Ruby Licence. See the file 'COPYING' in this directory.
40
+ MIT (after version 1.5.0)
data/Rakefile CHANGED
@@ -6,7 +6,7 @@ GEMSPEC = "carray.gemspec"
6
6
 
7
7
  task :install do
8
8
  spec = eval File.read(GEMSPEC)
9
- version_h = `ruby version.rb`.chomp
9
+ version_h = `ruby ext/version.rb`.chomp
10
10
  if spec.version.to_s != version_h
11
11
  STDERR.puts "Mismatch in version between carray.gemspec and version.h"
12
12
  STDERR.puts " carray.gemspec - #{spec.version.to_s }"
@@ -1,6 +1,6 @@
1
1
  Gem::Specification::new do |s|
2
2
 
3
- version = "1.4.0"
3
+ version = "1.5.1"
4
4
 
5
5
  files = Dir.glob("**/*") - [
6
6
  Dir.glob("carray-*.gem"),
@@ -12,7 +12,7 @@ Gem::Specification::new do |s|
12
12
 
13
13
  s.platform = Gem::Platform::RUBY
14
14
  s.name = "carray"
15
- s.summary = "Multi-dimesional array class"
15
+ s.summary = "Multi-dimesional array class for Ruby"
16
16
  s.description = <<-HERE
17
17
  CArray is a uniform multi-dimensional rectangular array class.
18
18
  It provides the various types of sub-arrays and references
@@ -22,18 +22,10 @@ Gem::Specification::new do |s|
22
22
  s.version = version
23
23
  s.author = "Hiroki Motoyoshi"
24
24
  s.email = ""
25
+ s.licenses = ['MIT']
25
26
  s.homepage = 'https://github.com/himotoyoshi/carray'
26
27
  s.files = files
27
- s.extensions = [ "extconf.rb" ] +
28
- Dir["ext/*/extconf.rb"].select{|f| File.exist?(f) }
29
- s.rdoc_options = [
30
- "-m rdoc_main.rb",
31
- "rdoc_main.rb",
32
- "rdoc_ext.rb",
33
- "rdoc_math.rb",
34
- "rdoc_stat.rb",
35
- Dir.glob("lib/carray/**/*.rb"),
36
- ].flatten
37
- s.required_ruby_version = ">= 1.8.1"
28
+ s.extensions = [ "ext/extconf.rb" ]
29
+ s.required_ruby_version = ">= 2.4.0"
38
30
  end
39
31
 
@@ -23,7 +23,7 @@ VALUE rb_cCABlockIterator;
23
23
  typedef struct {
24
24
  int16_t obj_type;
25
25
  int8_t data_type;
26
- int8_t rank;
26
+ int8_t ndim;
27
27
  int32_t flags;
28
28
  ca_size_t bytes;
29
29
  ca_size_t elements;
@@ -42,11 +42,11 @@ typedef struct {
42
42
  ca_size_t *step;
43
43
  ca_size_t *count;
44
44
  ca_size_t *size0;
45
- } CABlock; // 68 + 20*(rank) (bytes)
45
+ } CABlock; // 68 + 20*(ndim) (bytes)
46
46
  */
47
47
 
48
48
  typedef struct {
49
- int8_t rank;
49
+ int8_t ndim;
50
50
  ca_size_t dim[CA_RANK_MAX];
51
51
  CArray *reference;
52
52
  CArray * (*kernel_at_addr)(void *, ca_size_t, CArray *);
@@ -73,14 +73,14 @@ ca_bi_kernel_at_index (void *it, ca_size_t *idx, CArray *ref)
73
73
  else {
74
74
  CABlock *ck = (CABlock *)bit->kernel;
75
75
  kernel = ca_block_new(ref,
76
- ck->rank, ck->size0,
76
+ ck->ndim, ck->size0,
77
77
  ck->start, ck->step, ck->count,
78
78
  ck->offset);
79
79
  }
80
80
 
81
81
  ca_update_mask(kernel);
82
82
 
83
- for (i=0; i<kernel->rank; i++) {
83
+ for (i=0; i<kernel->ndim; i++) {
84
84
  j = idx[i];
85
85
  CA_CHECK_INDEX(j, bit->dim[i]);
86
86
  kernel->start[i] += j * kernel->dim[i];
@@ -99,7 +99,7 @@ ca_bi_kernel_at_addr (void *it, ca_size_t addr, CArray *ref)
99
99
  ca_size_t *dim = bit->dim;
100
100
  ca_size_t idx[CA_RANK_MAX];
101
101
  int8_t i;
102
- for (i=bit->rank-1; i>=0; i--) {
102
+ for (i=bit->ndim-1; i>=0; i--) {
103
103
  idx[i] = addr % dim[i];
104
104
  addr /= dim[i];
105
105
  }
@@ -117,7 +117,7 @@ ca_bi_kernel_move_to_index (void *it, ca_size_t *idx, CArray *kern)
117
117
 
