carray 1.5.2 → 1.5.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (48) hide show
  1. checksums.yaml +4 -4
  2. data/.yardopts +32 -0
  3. data/NEWS.md +26 -3
  4. data/Rakefile +1 -1
  5. data/TODO.md +5 -4
  6. data/carray.gemspec +7 -5
  7. data/ext/ca_obj_bitarray.c +4 -7
  8. data/ext/ca_obj_bitfield.c +3 -5
  9. data/ext/ca_obj_block.c +1 -6
  10. data/ext/ca_obj_unbound_repeat.c +21 -52
  11. data/ext/carray_attribute.c +16 -1
  12. data/ext/carray_core.c +22 -16
  13. data/ext/carray_math.rb +20 -2
  14. data/ext/carray_numeric.c +32 -51
  15. data/ext/carray_test.c +9 -0
  16. data/ext/carray_undef.c +0 -8
  17. data/ext/version.h +4 -4
  18. data/lib/carray.rb +1 -3
  19. data/lib/carray/autoload.rb +0 -2
  20. data/lib/carray/basic.rb +1 -3
  21. data/lib/carray/broadcast.rb +58 -21
  22. data/lib/carray/compose.rb +34 -10
  23. data/lib/carray/construct.rb +1 -3
  24. data/lib/carray/info.rb +1 -3
  25. data/lib/carray/inspect.rb +3 -5
  26. data/lib/carray/io/imagemagick.rb +1 -3
  27. data/lib/carray/iterator.rb +2 -3
  28. data/lib/carray/mask.rb +18 -7
  29. data/lib/carray/math.rb +4 -6
  30. data/lib/carray/math/histogram.rb +1 -3
  31. data/lib/carray/math/recurrence.rb +1 -3
  32. data/lib/carray/mkmf.rb +1 -3
  33. data/lib/carray/object/ca_obj_iterator.rb +1 -3
  34. data/lib/carray/object/ca_obj_link.rb +1 -3
  35. data/lib/carray/object/ca_obj_pack.rb +1 -3
  36. data/lib/carray/obsolete.rb +1 -3
  37. data/lib/carray/ordering.rb +1 -3
  38. data/lib/carray/serialize.rb +22 -13
  39. data/lib/carray/string.rb +1 -3
  40. data/lib/carray/struct.rb +3 -5
  41. data/lib/carray/testing.rb +5 -10
  42. data/lib/carray/time.rb +1 -3
  43. data/lib/carray/transform.rb +1 -3
  44. data/spec/Classes/CAUnboudRepeat_spec.rb +24 -0
  45. data/spec/Features/feature_boolean_spec.rb +15 -14
  46. data/spec/Features/feature_broadcast.rb +16 -0
  47. data/spec/Features/feature_mask_spec.rb +6 -0
  48. metadata +12 -10
@@ -3,10 +3,8 @@
3
3
  # carray/constructor.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/info.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/inspect.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -159,7 +157,7 @@ class CArray::Inspector # :nodoc:
159
157
  dim[level].times do |i|
160
158
  idx[level] = i
161
159
  v = @carray[*idx]
162
- if v.undef?
160
+ if v == UNDEF
163
161
  io << '_'
164
162
  else
165
163
  io << formatter[v]
@@ -178,7 +176,7 @@ class CArray::Inspector # :nodoc:
178
176
  if over
179
177
  idx[level] = dim[level] - 1
180
178
  v = @carray[*idx]
181
- if v.undef?
179
+ if v == UNDEF
182
180
  io << ", _"
183
181
  else
184
182
  io << ", " + formatter[v]
@@ -3,10 +3,8 @@
3
3
  # carray/io/imagemagick.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/iterator.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -318,6 +316,7 @@ class CAClassIterator < CAIterator # :nodoc:
318
316
  @reference = reference
319
317
  @classifier = classifier || @reference.uniq.sort
320
318
  @null = CArray.new(@reference.data_type,[0])
319
+ @null.data_class = @reference.data_class if @reference.has_data_class?
321
320
  @table = {}
322
321
  @ndim = 1
323
322
  @dim = [0]
@@ -3,21 +3,32 @@
3
3
  # carray/mask.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
13
11
  class CArray
14
-
15
- # mask
16
-
12
+
13
+ # Guard methods for handling variables that can be UNDEF values.
14
+ # Provide different processing depending on whether
15
+ # the given value is UNDEF or not.
17
16
  #
18
- # Returns the number of masked elements.
17
+ # @param value [Object] target object
18
+ # @param fill_value [Object] alternative value if the given value is UNDEF
19
+ #
20
+ # @return fill_value if the given value is UNDEF, block return value if block
21
+ # is given, or value itself
19
22
  #
23
+ def self.guard_undef (*values, fill_value: UNDEF, &block)
24
+ return fill_value if values.any?{|v| v == UNDEF }
25
+ return block.(*values)
26
+ end
20
27
 
