carray 1.3.3 → 1.4.0

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Files changed (97) hide show
  1. checksums.yaml +4 -4
  2. data/README.md +0 -7
  3. data/Rakefile +31 -0
  4. data/carray.gemspec +9 -14
  5. data/carray.h +4 -0
  6. data/carray_access.c +50 -8
  7. data/carray_conversion.c +3 -3
  8. data/carray_generate.c +67 -1
  9. data/carray_math.rb +22 -22
  10. data/carray_operator.c +23 -0
  11. data/devel/im2col.rb +17 -0
  12. data/ext/calculus/carray_calculus.c +235 -95
  13. data/ext/calculus/carray_interp.c +3 -1
  14. data/ext/calculus/lib/math/calculus.rb +4 -4
  15. data/lib/carray.rb +32 -1
  16. data/lib/carray/autoload/autoload_base.rb +0 -4
  17. data/lib/carray/autoload/autoload_gem_cairo.rb +9 -0
  18. data/lib/carray/autoload/autoload_gem_ffi.rb +9 -0
  19. data/lib/carray/autoload/autoload_gem_gnuplot.rb +2 -0
  20. data/lib/carray/autoload/autoload_gem_io_csv.rb +14 -0
  21. data/lib/carray/autoload/autoload_gem_io_pg.rb +6 -0
  22. data/lib/carray/autoload/autoload_gem_io_sqlite3.rb +12 -0
  23. data/lib/carray/autoload/autoload_gem_narray.rb +10 -0
  24. data/lib/carray/autoload/autoload_gem_numo_narray.rb +14 -0
  25. data/lib/carray/autoload/autoload_gem_opencv.rb +16 -0
  26. data/lib/carray/autoload/autoload_gem_rmagick.rb +23 -0
  27. data/lib/carray/autoload/{autoload_graphics_zimg.rb → autoload_gem_zimg.rb} +0 -0
  28. data/lib/carray/base/autoload.rb +47 -5
  29. data/lib/carray/base/basic.rb +70 -6
  30. data/lib/carray/base/math.rb +1 -1
  31. data/lib/carray/base/string.rb +242 -0
  32. data/lib/carray/base/struct.rb +4 -4
  33. data/lib/carray/io/table.rb +1 -0
  34. data/mkmath.rb +12 -2
  35. data/version.h +5 -5
  36. metadata +48 -141
  37. data/Gemfile +0 -8
  38. data/Gemfile.lock +0 -33
  39. data/ext/calculus/lib/autoload/autoload_math_calculus.rb +0 -2
  40. data/ext/fortio/extconf.rb +0 -3
  41. data/ext/fortio/lib/carray/autoload/autoload_fortran_format.rb +0 -5
  42. data/ext/fortio/lib/carray/io/fortran_format.rb +0 -43
  43. data/ext/fortio/lib/fortio.rb +0 -3
  44. data/ext/fortio/lib/fortio/fortran_format.rb +0 -605
  45. data/ext/fortio/lib/fortio/fortran_format.tab.rb +0 -536
  46. data/ext/fortio/lib/fortio/fortran_format.y +0 -215
  47. data/ext/fortio/lib/fortio/fortran_namelist.rb +0 -151
  48. data/ext/fortio/lib/fortio/fortran_namelist.tab.rb +0 -470
  49. data/ext/fortio/lib/fortio/fortran_namelist.y +0 -213
  50. data/ext/fortio/lib/fortio/fortran_sequential.rb +0 -345
  51. data/ext/fortio/ruby_fortio.c +0 -182
  52. data/ext/fortio/test/test_H.rb +0 -5
  53. data/ext/fortio/test/test_T.rb +0 -7
  54. data/ext/fortio/test/test_fortran_format.rb +0 -86
  55. data/ext/fortio/test/test_namelist.rb +0 -25