118
118
  ca_update_mask(kernel);
119
119
 
120
- for (i=0; i<kernel->rank; i++) {
120
+ for (i=0; i<kernel->ndim; i++) {
121
121
  j = idx[i];
122
122
  CA_CHECK_INDEX(j, bit->dim[i]);
123
123
  kernel->start[i] = j * kernel->dim[i];
@@ -136,7 +136,7 @@ ca_bi_kernel_move_to_addr (void *it, ca_size_t addr, CArray *ref)
136
136
  ca_size_t *dim = bit->dim;
137
137
  ca_size_t idx[CA_RANK_MAX];
138
138
  int8_t i;
139
- for (i=bit->rank-1; i>=0; i--) {
139
+ for (i=bit->ndim-1; i>=0; i--) {
140
140
  idx[i] = addr % dim[i];
141
141
  addr /= dim[i];
142
142
  }
@@ -158,11 +158,11 @@ ca_bi_setup (VALUE self, VALUE rref, VALUE rker)
158
158
  Data_Get_Struct(rref, CArray, ref);
159
159
  Data_Get_Struct(rker, CABlock, ker);
160
160
 
161
- if ( ref->rank != ker->rank ) {
162
- rb_raise(rb_eRuntimeError, "rank mismatch between reference and kernel");
161
+ if ( ref->ndim != ker->ndim ) {
162
+ rb_raise(rb_eRuntimeError, "ndim mismatch between reference and kernel");
163
163
  }
164
164
 
165
- for (i=0; i<ref->rank; i++) {
165
+ for (i=0; i<ref->ndim; i++) {
166
166
  if ( ker->step[i] != 1 ) {
167
167
  rb_raise(rb_eRuntimeError, "block should be contiguous");
168
168
  }
@@ -174,8 +174,8 @@ ca_bi_setup (VALUE self, VALUE rref, VALUE rker)
174
174
  */
175
175
  }
176
176
 
177
- it->rank = ref->rank;
178
- memcpy(it->dim, dim, it->rank * sizeof(ca_size_t));
177
+ it->ndim = ref->ndim;
178
+ memcpy(it->dim, dim, it->ndim * sizeof(ca_size_t));
179
179
  it->reference = ref;
180
180
  it->kernel = ker;
181
181
  it->kernel_at_addr = ca_bi_kernel_at_addr;
@@ -21,7 +21,7 @@ VALUE rb_cCADimIterator;
21
21
  */
22
22
 
23
23
  typedef struct {
24
- int8_t rank;
24
+ int8_t ndim;
25
25
  ca_size_t dim[CA_RANK_MAX];
26
26
  CArray *reference;
27
27
  CArray * (*kernel_at_addr)(void *, ca_size_t, CArray *);
@@ -50,14 +50,14 @@ ca_di_kernel_at_index (void *it, ca_size_t *idx, CArray *ref)
50
50
  else {
51
51
  CABlock *ck = (CABlock *)dit->kernel;
52
52
  kernel = ca_block_new(ref,
53
- ck->rank, ck->size0,
53
+ ck->ndim, ck->size0,
54
54
  ck->start, ck->step, ck->count,
55
55
  ck->offset);
56
56
  }
57
57
 
58
58
  ca_update_mask(kernel);
59
59
 
60
- for (i=0; i<dit->rank; i++) {
60
+ for (i=0; i<dit->ndim; i++) {
61
61
  val = idx[i];
62
62
  CA_CHECK_INDEX(val, dit->dim[i]);
63
63
  kernel->start[dit->symindex[i]] = val * kernel->step[dit->symindex[i]];
@@ -77,7 +77,7 @@ ca_di_kernel_at_addr (void *it, ca_size_t addr, CArray *ref)
77
77
  ca_size_t *dim = dit->dim;
78
78
  ca_size_t idx[CA_RANK_MAX];
79
79
  int8_t i;
80
- for (i=dit->rank-1; i>=0; i--) {
80
+ for (i=dit->ndim-1; i>=0; i--) {
81
81
  idx[i] = addr % dim[i];
82
82
  addr /= dim[i];
83
83
  }
@@ -94,7 +94,7 @@ ca_di_kernel_move_to_index (void *it, ca_size_t *idx, CArray *kern)
94
94
 