28
+ # mask
29
+ #
30
+ # Returns the number of masked elements.
31
+ #
21
32
  def count_masked (*axis)
22
33
  if has_mask?
23
34
  return mask.int64.accumulate(*axis)
@@ -3,10 +3,8 @@
3
3
  # carray/math.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -318,7 +316,7 @@ class CArray
318
316
  count = x.count_not_masked
319
317
  xm = x.mean(:min_count => min_count)
320
318
  ym = y.mean(:min_count => min_count)
321
- if ( xm.undef? or ym.undef? )
319
+ if ( xm == UNDEF or ym == UNDEF )
322
320
  return fill_value || UNDEF
323
321
  else
324
322
  return (x-xm).wsum(y-ym)/count
@@ -337,7 +335,7 @@ class CArray
337
335
  count = x.count_not_masked
338
336
  xm = x.mean(:min_count=>min_count)
339
337
  ym = y.mean(:min_count=>min_count)
340
- if ( xm.undef? or ym.undef? )
338
+ if ( xm == UNDEF or ym == UNDEF )
341
339
  return fill_value || UNDEF
342
340
  else
343
341
  return (x-xm).wsum(y-ym)/(count-1)
@@ -355,7 +353,7 @@ class CArray
355
353
  y.inherit_mask(x)
356
354
  xm = x.mean(:min_count=>min_count)
357
355
  ym = y.mean(:min_count=>min_count)
358
- if ( xm.undef? or ym.undef? )
356
+ if ( xm == UNDEF or ym == UNDEF )
359
357
  return fill_value || UNDEF
360
358
  else
361
359
  xd, yd = x-xm, y-ym
@@ -3,10 +3,8 @@
3
3
  # carray/math/histogram.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/math/recurrence.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/mkmf.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/object/ca_obj_iterator.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/object/ca_obj_link.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/object/ca_obj_pack.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/obsolete.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/ordering.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/serialize.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
  #
@@ -41,8 +39,10 @@
41
39
  # has_attribute : int32
42
40
  #
43
41
  # offset 256 bytes
44
- # data : bytes*elements : value data
45
- # mask : int8*elements : mask data if has_mask == 1
42
+ # data : bytes*elements : value data
43
+ # mask : int8*elements : mask data if has_mask == 1
44
+ # attribute : object marshal : attribute
45
+ # data_class_name : string marshal : data_class_name
46
46
 
47
47
  require "stringio"
48
48
 
@@ -59,6 +59,7 @@ class CArray::Serializer # :nodoc:
59
59
  int32 :has_mask
60
60
  array :dim, :type => CArray.int64(CA_RANK_MAX)
61
61
  int32 :has_attr
62
+ int32 :has_data_class
62
63
  }
63
64
 