  56. data/ext/fortio/test/test_namelist_write.rb +0 -10
  57. data/ext/fortio/test/test_sequential.rb +0 -13
  58. data/ext/fortio/test/test_sequential2.rb +0 -13
  59. data/ext/fortio/work/test.rb +0 -10
  60. data/ext/fortio/work/test_e.rb +0 -19
  61. data/ext/fortio/work/test_ep.rb +0 -10
  62. data/ext/fortio/work/test_parse.rb +0 -12
  63. data/ext/imagemap/carray_imagemap.c +0 -495
  64. data/ext/imagemap/doc/call_graph.dot +0 -28
  65. data/ext/imagemap/draw.c +0 -567
  66. data/ext/imagemap/extconf.rb +0 -13
  67. data/ext/imagemap/lib/autoload/autoload_graphics_imagemap.rb +0 -1
  68. data/ext/imagemap/lib/graphics/imagemap.rb +0 -273
  69. data/ext/imagemap/lib/image_map.rb +0 -4
  70. data/ext/imagemap/test/swath_index.rb +0 -83
  71. data/ext/imagemap/test/swath_warp.rb +0 -99
  72. data/ext/imagemap/test/test.rb +0 -23
  73. data/ext/imagemap/test/test_image.rb +0 -42
  74. data/ext/imagemap/test/test_line.rb +0 -14
  75. data/ext/imagemap/test/test_rotate.rb +0 -17
  76. data/ext/imagemap/test/test_triangle.rb +0 -20
  77. data/ext/imagemap/test/test_warp.rb +0 -26
  78. data/ext/mathfunc/lib/autoload/autoload_math_mathfunc.rb +0 -1
  79. data/ext/mathfunc/lib/math/mathfunc.rb +0 -15
  80. data/ext/narray/README +0 -22
  81. data/ext/narray/ca_wrap_narray.c +0 -500
  82. data/ext/narray/carray_narray.c +0 -21
  83. data/ext/narray/extconf.rb +0 -57
  84. data/ext/narray/lib/autoload/autoload_math_narray.rb +0 -1
  85. data/ext/narray/lib/autoload/autoload_math_narray_miss.rb +0 -11
  86. data/ext/narray/lib/math/narray.rb +0 -17
  87. data/ext/narray/lib/math/narray_miss.rb +0 -45
  88. data/lib/carray/autoload/autoload_graphics_gnuplot.rb +0 -2
  89. data/lib/carray/autoload/autoload_io_csv.rb +0 -14
  90. data/lib/carray/autoload/autoload_io_pg.rb +0 -6
  91. data/lib/carray/autoload/autoload_io_sqlite3.rb +0 -12
  92. data/lib/carray/graphics/gnuplot.rb +0 -2131
  93. data/lib/carray/graphics/zimg.rb +0 -296
  94. data/lib/carray/io/csv.rb +0 -572
  95. data/lib/carray/io/pg.rb +0 -101
  96. data/lib/carray/io/sqlite3.rb +0 -215
  97. data/mkmf.log +0 -18
@@ -1,213 +0,0 @@
1
- # ----------------------------------------------------------------------------
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- #
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- # carray/io/fortran_namelist.y
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- #
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- # This file is part of Ruby/CArray extension library.
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- # You can redistribute it and/or modify it under the terms of
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- # the Ruby Licence.