95
95
  ca_update_mask(kernel);
96
96
 
97
- for (i=0; i<dit->rank; i++) {
97
+ for (i=0; i<dit->ndim; i++) {
98
98
  val = idx[i];
99
99
  CA_CHECK_INDEX(val, dit->dim[i]);
100
100
  kernel->start[dit->symindex[i]] = val * kernel->step[dit->symindex[i]];
@@ -114,7 +114,7 @@ ca_di_kernel_move_to_addr (void *it, ca_size_t addr, CArray *ref)
114
114
  ca_size_t *dim = dit->dim;
115
115
  ca_size_t idx[CA_RANK_MAX];
116
116
  int8_t i;
117
- for (i=dit->rank-1; i>=0; i--) {
117
+ for (i=dit->ndim-1; i>=0; i--) {
118
118
  idx[i] = addr % dim[i];
119
119
  addr /= dim[i];
120
120
  }
@@ -129,7 +129,7 @@ ca_di_setup (VALUE self, VALUE rref, CAIndexInfo *info)
129
129
  volatile VALUE rindex, rker, rsymtbl;
130
130
  CADimIterator *it;
131
131
  CAIndexInfo blk_spec;
132
- int8_t rank;
132
+ int8_t ndim;
133
133
  int i, j, k;
134
134
 
135
135
  Data_Get_Struct(self, CADimIterator, it);
@@ -142,7 +142,7 @@ ca_di_setup (VALUE self, VALUE rref, CAIndexInfo *info)
142
142
 
143
143
  blk_spec = *info;
144
144
  blk_spec.type = CA_REG_BLOCK;
145
- for (i=0; i<info->rank; i++) {
145
+ for (i=0; i<info->ndim; i++) {
146
146
  if ( info->index_type[i] == CA_IDX_SYMBOL ) {
147
147
  blk_spec.index_type[i] = CA_IDX_ALL;
148
148
  rb_hash_aset(rsymtbl, ID2SYM(blk_spec.index[i].symbol.id), INT2NUM(i));
@@ -151,13 +151,13 @@ ca_di_setup (VALUE self, VALUE rref, CAIndexInfo *info)
151
151
 
152
152
  rref = rb_ca_ref_block(rref, &blk_spec);
153
153
 
154
- rindex = rb_ary_new2(info->rank);
155
- rank = 0;
154
+ rindex = rb_ary_new2(info->ndim);
155
+ ndim = 0;
156
156
 
157
157
  j = 0;
158
158
  k = 0;
159
159
 
160
- for (i=0; i<info->rank; i++) {
160
+ for (i=0; i<info->ndim; i++) {
161
161
  if ( info->index_type[i] == CA_IDX_SCALAR ) {
162
162
  rb_ary_store(rindex, i, SIZE2NUM(info->index[i].scalar));
163
163
  continue; /* escape from j++ */
@@ -165,8 +165,8 @@ ca_di_setup (VALUE self, VALUE rref, CAIndexInfo *info)
165
165
  else if ( info->index_type[i] == CA_IDX_SYMBOL ) {
166
166
  rb_ary_store(rindex, i, rb_ary_new3(1, SIZE2NUM(0)));
167
167
  it->symflag[j] = 1;
168
- it->symindex[rank] = j;
169
- rank++;
168
+ it->symindex[ndim] = j;
169
+ ndim++;
170
170
  }
171
171
  else if ( info->index_type[i] == CA_IDX_ALL ) {
172
172
  rb_ary_store(rindex, i, Qnil);
@@ -184,7 +184,7 @@ ca_di_setup (VALUE self, VALUE rref, CAIndexInfo *info)
184
184
 
185
185
  rker = rb_apply(rref, rb_intern("[]"), rindex);
186
186
 
187
- it->rank = rank;
187
+ it->ndim = ndim;
188
188
  Data_Get_Struct(rref, CArray, it->reference);
189
189
  Data_Get_Struct(rker, CArray, it->kernel);
190
190
  it->kernel_at_addr = ca_di_kernel_at_addr;
@@ -192,7 +192,7 @@ ca_di_setup (VALUE self, VALUE rref, CAIndexInfo *info)
192
192
  it->kernel_move_to_addr = ca_di_kernel_move_to_addr;
193
193
  it->kernel_move_to_index = ca_di_kernel_move_to_index;
194
194
 