64
65
  Header_Legacy = CA.struct(:pack=>1, :size=>256) {
@@ -95,15 +96,16 @@ class CArray::Serializer # :nodoc:
95
96
  header[:ndim] = ca.ndim
96
97
  header[:elements] = ca.elements
97
98
  header[:has_mask] = ca.has_mask? ? 1 : 0
99
+ header[:has_data_class] = ca.has_data_class? ? 1 : 0
98
100
  header[:dim][[0,ca.ndim]] = ca.dim
99
- attr = nil
101
+ attributes = nil
100
102
  if ca.attribute
101
- attr = ca.attribute.clone
103
+ attributes = ca.attribute.clone
102
104
  end
103
105
  if opt[:attribute]
104
- (attr ||= {}).update(opt[:attribute])
106
+ (attributes ||= {}).update(opt[:attribute])
105
107
  end
106
- header[:has_attr] = attr.empty? ? 0 : 1
108
+ header[:has_attr] = attributes.empty? ? 0 : 1
107
109
  unless CArray.endian == endian
108
110
  header.swap_bytes!
109
111
  end
@@ -121,8 +123,11 @@ class CArray::Serializer # :nodoc:
121
123
  if ca.has_mask?
122
124
  ca.mask.dump_binary(@io)
123
125
  end
124
- if attr
125
- Marshal.dump(attr, @io)
126
+ if attributes
127
+ Marshal.dump(attributes, @io)
128
+ end
129
+ if ca.has_data_class?
130
+ Marshal.dump(ca.data_class.to_s, @io)
126
131
  end
127
132
  return ca
128
133
  end
@@ -151,7 +156,8 @@ class CArray::Serializer # :nodoc:
151
156
  elements = header[:elements]
152
157
  has_mask = header[:has_mask] != 0 ? true : false
153
158
  dim = header[:dim][[0, ndim]].to_a
154
- has_attr = header[:has_attr]
159
+ has_attr = header[:has_attr] != 0 ? true : false
160
+ has_data_class = header[:has_data_class] != 0 ? true : false
155
161
  if data_type == 255
156
162
  data_type = header[:data_type_name].strip.to_sym
157
163
  end
@@ -172,9 +178,12 @@ class CArray::Serializer # :nodoc:
172
178
  ca.mask = 0
173
179
  ca.mask.load_binary(@io)
174
180
  end
175
- if has_attr == 1
181
+ if has_attr
176
182
  ca.attribute = Marshal.load(@io)
177
183
  end
184
+ if has_data_class
185
+ ca.data_class = Kernel.const_get(Marshal.load(@io))
186
+ end
178
187
  return ca
179
188
  end
180
189
 
@@ -3,10 +3,8 @@
3
3
  # carray/string.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,19 +3,17 @@
3
3
  # carray/struct.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
  #
13
11
  # The data class for fixed length carray are required to satisfy only
14
- # four conditions.
12
+ # five conditions.
15
13
  #
16
14
  # * constant data_class::DATA_SIZE -> integer
17
- # * constant data_class::MEMBERS -> array of string
18
15
  # * constant data_class::MEMBER_TABLE -> hash
16
+ # * constant data_class::MEMBERS -> array (MEMBER_TABLE.keys as usual)
19
17
  # * method data_class.decode(data) -> new data_class object
20
18
  # * method data_class#encode() -> string
21
19
  #
@@ -3,10 +3,8 @@
3
3
  # carray/test.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -41,16 +39,13 @@ class CArray
41
39
 
42
40
  # Returns the array eliminated all the duplicated elements.
43
41
  def uniq
44
- ary = to_a.uniq
42
+ ary = flatten.to_a.uniq
45
43
  if has_mask?
46
44
  ary.delete(UNDEF)
47
45
  end
48
- if has_data_class?
49
- return CArray.new(data_class, [ary.length]) { ary }
50
- else
51
- return CArray.new(data_type, [ary.length], :bytes=>bytes) { ary }
52
- end
46
+ out = CArray.new(data_type, [ary.length], :bytes=>bytes) { ary }
47
+ out.data_class = data_class if has_data_class?
48
+ return out
53
49
  end
54
50
 
55
-
56
51
  end
@@ -3,10 +3,8 @@
3
3
  # carray/time.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10
 
@@ -3,10 +3,8 @@
3
3
  # carray/composition.rb
4
4
  #
5
5
  # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
6
  #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
7
+ # Copyright (C) 2005-2020 Hiroki Motoyoshi
10
8
  #
11
9
  # ----------------------------------------------------------------------------
12
10