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- #
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- # Copyright (C) 2005 Hiroki Motoyoshi
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- #
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- # ----------------------------------------------------------------------------
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-
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- #
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- # racc fortran_namelist.y -> fortan_namelist.tab.rb
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- #
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-
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- class FortranNamelistParser
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-
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- prechigh
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- left COMMA
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- left ','
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- left '='
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- preclow
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-
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- rule
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-
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- namelist_all :
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- namelist
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- | namelist namelist_all
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-
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- namelist :
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- header paramlist tailer
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- { @root[val[0]] = val[1]; @scan.in_namelist = false }
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-
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- header :
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- '&' IDENT { result = val[1].downcase }
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- | '$' IDENT { result = val[1].downcase }
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-
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- tailer :
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- '$'
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- | '&'
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- | '/'
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- | '&' IDENT { on_error unless val[1] =~ /\Aend\Z/i }
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- | '$' IDENT { on_error unless val[1] =~ /\Aend\Z/i }
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-
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- paramlist:
47
- paramdef { result = [val[0]] }
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- | paramlist paramdef
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- { result = val[0] + [val[1]] }
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- | paramlist COMMA paramdef
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- { result = val[0] + [val[2]] }
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- | paramlist COMMA
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- { result = val[0] }
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-
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- paramdef:
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- IDENT '=' rvalues
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- { result = ParamDef.new(val[0].downcase.intern, nil, val[2]) }
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- | IDENT '(' array_spec ')' '=' rvalues
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- { result = ParamDef.new(val[0].downcase.intern, val[2], val[5]) }
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-
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- rvalues :
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- abbreb { result = val[0] }
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- | rvalues abbreb
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- { result = val[0] + val[1] }
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- | rvalues NIL
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- { result = val[0] + [nil] }
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- | rvalues ',' abbreb
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- { result = val[0] + val[2] }
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- | IDENT
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- { result = val[0] }
71
-
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- abbreb :
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- constant { result = [val[0]] }
74
- | DIGITS '*' constant
75
- { result = [val[2]] * val[0] }
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-
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- constant :
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- STRING
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- | DIGITS
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- | FLOAT
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-
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- array_spec :
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- DIGITS { result = [val[0]-1] }
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- | DIGITS ':' DIGITS
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- { result = [(val[0]-1)..(val[2]-1)] }
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- | DIGITS ',' array_spec
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- { result = [val[0]-1] + val[2] }
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- | DIGITS ':' DIGITS ',' array_spec
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- { result = [(val[0]-1)..(val[2]-1)] + val[4] }
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-
91
- end
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-
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- ---- inner
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-
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- def parse (str)
96
- @scan = FortranNamelistScanner.new(str)
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- @root = {}
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- do_parse
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- return @root
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- end
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-
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- def next_token
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- return @scan.yylex
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- end
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-
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- ---- header
107
-
108
- require "strscan"
109
- require "stringio"
110
-
111
- class FortranNamelistScanner
112
-
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- def initialize (text)
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- @s = StringScanner.new(text)
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- @in_namelist = false
116
- end
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-
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- attr_accessor :in_namelist
119
-
120
- def yylex
121
- while @s.rest?
122
- unless @in_namelist
123
- case
124
- when @s.scan(/\A([\$&])/) ### {$|&}
125
- @in_namelist = true
126
- return [
127
- @s[0],
128
- nil
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- ]
130
- when @s.scan(/\A[^\$&]/)
131
- next
132
- end
133
- else
134
- case
135
- when @s.scan(/\A[+-]?(\d+)\.(\d+)?([ED][+-]?(\d+))?/i) ### float
136
- return [ ### 1.2E+3, 1.E+3, 1.2E3
137
- :FLOAT, ### 1.2, 1.