195
- for (i=0; i<it->rank; i++) {
195
+ for (i=0; i<it->ndim; i++) {
196
196
  it->dim[i] = it->reference->dim[it->symindex[i]];
197
197
  }
198
198
 
@@ -239,7 +239,7 @@ rb_ca_dim_iterator (int argc, VALUE *argv, VALUE self)
239
239
 
240
240
  Data_Get_Struct(self, CArray, ca);
241
241
 
242
- rb_ca_scan_index(ca->rank, ca->dim, ca->elements, argc, argv, &info);
242
+ rb_ca_scan_index(ca->ndim, ca->dim, ca->elements, argc, argv, &info);
243
243
 
244
244
  obj = rb_di_s_allocate(rb_cCADimIterator);
245
245
  ca_di_setup(obj, self, &info);
@@ -13,7 +13,7 @@
13
13
  #include "carray.h"
14
14
 
15
15
  typedef struct {
16
- int8_t rank;
16
+ int8_t ndim;
17
17
  ca_size_t dim[CA_RANK_MAX];
18
18
  CArray *reference;
19
19
  CArray * (*kernel_at_addr)(void *, ca_size_t, CArray *);
@@ -59,7 +59,7 @@ ca_vi_kernel_at_index (void *it, ca_size_t *idx, CArray *ref)
59
59
 
60
60
  ca_update_mask(kernel);
61
61
 
62
- for (i=0; i<kernel->rank; i++) {
62
+ for (i=0; i<kernel->ndim; i++) {
63
63
  j = idx[i];
64
64
  CA_CHECK_INDEX(j, vit->dim[i]);
65
65
  kernel->start[i] = j - vit->offset[i];
@@ -78,7 +78,7 @@ ca_vi_kernel_at_addr (void *it, ca_size_t addr, CArray *ref)
78
78
  ca_size_t *dim = vit->dim;
79
79
  ca_size_t idx[CA_RANK_MAX];
80
80
  int8_t i;
81
- for (i=vit->rank-1; i>=0; i--) {
81
+ for (i=vit->ndim-1; i>=0; i--) {
82
82
  idx[i] = addr % dim[i];
83
83
  addr /= dim[i];
84
84
  }
@@ -97,7 +97,7 @@ ca_vi_kernel_move_to_index (void *it, ca_size_t *idx, CArray *kern)
97
97
 
98
98
  ca_update_mask(kernel);
99
99
 
100
- for (i=0; i<kernel->rank; i++) {
100
+ for (i=0; i<kernel->ndim; i++) {
101
101
  j = idx[i];
102
102
  CA_CHECK_INDEX(j, dim[i]);
103
103
  kernel->start[i] = j - offset[i];
@@ -116,7 +116,7 @@ ca_vi_kernel_move_to_addr (void *it, ca_size_t addr, CArray *ref)
116
116
  ca_size_t *dim = vit->dim;
117
117
  ca_size_t idx[CA_RANK_MAX];
118
118
  int8_t i;
119
- for (i=vit->rank-1; i>=0; i--) {
119
+ for (i=vit->ndim-1; i>=0; i--) {
120
120
  idx[i] = addr % dim[i];
121
121
  addr /= dim[i];
122
122
  }
@@ -136,12 +136,12 @@ ca_vi_setup (VALUE self, VALUE rref, VALUE rker)
136
136
  Data_Get_Struct(rref, CArray, ref);
137
137
  Data_Get_Struct(rker, CArray, ker);
138
138
 
139
- if ( ref->rank != ker->rank ) {
140
- rb_raise(rb_eRuntimeError, "rank mismatch between reference and kernel");
139
+ if ( ref->ndim != ker->ndim ) {
140
+ rb_raise(rb_eRuntimeError, "ndim mismatch between reference and kernel");
141
141
  }
142
142
 
143
- it->rank = ref->rank;
144
- memcpy(it->dim, ref->dim, it->rank * sizeof(ca_size_t));
143
+ it->ndim = ref->ndim;
144
+ memcpy(it->dim, ref->dim, it->ndim * sizeof(ca_size_t));
145
145
  it->reference = ref;
146
146
  it->kernel = ker;
147
147
  it->kernel_at_addr = ca_vi_kernel_at_addr;
@@ -149,7 +149,7 @@ ca_vi_setup (VALUE self, VALUE rref, VALUE rker)
149
149
  it->kernel_move_to_addr = ca_vi_kernel_move_to_addr;
150
150
  it->kernel_move_to_index = ca_vi_kernel_move_to_index;
151
151
 