138
- @s[0].sub(/D/i,'e').sub(/\.e/,".0e").to_f
139
- ]
140
- when @s.scan(/\A[+-]?\.(\d+)([ED][+-]?(\d+))?/i) ### float
141
- return [ ### .2E+3, -.2E+3, .2E3
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- :FLOAT, ### .2, -.2
143
- @s[0].sub(/D/i,'e').sub(/\./, '0.').to_f
144
- ]
145
- when @s.scan(/\A[+-]?(\d+)[ED][+-]?(\d+)/i) ### float
146
- return [ ### 12E+3, 12E3, 0E0
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- :FLOAT,
148
- @s[0].sub(/D/i,'e').to_f
149
- ]
150
- when @s.scan(/\A[\-\+]?\d+/) ### digits
151
- return [
152
- :DIGITS,
153
- Integer(@s[0])
154
- ]
155
- when @s.scan(/\A'((?:''|[^'])*)'/) ### 'quoted string'
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- return [
157
- :STRING,
158
- @s[1].gsub(/''/, "'")
159
- ]
160
- when @s.scan(/\A"((?:""|[^"])*)"/) ### 'double-quoted string'
161
- return [
162
- :STRING,
163
- @s[1].gsub(/""/, '"')
164
- ]
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- when @s.scan(/\A,/) ### ,
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- @s.scan(/\A\s+/)
167
- while @s.scan(/\A\n\s*/) or @s.scan(/\A\![^\n]*/)
168
- ### skip comment
169
- end
170
- if @s.match?(/\A[a-z]\w*/i) or @s.match?(/\A[\&\$\/\!]/)
171
- return [
172
- :COMMA,
173
- nil
174
- ]
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- elsif @s.match?(/\A,/)
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- return [
177
- :NIL,
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- nil
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- ]
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- else
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- return [
182
- ',',
183
- nil
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- ]
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- end
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- when @s.scan(/\A[\$&\/=\(\):*]/) ### {$|&|/|,|=|(|)|:|*}
187
- return [
188
- @s[0],
189
- nil
190
- ]
191
- when @s.scan(/\A[a-z]\w*/i) ### IDENT
192
- return [
193
- :IDENT,
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- @s[0]
195
- ]
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- when @s.scan(/\A\s+/) ### blank
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- next
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- when @s.scan(/\A![^\n]*?\n/) ### comment
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- next
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- when @s.scan(/\A\n/) ### newline
201
- next
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- else
203
- @s.rest =~ /\A(.*)$/
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- raise "FortranFormat parse error\n\t#{$1}\n\t^"
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- end
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- end
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- end
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- end
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-
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- end
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-
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- ---- footer
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-
@@ -1,345 +0,0 @@
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- # ----------------------------------------------------------------------------
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- #
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- # fortio/fortran_sequential.rb
4
- #
5
- # This file is part of Ruby/CArray extension library.
6
- # You can redistribute it and/or modify it under the terms of
7
- # the Ruby Licence.
8
- #
9
- # Copyright (C) 2005 Hiroki Motoyoshi
10
- #
11
- # ----------------------------------------------------------------------------
12
- #
13
- #
14
- # Format
15
- #
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- # real*4 : native endian => "f", "F"
17
- # little endian => "e"
18
- # big endian => "g"
19
- #
20
- # real*8 : native endian => "d", "D"
21
- # little endian => "E"
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- # big endian => "G"
23
- #
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- # integer*2 : native endian => "s"
25
- # little endian => "v"
26
- # big endian => "n"
27
- #
28
- # integer*4 : native endian => "l"
29
- # little endian => "V"
30
- # big endian => "N"
31
- #
32
- # character : "a"
33
- #
34
-
35
- require "stringio"
36
- require "carray"
37
-
38
- class FortranSequential
39
-
40
- if "ab".unpack("v").pack("s") == "ab"
41
- ENDIAN = "little"
42
- else
43
- ENDIAN = "big"
44
- end
45
-
46
- FMT_VAX = {
47
- "f" => "e", "F" => "e", "e" => "e", "g" => "g",
48
- "d" => "E", "D" => "E", "E" => "E", "G" => "G",
49
- "s" => "v", "v" => "v", "n" => "n",
50
- "l" => "V", "V" => "V", "N" => "N",
51
- "a" => "a"
52
- }
53
-
54
- FMT_NET = {
55
- "f" => "g", "F" => "g", "e" => "e", "g" => "g",
56
- "d" => "G", "D" => "G", "E" => "E", "G" => "G",
57
- "s" => "n", "v" => "v", "n" => "n",
58
- "l" => "N", "V" => "V", "N" => "N",
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- "a" => "a"
60
- }
61
-
62
- def self.open (file, mode="r", opt={:endian=>nil})
63
- io = Kernel::open(file, mode)
64
- if mode =~ /r/
65
- fs = FortranSequentialReader.new(io, opt)
66
- else
67
- fs = FortranSequentialWriter.new(io, opt)
68
- end
69
- if block_given?
70
- begin
71
- yield(fs)
72
- ensure
73
- fs.close
74
- end
75
- else
76
- return fs
77
- end
78
- end
79
-
80
- def get_pack_fmt (endian)
81
- case endian
82
- when "big"
83
- return FMT_NET
84
- when "little"
85
- return FMT_VAX
86
- else
87
- raise "unknown endian '#{endian}'"
88
- end
89
- end
90
-
91
- class Record
92
-
93
- def initialize (data="", endian="little", fmt=nil)
94
- @io = StringIO.new(data)
95
- @fmt = fmt
96
- @endian = endian
97
- end
98
-
99
- def to_s
100
- return @io.string
101
- end
102
-
103
- def empty?
104
- return @io.eof?
105
- end
106
-
107
- def rest?
108
- return (not @io.eof?)
109
- end
110
-
111
- def read (*fmts)
112
- out = []
113
- while not fmts.empty?
114
- case fmt = fmts.shift
115
- when String
116
- list = []
117
- specs = fmt.scan(/(?:\d+|)(?:a\[\d+\]|\w)/)
118
- while not specs.empty?
119
- case specs.shift
120
- when /(\d+)?a\[(\d+)\]/
121
- ($1||1).to_i.times do
122
- list.push(*@io.read($2.to_i).unpack("a#{$2}"))
123
- end
124
- when /(\d+)?a/
125
- ($1||1).to_i.times do
126
- list.push(*@io.read(1).unpack("a"))
127
- end
128
- when /(\d+)?([dDEG])/
129
- ($1||1).to_i.times do
130
- list.push(*@io.read(8).unpack(@fmt[$2]))
131
- end
132
- when /(\d+)?([lNVefFg])/
133
- ($1||1).to_i.times do
134
- list.push(*@io.read(4).unpack(@fmt[$2]))
135
- end
136
- when /(\d+)?([nsv])/
137
- ($1||1).to_i.times do
138
- list.push(*@io.read(2).unpack(@fmt[$2]))
139
- end
140
- else
141
- raise "invalid format for FortranSequential::Record#read"
142
- end
143
- end
144
- if list.size == 1
145
- out.push(list.first)
146
- else
147
- out.push(list)
148
- end
149
- when Integer
150
- n, tmpl = fmt, fmts.shift
151
- n.times do
152
- out.push(tmpl.template.load_binary(@io))
153
- end
154
- when CArray
155
- tmpl = fmt
156
- if ENDIAN == @endian
157
- out.push(tmpl.template.load_binary(@io))
158
- else
159
- out.push(tmpl.template.load_binary(@io).swap_bytes!)
160
- end
161
- when CA::Struct
162
- if ENDIAN == @endian
163
- out.push(CScalar.new(fmt.class).load_binary(@io)[0])
164
- else
165
- out.push(CScalar.new(fmt.class).load_binary(@io).swap_bytes![0])
166
- end
167
- when Class
168
- if fmt < CA::Struct
169
- if ENDIAN == @endian
170
- out.push(CScalar.new(fmt).load_binary(@io)[0])
171
- else
172
- out.push(CScalar.new(fmt).load_binary(@io).swap_bytes![0])
173
- end
174
- else
175
- raise "invlaid argument (format string or CArray)"
176
- end
177
- else
178
- raise "invlaid argument (format string or CArray)"
179
- end
180
- end
181
- if out.size == 1
182
- return out.first
183
- else
184
- return out
185
- end
186
- end
187
-
188
- def write (*fmts)
189
- while fmt = fmts.shift
190
- if fmt.is_a?(String)
191
- argv = fmts.shift
192
- unless argv.is_a?(Array)
193
- raise "argv should be array"
194
- end
195
- argv = argv.clone
196
- end
197
- case fmt
198
- when String
199
- specs = fmt.scan(/(?:\d+|)(?:a\[\d+\]|\w)/)
200
- while not specs.empty?