152
- for (i=0; i<it->rank; i++) {
152
+ for (i=0; i<it->ndim; i++) {
153
153
  it->offset[i] = -(((CAWindow*)ker)->start[i]);
154
154
  }
155
155
 
@@ -42,7 +42,7 @@ double ca_mem_count = 0.0;
42
42
 
43
43
  /* Threshold for forced garbage collection and its default value */
44
44
  double ca_gc_interval;
45
- const double ca_default_gc_interval = 40.0; /* 40MB */
45
+ const double ca_default_gc_interval = 100.0; /* 100MB */
46
46
 
47
47
  #define MB (1024*1024)
48
48
 
@@ -117,7 +117,7 @@ rb_ca_reset_gc_interval (VALUE self)
117
117
 
118
118
  static int
119
119
  carray_setup_i (CArray *ca,
120
- int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes,
120
+ int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes,
121
121
  CArray *mask, int allocate, int use_calloc)
122
122
  {
123
123
  ca_size_t elements;
@@ -127,14 +127,14 @@ carray_setup_i (CArray *ca,
127
127
 
128
128
  /* check arguments */
129
129
  CA_CHECK_DATA_TYPE(data_type);
130
- CA_CHECK_RANK(rank);
131
- CA_CHECK_DIM(rank, dim);
130
+ CA_CHECK_RANK(ndim);
131
+ CA_CHECK_DIM(ndim, dim);
132
132
  CA_CHECK_BYTES(data_type, bytes);
133
133
 
134
134
  /* calculate total number of elements */
135
135
  elements = 1;
136
136
  length = bytes;
137
- for (i=0; i<rank; i++) {
137
+ for (i=0; i<ndim; i++) {
138
138
  elements *= dim[i];
139
139
  length *= dim[i];
140
140
  }
@@ -153,11 +153,11 @@ carray_setup_i (CArray *ca,
153
153
 
154
154
  ca->data_type = data_type;
155
155
  ca->flags = 0;
156
- ca->rank = rank;
156
+ ca->ndim = ndim;
157
157
  ca->bytes = bytes;
158
158
  ca->elements = elements;
159
- ca->dim = ALLOC_N(ca_size_t, rank);
160
- memcpy(ca->dim, dim, rank*sizeof(ca_size_t));
159
+ ca->dim = ALLOC_N(ca_size_t, ndim);
160
+ memcpy(ca->dim, dim, ndim*sizeof(ca_size_t));
161
161
 
162
162
  if ( allocate ) { /* allocate == true */
163
163
 
@@ -201,26 +201,26 @@ carray_setup_i (CArray *ca,
201
201
 
202
202
  int
203
203
  carray_setup (CArray *ca,
204
- int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes, CArray *mask)
204
+ int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes, CArray *mask)
205
205
  {
206
- return carray_setup_i(ca, data_type, rank, dim, bytes, mask, 1, 0);
206
+ return carray_setup_i(ca, data_type, ndim, dim, bytes, mask, 1, 0);
207
207
  }
208
208
 
209
209
  int
210
210
  carray_safe_setup (CArray *ca,
211
- int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes, CArray *mask)
211
+ int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes, CArray *mask)
212
212
  {
213
- return carray_setup_i(ca, data_type, rank, dim, bytes, mask, 1, 1);
213
+ return carray_setup_i(ca, data_type, ndim, dim, bytes, mask, 1, 1);
214
214
  }
215
215
 
216
216
  int
217
217
  ca_wrap_setup (CArray *ca,
218
- int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes,
218
+ int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes,
219
219
  CArray *mask, char *ptr)
220
220
  {
221
221
  int ret;
222
222
 
223
- ret = carray_setup_i(ca, data_type, rank, dim, bytes, mask, 0, 0);
223
+ ret = carray_setup_i(ca, data_type, ndim, dim, bytes, mask, 0, 0);
224
224
  if ( (!ptr) && (ca->elements != 0) ) {
225
225
  rb_raise(rb_eRuntimeError, "wrapping NULL pointer with an non-empty array");
226
226
  }
@@ -230,49 +230,49 @@ ca_wrap_setup (CArray *ca,
230
230
 
231
231
  int
232
232
  ca_wrap_setup_null (CArray *ca,
233
- int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes,
233
+ int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes,
234
234
  CArray *mask)
235
235
  {
236
236
  int ret;
237
237
 