201
- case specs.shift
202
- when /(\d+)?a\[(\d+)\]/
203
- ($1||1).to_i.times do
204
- @io.write [argv.shift].pack("a#{$2}")
205
- end
206
- when /(\d+)?([adDEGefFglNVnsv])/
207
- ($1||1).to_i.times do
208
- @io.write [argv.shift].pack(@fmt[$2])
209
- end
210
- else
211
- raise "invalid format for FortranSequential::Record#write"
212
- end
213
- end
214
- when CArray
215
- if ENDIAN == @endian
216
- fmt.dump_binary(@io)
217
- else
218
- fmt.swap_bytes.dump_binary(@io)
219
- end
220
- when CA::Struct
221
- if RUBY_VERSION.to_f >= 1.9
222
- if ENDIAN == @endian
223
- @io.write fmt.encode.force_encoding("ASCII-8BIT")
224
- else
225
- @io.write fmt.swap_bytes.encode.force_encoding("ASCII-8BIT")
226
- end
227
- else
228
- if ENDIAN == @endian
229
- @io.write fmt.encode
230
- else
231
- @io.write fmt.swap_bytes.encode
232
- end
233
- end
234
- else
235
- raise "invlaid argument (format string or CArray)"
236
- end
237
- end
238
- end
239
-
240
- end
241
-
242
- def eof?
243
- return @io.eof?
244
- end
245
-
246
- end
247
-
248
- class FortranSequentialReader < FortranSequential
249
-
250
- def initialize (io, opt={:endian=>nil})
251
- @io = io
252
- @endian = opt[:endian] || ENDIAN
253
- @fmt = get_pack_fmt(@endian)
254
- end
255
-
256
- def record (n=nil)
257
- if n
258
- @io.rewind
259
- skip(n)
260
- end
261
- data = read
262
- if data
263
- rec = FortranSequential::Record.new(data, @endian, @fmt)
264
- if block_given?
265
- return yield(rec)
266
- else
267
- return rec
268
- end
269
- else
270
- return nil
271
- end
272
- end
273
-
274
- def skip (n=1)
275
- n.times do
276
- unless @io.eof?
277
- length = @io.read(4).unpack(@fmt["l"]).first
278
- @io.pos += length
279
- if length != @io.read(4).unpack(@fmt["l"]).first
280
- raise "invalid record length (should be #{length})"
281
- end
282
- end
283
- end
284
- end
285
-
286
- def read (*dummy)
287
- if @io.eof?
288
- return nil
289
- else
290
- length = @io.read(4).unpack(@fmt["l"]).first
291
- data = @io.read(length)
292
- if data.length != length
293
- raise "record too short (record length should be #{length})"
294
- end
295
- if length != @io.read(4).unpack(@fmt["l"]).first
296
- raise "mismatched record length (should be #{length})"
297
- end
298
- return data
299
- end
300
- end
301
-
302
- def close
303
- @io.close
304
- end
305
-
306
- end
307
-
308
- class FortranSequentialWriter < FortranSequential
309
-
310
- def initialize (io, opt={:endian=>nil})
311
- @io = io
312
- @endian = opt[:endian] || ENDIAN
313
- @fmt = get_pack_fmt(@endian)
314
- end
315
-
316
- def record
317
- rec = FortranSequential::Record.new("", @endian, @fmt)
318
- if block_given?
319
- return yield(rec)
320
- else
321
- return rec
322
- end
323
- end
324
-
325
- def write (data)
326
- if data.respond_to?(:to_s)
327
- data = data.to_s
328
- end
329
- if RUBY_VERSION.to_f >= 1.9
330
- data = data.force_encoding("ASCII-8BIT")
331
- end
332
- @io.write [data.length].pack(@fmt["l"])
333
- @io.write data
334
- @io.write [data.length].pack(@fmt["l"])
335
- end
336
-
337
- def close
338
- @io.close
339
- end
340
-
341
- end
342
-
343
- def fortran_sequential_open (file, mode="r", opt={:endian=>nil}, &block)
344
- return FortranSequential.open(file, mode, opt, &block)
345
- end