238
- ret = carray_setup_i(ca, data_type, rank, dim, bytes, mask, 0, 0);
238
+ ret = carray_setup_i(ca, data_type, ndim, dim, bytes, mask, 0, 0);
239
239
  ca->ptr = NULL;
240
240
  return ret;
241
241
  }
242
242
 
243
243
  CArray *
244
- carray_new (int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes,
244
+ carray_new (int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes,
245
245
  CArray *mask)
246
246
  {
247
247
  CArray *ca = ALLOC(CArray);
248
- carray_setup(ca, data_type, rank, dim, bytes, mask);
248
+ carray_setup(ca, data_type, ndim, dim, bytes, mask);
249
249
  return ca;
250
250
  }
251
251
 
252
252
  CArray *
253
- carray_new_safe (int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes,
253
+ carray_new_safe (int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes,
254
254
  CArray *mask)
255
255
  {
256
256
  CArray *ca = ALLOC(CArray);
257
- carray_safe_setup(ca, data_type, rank, dim, bytes, mask);
257
+ carray_safe_setup(ca, data_type, ndim, dim, bytes, mask);
258
258
  return ca;
259
259
  }
260
260
 
261
261
  CAWrap *
262
- ca_wrap_new (int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes,
262
+ ca_wrap_new (int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes,
263
263
  CArray *mask, char *ptr)
264
264
  {
265
265
  CAWrap *ca = ALLOC(CAWrap);
266
- ca_wrap_setup(ca, data_type, rank, dim, bytes, mask, ptr);
266
+ ca_wrap_setup(ca, data_type, ndim, dim, bytes, mask, ptr);
267
267
  return ca;
268
268
  }
269
269
 
270
270
  CAWrap *
271
- ca_wrap_new_null (int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes,
271
+ ca_wrap_new_null (int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes,
272
272
  CArray *mask)
273
273
  {
274
274
  CAWrap *ca = ALLOC(CAWrap);
275
- ca_wrap_setup_null(ca, data_type, rank, dim, bytes, mask);
275
+ ca_wrap_setup_null(ca, data_type, ndim, dim, bytes, mask);
276
276
  return ca;
277
277
  }
278
278
 
@@ -313,7 +313,7 @@ cscalar_setup (CScalar *ca,
313
313
  ca->obj_type = CA_OBJ_SCALAR;
314
314
  ca->data_type = data_type;
315
315
  ca->flags = 0;
316
- ca->rank = 1;
316
+ ca->ndim = 1;
317
317
  ca->bytes = bytes;
318
318
  ca->elements = 1;
319
319
  ca->dim = &(ca->_dim);
@@ -388,7 +388,7 @@ ca_array_func_clone (void *ap)
388
388
  {
389
389
  CArray *ca = (CArray *) ap;
390
390
  CArray *co;
391
- co = carray_new(ca->data_type, ca->rank, ca->dim, ca->bytes, ca->mask);
391
+ co = carray_new(ca->data_type, ca->ndim, ca->dim, ca->bytes, ca->mask);
392
392
  memcpy(co->ptr, ca->ptr, ca_length(ca));
393
393
  return co;
394
394
  }
@@ -407,9 +407,9 @@ ca_array_func_ptr_at_index (void *ap, ca_size_t *idx)
407
407
  ca_size_t *dim = ca->dim;
408
408
  int8_t i;
409
409
  ca_size_t n;
410
- n = idx[0]; /* n = idx[0]*dim[1]*dim[2]*...*dim[rank-1] */
411
- for (i=1; i<ca->rank; i++) { /* + idx[1]*dim[1]*dim[2]*...*dim[rank-1] */
412
- n = dim[i]*n+idx[i]; /* ... + idx[rank-2]*dim[1] + idx[rank-1] */
410
+ n = idx[0]; /* n = idx[0]*dim[1]*dim[2]*...*dim[ndim-1] */
411
+ for (i=1; i<ca->ndim; i++) { /* + idx[1]*dim[1]*dim[2]*...*dim[ndim-1] */
412
+ n = dim[i]*n+idx[i]; /* ... + idx[ndim-2]*dim[1] + idx[ndim-1] */
413
413
  }
414
414
  return ca->ptr + ca->bytes * n;
415
415
  }
@@ -429,7 +429,7 @@ ca_array_func_fetch_index (void *ap, ca_size_t *idx, void *ptr)
429
429
  int8_t i;
430
430
  ca_size_t n;
431
431
  n = idx[0];
432
- for (i=1; i<ca->rank; i++) {
432
+ for (i=1; i<ca->ndim; i++) {
433
433
  n = dim[i]*n+idx[i];
434
434
  }
435
435
  memcpy(ptr, ca->ptr + ca->bytes * n, ca->bytes);
@@ -450,7 +450,7 @@ ca_array_func_store_index (void *ap, ca_size_t *idx, void *ptr)
450
450
  int8_t i;
451
451
  ca_size_t n;
452
452
  n = idx[0];
453
- for (i=1; i<ca->rank; i++) {
453
+ for (i=1; i<ca->ndim; i++) {
454
454
  n = dim[i]*n+idx[i];
455
455
  }
456
456
  memcpy(ca->ptr + ca->bytes * n, ptr, ca->bytes);
@@ -547,7 +547,7 @@ void
547
547
  ca_array_func_create_mask (void *ap)
548
548
  {
549
549
  CArray *ca = (CArray *) ap;
550
- ca->mask = carray_new_safe(CA_BOOLEAN, ca->rank, ca->dim, 0, NULL);
550
+ ca->mask = carray_new_safe(CA_BOOLEAN, ca->ndim, ca->dim, 0, NULL);
551
551
  }
552
552
 
553
553
  ca_operation_function_t ca_array_func = {
@@ -654,18 +654,18 @@ ca_operation_function_t ca_scalar_func = {
654
654
  /* ------------------------------------------------------------------- */
655
655
 
656
656
  VALUE
657
- rb_carray_new (int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes,
657
+ rb_carray_new (int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes,
658
658
  CArray *mask)
659
659
  {
660
- CArray *ca = carray_new(data_type, rank, dim, bytes, mask);
660
+ CArray *ca = carray_new(data_type, ndim, dim, bytes, mask);
661
661
  return ca_wrap_struct(ca);
662
662
  }
663
663
 
664
664
  VALUE
665
- rb_carray_new_safe (int8_t data_type, int8_t rank, ca_size_t *dim, ca_size_t bytes,
665
+ rb_carray_new_safe (int8_t data_type, int8_t ndim, ca_size_t *dim, ca_size_t bytes,
666
666
  CArray *mask)
667
667
  {
668
- CArray *ca = carray_new_safe(data_type, rank, dim, bytes, mask);
668
+ CArray *ca = carray_new_safe(data_type, ndim, dim, bytes, mask);
669
669
  return ca_wrap_struct(ca);
670
670
  }
671
671
 
@@ -704,7 +704,7 @@ rb_ca_s_allocate (VALUE klass)
704
704
  # CArray.new(data_type, dim, bytes=0) { ... }
705
705
  #
706
706
  # Constructs a new CArray object of <i>data_type</i>, which has the
707
- # rank and the dimensions specified by an <code>Array</code> of
707
+ # ndim and the dimensions specified by an <code>Array</code> of
708
708
  # <code>Integer</code> or an argument list of <code>Integer</code>.
709
709
  # The byte size of each element for the fixed length data type
710
710
  # (<code>data_type == CA_FIXLEN</code>) is specified optional argument
@@ -720,7 +720,7 @@ rb_ca_initialize (int argc, VALUE *argv, VALUE self)
720
720
  {
721
721
  volatile VALUE rtype, rdim, ropt, rbytes = Qnil;
722
722
  CArray *ca;
723
- int8_t data_type, rank;
723
+ int8_t data_type, ndim;
724
724
  ca_size_t dim[CA_RANK_MAX];
725
725
  ca_size_t bytes;
726
726
  int8_t i;
@@ -732,13 +732,13 @@ rb_ca_initialize (int argc, VALUE *argv, VALUE self)
732
732
  rb_ca_data_type_import(self, rtype);
733
733
 
734
734
  Check_Type(rdim, T_ARRAY);
735
- rank = RARRAY_LEN(rdim);
736
- for (i=0; i<rank; i++) {
735
+ ndim = RARRAY_LEN(rdim);
736
+ for (i=0; i<ndim; i++) {
737
737
  dim[i] = NUM2SIZE(rb_ary_entry(rdim, i));
738
738
  }
739
739
 
740
740
  Data_Get_Struct(self, CArray, ca);
741
- carray_safe_setup(ca, data_type, rank, dim, bytes, NULL);
741
+ carray_safe_setup(ca, data_type, ndim, dim, bytes, NULL);
742
742
 
743
743
  if ( rb_block_given_p() ) {
744
744
  volatile VALUE rval = rb_yield(self);
@@ -759,13 +759,18 @@ rb_ca_s_fixlen (int argc, VALUE *argv, VALUE klass)
759
759
  return rb_class_new_instance(3, args, klass);
760
760
  }
761
761
 
762
- #define rb_ca_s_type(type, code) \
763
- rb_ca_s_## type (int argc, VALUE *argv, VALUE klass) \
764
- { \
765
- volatile VALUE ropt = rb_pop_options(&argc, &argv); \
766
- volatile VALUE rdim = rb_ary_new4(argc, argv); \
767
- VALUE args[3] = { INT2NUM(code), rdim, ropt }; \
768
- return rb_class_new_instance(3, args, klass); \
762
+ #define rb_ca_s_type(type, code) \
763
+ rb_ca_s_## type (int argc, VALUE *argv, VALUE klass) \
764
+ { \
765
+ if ( argc == 0 ) { \
766
+ return ca_data_type_class(code); \
767
+ } \
768
+ else { \
769
+ volatile VALUE ropt = rb_pop_options(&argc, &argv); \
770
+ volatile VALUE rdim = rb_ary_new4(argc, argv); \
771
+ VALUE args[3] = { INT2NUM(code), rdim, ropt }; \
772
+ return rb_class_new_instance(3, args, klass); \
773
+ } \
769
774
  }
770
775
 
771
776
  /*
@@ -820,7 +825,7 @@ rb_ca_initialize_copy (VALUE self, VALUE other)
820
825
  Data_Get_Struct(other, CArray, cs);
821
826
 
822
827
  ca_update_mask(cs);
823
- carray_setup(ca, cs->data_type, cs->rank, cs->dim, cs->bytes, cs->mask);
828
+ carray_setup(ca, cs->data_type, cs->ndim, cs->dim, cs->bytes, cs->mask);
824
829
 
825
830
  memcpy(ca->ptr, cs->ptr, ca_length(cs));
826
831
 
@@ -837,7 +842,7 @@ rb_ca_s_wrap (int argc, VALUE *argv, VALUE self)
837
842
  {
838
843
  volatile VALUE obj, target, rtype, rdim, ropt, rbytes = Qnil;
839
844
  CArray *ca;
840
- int8_t data_type, rank;
845
+ int8_t data_type, ndim;
841
846
  ca_size_t dim[CA_RANK_MAX];
842
847
  ca_size_t bytes;
843
848
  int8_t i;
@@ -848,15 +853,15 @@ rb_ca_s_wrap (int argc, VALUE *argv, VALUE self)
848
853
  rb_ca_guess_type_and_bytes(rtype, rbytes, &data_type, &bytes);
849
854
 
850
855
  Check_Type(rdim, T_ARRAY);
851
- rank = RARRAY_LEN(rdim);
852
- for (i=0; i<rank; i++) {
856
+ ndim = RARRAY_LEN(rdim);
857
+ for (i=0; i<ndim; i++) {
853
858
  dim[i] = NUM2SIZE(rb_ary_entry(rdim, i));
854
859
  }
855
860
 
856
861
  target = rb_yield_values(0);
857
862
 
858
863
  obj = Data_Make_Struct(rb_cCAWrap, CAWrap, ca_mark, ca_free, ca);
859
- ca_wrap_setup_null(ca, data_type, rank, dim, bytes, NULL);
864
+ ca_wrap_setup_null(ca, data_type, ndim, dim, bytes, NULL);
860
865
 
861
866
  rb_funcall(target, rb_intern("wrap_as_carray"), 1, obj);
862
867
  rb_ivar_set(obj, rb_intern("referred_object"), target);
@@ -865,13 +870,13 @@ rb_ca_s_wrap (int argc, VALUE *argv, VALUE self)
865
870
  }
866
871
 
867
872
  VALUE
868
- rb_carray_wrap_ptr (int8_t data_type, int8_t rank, ca_size_t *dim,
873
+ rb_carray_wrap_ptr (int8_t data_type, int8_t ndim, ca_size_t *dim,
869
874
  ca_size_t bytes, CArray *mask, char *ptr, VALUE refer)
870
875
  {
871
876
  volatile VALUE obj;
872
877
  CArray *ca;
873
878
 
874
- ca = ca_wrap_new(data_type, rank, dim, bytes, mask, ptr);
879
+ ca = ca_wrap_new(data_type, ndim, dim, bytes, mask, ptr);
875
880
  obj = ca_wrap_struct(ca);
876
881
 
877
882
  rb_ivar_set(obj, rb_intern("referred_object"), refer);